Contig Data
morexGenes
Links



Map Locations of contig_137615 (6519 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137615

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6480 4 3356 bp AK360389 Available Available None
MLOC_6479 1 655 bp None Available Available None





CDS Structure of MLOC_6480






CDS Structure of MLOC_6479






Contig Sequence (6519 bp)

>contig_137615 6519 assembly3_WGSMorex_rbca.fasta
CATCAGCCCAGCCAGGCTAGACTCAGGGCAAACCATTCATGCGATGCAGTGTGAAACTAC
ACAGGCAACCAAACACACCCTAAGAGTAGCTCCCATTGAAAATTCAAGACACGAAATCCG
CAATGCGCATACAAGATTCATCGTCGTCGTCGTCGTCATCATCCATCTACAGGCAAAACA
TAACTCCCAAGACACTCTAATACAAACCTGTCGAATGGCCGTCCATTTCGCTACCCTCTG
CTACCACTACTACAGCTACCGGAATGAAAAACTAGACAAGTTCCAACATGATTGCGCAAG
ACCAGGAACAACAAAATGTAAAACACAAGAGGGTCATCAACTGAAGGAGCTCCATAACAT
GTGGATGAAGTAGCACGCTCCCAACCGTCAAAACTAGACAGTCGATCTTCTTGCTCTACA
GAATCTTGAAGAGGATTCCTCCATAGGTGGCGAAGAAGGGGGCGAACACGAGGGACTCAA
CCGCCATGAGCTTGATGAGGATGTTGAGCGAGGGGCCCGAGGTGTCCTTGAGAGGGTCCC
CGATGGTGTCACCGATCACGGCGGCCTTGTGGCAGTCAGAGCCTTTCGGGCCCAGGCTCT
TTGCATGCTCAGATGCGCCAGCCTAAAACAAAGGAAACCCACAGTTAATCAATTTTGGCA
AAGGTCTTCCTGACTAATGAGTGTTACTGAAGTAAAAGGATTTTTACCTCAATGTACTTC
TTGGCGTTGTCCCATGCACCACCGGTGTTCGATGCCGAAATGGCAATCTGCATAGAAACA
ACACAGTTCTGAGTGAAACATCACGTATTTATGAATGCAACATCCAGCGAAAATACAATG
CCAAGTATAATCCCGAAAACAGAATGTTCCACAAACCTGAACACCAGAAACCAGAGCACC
GGCAAGGACACCAGAGAGGGTCTCAACACCAAATAAGGTCCCAACAATGAGTGGTGTGAG
CATGACAAGAGCACCCGGTGGGATCATCTCCTTGATGGACGCATCAGTGGAGATCTTCAC
ACATGTCGCATAGTCGGGCTTGGCGGTGCCCTCCATGAGCCCAGGGATGGTGTTGAACTG
CCTCCGCACTTCCTCCACCATCTTGAGAGCCGCACTTCCAACACTTTTCATGGTCATTGC
AGAGAACCAGTATGGGAGCATGGCGCCAACAAGGAGCCCAATAAAGACATTAGGTGTCAG
GACATCAACGGTCGTGATCCCAGCACGGCTCACAAAGGCACCAAAGAGAGCAAGGGACAC
CAAGGCAGCCGAGCCAATTGCAAAGCCCTACAGGTGAAGATCATGGTAAACAGAATCTAG
TAGTTTGAAATGAAATTTGTTGAAAGAATTATGACTGAAGAAATATTCGGTAGAGTATTG
AAGTTACAGCGGAATGCACTTCCTTGAATGTGATATAAAGGTCATTCAGCTCTCAAATCA
AAGACAGCAAACAAGTTAAGATTTTATACCTTTCCAATGGCAGCAGTTGTGTTTCCTGCA
GCATCGAGAGCATCAGTTCTTTCACGAATTCTGTGGCTCATGCCAGCCATTTCAGCAATG
CCTCCAGCGTTGTCACTGATAGGGCCATAGGCATCAATGGCAAGACCAGTAGCAATTGTG
CTGAGCATTCCAAGAGCAGCCACAGCAACACCATACATCGCAGCAAGGCTGAAGCTGAGG
AAAATACTGAAGGCAATGGCAAAGATAGGGATAATAACTGATTTGTATCCCAGAGCAAGA
CCAAAGATGACATTGGTAGCAGCTCCAGTTCTGCAGGAATCGGCGACATCCTGCACAGGA
CTGAAATGGTCGAACTGTCAGGAACTTGAAACTCACGATGTTGATTACAGCAACTACTAA
ATATATCGCCAAAATTGCAAGTACCTGTATGCATTGCTTGTGTAGTACTCTGTAATGAAT
CCAATGACTAGGCCAGCCCAGAGACCAACAGCCACACACAAAAATAGTTGCCTGTAAAAT
TTAAGGGGAGGTGAGATCATGAATTTAATGAGCAAGGTCTGAACAAAATTATATAAATAA
GAATTAGAAAGATGGCGATACCAGCTATGCACAGTCTTCTGGGCACCAAAGTTGAATATT
GTGAAGGTATATGGGAGACCCAACCAACTGACTAGTGCAATGCCAATGGTCATCACAGCA
GTGGAGATTATAAGCTGCCTTTTTAGGGCAGGCTCTATTTGATCTACCTCCTTCACCTCA
AAGAAATCAGTTGCAAAAAGAGTTGTTATCAAACAGGCTATTATACCCACTGAGCTGATT
AGGAGTGGGTACATCATGGGGGTGAATTCATGGTTAATTCCAAAGGAAGAGATTGAGGCA
ACAACAAGAGCAGCACAAGATGACTCGGCATAGGAACCAAAGAGATCTGAACCCATTCCA
GCAATATCTCCAACATTGTCACCAACATTGTCTGCAATGACCTGTATGAAGGAAGGAATG
ATCAAATTCACGTACAGATAAAAAACGCCTATCAAAATATTAGTACTCTGCTCGGCAATA
GAAGATAAGACACTTACAGCTGGGTTCCTCGGGTCATCCTCAGGGATGTTCCTTTCTACT
TTCCCAACAAGATCAGCACCAACATCAGCAGCTTTGGTGTAAATCCCACCGCCTACACGG
CCAAAAAGAGCCATGGAAGAACCGCCGAGACCATAACCGGTGATAGCCTCGAATAGACCC
TCCCAGTCATCACCATAATAAAGCCCAAACAGGTTGATTGCAACGTAAAGAACAAAAAGG
CCACTTGCAGCAAGAAGGAAGCCCATCACGGCACCAGAGCGGAAAGCGGTGATGAACGCC
TTCCCAACACCCTTCCTTGCCTCGAGAGTTGTCCTGGCATTCGCATAGGTCGCAATCTTC
ATTCCAAGGAAACCAGACACAAGAGAGGTGACCGCACCTAGCACAAAGGCAATTGTGCTG
AAGGCAGCATTAGCAAGAGCAGGCTTGCATGTCTTGCCCACGCTGTAATGGCAAGGCTGG
CTCTTTGTGCTGAACCCCTCGATGGAGCCAAGGAAGACGAAGATCAGGACCGCGAAAATG
GTCATGAATCCTCCGGCATACTTGTATTCAGTGAAAAGGAAGGAGGTTGCTCCTGTTTAC
AAGCAAGCAAGAGTAGTTAGACCACAAATGCATATACAACAAAGGTAGATACTGAACATT
TTCAAGAGGAAGAAGTTTATCAGTAATAAAACATGGACGCAAATACAAAATAACAAAGGT
GGGACCAATGGCAATGAACTGTGGCGCACATCAGCTCCAAGGTGCTGTGAACCATACAGC
AATCTGTCAGCAAGGAATGCTGGCCTTTAATCAAAAAAAAAAATGACCTTGACCTGACCC
AACACATATTCTTAGATAATACTTAACCCTATTTTTAGTTAACCCTGTCAAGATCTTAAA
ACAAACTTATACTCCCTCTGTACCTAAATAATTGTAGTTGGGAAGATCATTAATAATATA
GACCAGCTAACAACAACACGGGAGCCTTGTGCAAATACAGAGTACTAAAATCAGCAACAC
CTAACATTCCTCCCCAACTGCCTTTGCACGAAACAGTGATGAGCGGGGCAAGAACATCGG
GCCCAACCATGTGCGCTCCTAGGATTCCTCCAAGTTAACAAGCATAAACATGAATATGCA
TGTGCGGAAGCTAATTACAGCATGCTACAATAATGCGGGTACGCAGAAAATTCGTCGCCT
TGCCTTAAGATGGCAGCTGGGAGGACCGCGGTTGCAATAACGTGTCCTCTTCTTCATGCA
GTTATAACTTATCCTATCTACGAATCTATCCCTGCAGGGCAGCTGGGCTTTGTAGTGATC
GGGACCTCACTTCTCTCTCAGGCAAGAACACATCACTTGTGGAGTAGTCCTCTTTTCTTT
TCGAAGCTGAACAATAATAATAATAAAAAACTTGTGATTTACAGTGTCAACCATCCCCAC
AGGCAGATCTGCATCCCCACTCGTTCCCACGAGAAATATCTCCAGGGAAGAAAAATCCTG
TCGGGAGCGACGGATGGTTGGTTAATTAATTTGACCACGATTAGCGCACGCTGAAGCAAG
GATTATTATAACGCGTGCTGCGCAAAGCGGGGACAATCGATACTATAATGTCTGCTGGCA
GTCGCAGATCCACCCCTAAAGCGCAGGGTGATGCTGGGATAACAGTCGATGCAAGTACTT
ACATAAACAAGCACAGAATAAATTCAGAAACAACAGTGAGACTCGGTGAAACAGCAGTGC
AGAATTACGAATCCATGCATCAAAAGTATGAAATTGTTGATGCACAACGCATGAAAATAT
GAAATTACTGCTAGACAAGACACCATCTAGTATGCTGGATTAGGATGCTACCTCACACGC
TACGCGCCGCGGCGGATTCGAACAGGCAAAGTAAGTTTCTGACCGGCAAGCCGCAAGCGA
ACAAAGCAGTCAAACCGGCAGAGAAACTAGTATCGGCCGGTTCCTGCGCGCTCGGAAGGC
CGGAGCCCGCGCCGACATGGCCGAGATCTACCTGCCCAACATCGGATCGATTCGATCCAC
GCCCGGCCCGCCGGCGAGCGGAGCGCGAACCAGTAGCTACGACCGCCGAGAAAGAACCGT
GTGTGGGGGGGTGCGTGTCTCACCTTCGGAGATGGCGGTCTGGATCTCGGCGCACTTGAG
GACGACGTTGTGGTCGTTGAGGCCCTCCTCCTCCTCGATGAGGTACTCGGTGGCGCCGTC
CTTGCCGCCGGCGGCGGAGGCCGACCCTCCCTCGGCGCGCGGCTCGGGGGCGACCTTGAC
CTTGGAGACGAGCACCCACTGCAGCACCGCGAAGGCGATGCCGACCGCCGCCGCCACCGG
CACCACGAGCTGCGTGGCCAGCTCCGGCAGGATCGCCGCCGCCACCATCTCCGCCACTGA
GATCAGTACGCTGGCTTCGTCCCGGTGGTTCGTCCCGTTCCCCCACCTTCCGCGGAGGAT
TAGGTAGCACGAGAGAGGGGAGGGAGGGATGGAGGGAGGGAGGGAGGAGACCGGAGAGGA
GCGCAGGTGAGGGAAGCGGCGGTTTTTATAAGCGGAGCGGAGAGGAGAGGGAGGCCGGGA
GTGGGGAGAGGAAGAGGACGGAGTGTAGGCGGTGACGTGGAGGCTTCACGAGGGCAGTTC
CGTGATTCCTGGGGTCTTTGGCCTATCCATCTATCTTCTGTTTCAACTTCCTCCCTGGTC
AAGAGGGTGAAATGAACCTTCCTCCGACTCAATCAGGATCTTGAATCTTCTATCCGTTTT
TTCCTTCTTTCATATGCTCCTGGTCAAGAGGGAGTGCAAGCTTTGCTCTGGATAAAAACG
TAGTAGTGAAAAGAGAATGTCCTGCATATTTTGCGTTTTTCCGACATTGTTAATTAGCGG
TTGAAAGTCAAGTTGTTGTTGCTCTGGGTTTCTCAAGGCGGGCGGCGGTGGTCACGCGCC
GTTCATAAAAAGGTCAGGGTCTTGGCTTGATGCCTTGAGTGACTTGCAATGAGGTGGATT
TTTCTTTCGTGACGGACGACGCTTTATTTGCAATGGGAAGATGCGAGGATGGCGTGTATG
GTGTGCATGCGCTATACTGTATTTGGCAGTTGTGAAGGCAAATAATGAATGACAGCTGCG
AGGTCGTAGTAACGCCGGATAGTTGTTGACAGTTGTTGGCCTGATGCACACATACGATGT
TTTGACTTTCGTAGAAGGAATCGAGGAGCAAACTAGTCCATATTAGTTGATCTCATGTTG
TTAGCGGTTAAAAAACATAAGATTCGTTTTCTACTTAGTATCAGTGATTATGCGTTGTTC
ACTCCAGGCTTATAATCTTGGCTTGACATCTTGAGTGCCTCACAAGGAACTAGGATTTTC
TTTCATGTTGAACGGCACGTTGTTGGGGCCAGATAGATGTGGGGACCCCATCGGTCTTCG
GACCTTATGACTCCAGAGAATGGGAGAGCGACGATTATGAAGAAGAAGCAATAATGGATG
CCAACAGTAAGGTTGTAGTAACACCTAGCTTTCTTTGTCGTGACCCTTCGGATAGTTGCT
GACAGTTGTTGCCATGACGCATGTAGACAATCTTTTGACTTTCCTAGAAGGAAGTGAGAG
CAAACACAGTCATATTAGTTGACATTATGTTCTTGGCTGTTAAAAAGCATGTGATTGGTC
TGGTGCTTAGTACCGGTGATTATGTATCGTTCACCCAAGGGTCAAAGTCTTGGCTTTGGC
GTCTCGATACACCCAAGGGTCAAAGTATTGGCTTTTGACGTCTCAAGTGTATTGACAGTG
AGTGGGATTTCTCATCCATGGTGGACGATGCATTGTTAGATATGGGAAGAGGTGGTAACT
TTGCCGGTCTTCAAACCTCACATCTCCCGTGAGTGAGAGAGCGGCGGGTGACGTGTACGC
GTTATACTTGGTGGTTGCAAAAGCAATAATGAATGCCATCTGCGAGACCATAGTAATGTC
TGTCTTTCTTTGCCGTGACCCTTCGGATAGTTGGTGACA