morexGenes - Barley RNA-seq Database

Contig contig_137614
Source Contig contig_137614
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_137614 (7460 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_137614

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_6476	2	2795 bp	MLOC_6476.1	Available	Available	LOC_Os08g39350.1, FRAME:-1, EVALUE:0.0, 13108.m04197 protein glycerophosphoryl diester phosphodiesterase family protein, putative, expressed
MLOC_6477	1	176 bp	None	Available	Available	None
MLOC_6478	1	253 bp	MLOC_6478.1	Available	Available	None
CDS Structure of MLOC_6476

CDS Structure of MLOC_6477

CDS Structure of MLOC_6478

Contig Sequence (7460 bp)

>contig_137614 7460 assembly3_WGSMorex_rbca.fasta
CTTAGCTAAGAGCCCGCTTACCTTCTCTNNNNTCTTCTCTCTCCTCCAACTAAACAAAAA
TATACTATTTTATTCCTTATAGCCAGCTGATTCAGCTCTATTGTACTTGCTCTAAGAGAC
CACACCTACTAACACTGTCGAGATCTTACACCTGAATCTGCAAACATGCACACTTCCCAA
TTTTTCACAGCGCAACACATGCTTTTCAGCTAAGAAGTACTGTAATTCTATACACAACAA
TGGTAGACAGCATCTTCCACCGGTCAGCACTCAGCAATGTAGTACTATGAAATATGAAGC
CCTAAATATAAATCTTTTTAAAGATTTCATTATAAACTACATATGGATGTATATAGGCAT
ACTTTAGACCTAAATTCATCCATTTTGCTCCGAATATAGTCTATAATGCAGTCTCTCTAA
AGATTTATACTTCCTCCTTAAAGTAATATAAGAACGTTTCTAAACGCTCTTATATTACTT
TACAGAGGGAGTATTTAGGAAGGGAGGAAGTTCAACCGAACCTCTTCAATTCAATTGATA
GATCAAATACACCAATGTACCGGAATAGCTACAGAAACGAACGCCCGGTGTATATGTGTG
TATATGTTGCACAAAATAGCAAGATTATAGCTTGCGCAAGTCTAATGGCCCTTCTGGTAA
CTTAACCTACCAGCACACGGCCTCATGGCCTACTGCTCAAAGCAGCAGAGCTGCACAGGC
CGCTACCAGCAGAATGCAGGTGCTTGCAGCTGTTGTGTGAGCGTCAGACGGCGATGAACC
CGGAGGTGGGGCGGCACCAGGAGGTGCATTCTTGGACGCGACAGGCGGGAATGGCGGCTG
CTGCACCTCTGTTGCGTTCAATCCTGGCATCGGTGACACGGTTGGCGGCTGAGCCTGAGG
AACGGCATTTCTCTCGAGTAACTGCGCGAGGCCGCCGACTTCAACGGTCTCCATGTAGGC
GGGCTTGACCTTTTCTGTACATGAATTCCCTGCCAAGACAATATAGCAAAGGTCAAATAC
TGTCGGTCACTTATCCCAAGAAGTTAGTTATGTGAATGTCTAAAATGGTTCAGCAGAGGC
ACCACAACCATCAATATTCCAAATTGGCCTAAACAACTACGCACGGCGTTACCCGCAAAA
AAAAAACTGGGCATGGCGCAATGCTAATTTTCAGGAGCGTGTCTAAAACGTAGGTACAGG
CAGAAAAACATGAATGGAAGATGGCGAATTTTACTTACTCTTGTATCTCCTTACTGTCTT
GGGGAAGTCAGTAATTAAGCCATCGACTTTAAGAGACTGAGCATAGCTATTGATTTCCAC
TGTCTCGTCTGAGAAGAAGTCCCAAGGTTGTGATAGAAACTCATTGCGGAACACCTGCGC
ATATACCGTTAGTCCTGCGGACTGCAGATCTTTCACAAGGCTGGTTTGGTTGATGATAAA
TTGAACACTTGTTGCAAAAAAGGAATTCCTGTCAACGACTACAGCCTCGGCAAACTTCTT
GACATCAGCTAGGGAGGAAGGAGAAGCATCCCCAATGCCTAGCGGGAGAGTGTAAACAAG
CTTGTATTTTGTTTTCTGCTGCTTCAATTTGACAAGAACAGCGCTATCTTTTGACTGGAT
CATGACTTCCTTGGTAGTTTGATTATCATAGCCAGCCTCACTTAAGGCAGTGGTTAAGGA
CTCGAGAACATCAACTCCTAATGACTTCGCCATAAATGCAGCATTCTGCAATACAGAAGA
TATGTTGATCAATTAACAGAGGACTCCACTGATTAAAGCTTTAGAAAATTGCCAGAAATC
TGACTTCTAAGGACTAAATATCCATATGGTAACGCTTGTGAGACAAATATGAGATTTCAG
TAATAACCTTAACAAGGAACACGGTACGAATCACCGCACACATAATAATGAATATAATTA
CACATTATATCAGTATTTGCTATTTCCACGTGTTGCATGTTCAGCACATAATCATGATTC
TCATATTCCTTGCCAATAAGAGAATACATGGTGATGAAATCAGTTAAATAAATTATACTC
CCTCCGTTCCAAAATAAGCGTCGTAGTTTTAGTTTAAATTTGAACTAAAACCACGACACT
TATTTTGGAACGGAGGAAGTACAACTAAGGAAAAGACAAATAAATAAATATAGTATGTTC
CTTAAACTAGAGCTCTCTTTTTTGCATATAAGAAAATCAAATTAGAAGTAGTAAGCATAA
CCTAACGTATTAAACTTGAAGTTACTTCAAGCAGAAGTATCACCTCCACAATAATCATGA
TGCCAGACAAATCCTTATCCTTTCCATATTCCAGAAAGTCTGAGAACTTGACAAACTTCC
CATCATTTGTGTACCTCGGGTTTCTTACAAGATAGTAGCTACTCAATGGGCTAGATATCT
TGGCTGCAGAAAGAGGGCATGTATGAGGACACTACAAGAATTAATCCTTTGTTTTATGTC
ATCCACATACTTCTCAGTTGTTAGCCATCAACTTCCACAGAAAACAACATTAAGAAAAAA
TATCCACGCTGTGATGAAGGAACTCACGTTTCAAAGAACTATCGCTTATGTCGTTCCAAG
TAAGGTTGAATGTAAAAATCCCTGGTGTACTCTTAATTTCAGGAATGACAGATGTACGGG
TACTGAAAGGTGTCATCTGAACATTGGTGGTATCGAGCAGGTTGATGGAACTCATGCAAA
TAAGAACTCCATCTTCTGTCACTTGAAGGGCACAGTCAATCACGTCCGCACCATCTTTAA
TTGCATTCAGGTAGGCAAGATCAGTACAATCCGGATAGTCTCCACTGGCACCATTATGTG
AAATAATTAAAGGTTTCCCTGCAGAGAAACACTGCAACAATTAAGCAGAGTTGAACTTGT
ACTCATCCAAGCATCATTATGGGCAGCAGTACTCGGATTCACGCCTAGATATACATACCA
TGATCCGCTTTACTTTCATTCAAGTGAGTAAAACAGCCTGAAGAGAAGATTCAAATGAAT
TAGCAAAGGGAGAAAACTACATTGCTCATATATTTATACAATTAATAAGTGTTCTGCATT
TTCTTAAACATCCCTTTGATTATTTGATGCATGTTACATTTGTAAAAAAGCCCAATGTTT
CTACTTATCGGCTAAAGGTCTAAAGTTGGATGCCTTAGGGGAAGGCAAGATCAACGAGGA
TGCAGTGCGTTAAACAGAAATGTGTTCAACAGGCGAATGATTGTAATCTAGTTCATTTGC
TTTAATAAGAGATCACAAGTACAAAAGATAAAAGAAAATGACTCACAAGCAAACTCAAAG
ATAAAAAGGCATAAAATTAACTTGTCTACAGCCATAAGTTAGAAACATCTTTTAATCATT
CATAGATATACAAATAAAATGACATGATAAAGAGATGCCAATGCACAGGTATAACACTGT
TTGTCATTGTATATTTACAGAGTTATTCCTCTATCCCTATGCGTTAAGATCTTAGTTAAG
GTTAAAGAAGAAGAAAACATGATGAAGCGGAAAGTCGAAACAACACCGTAGTCAATGATT
TCATAGGTATTCGGTGTAGAAAGAAGTGCAACTAAGTAACCTACCAATAGCCTCAGATGC
AGTAATAGGATAGTCTGTTAACACACCATCCACGGAGAATCCGCCATCACTTATAAATGA
TAGGTATTCTTGCAAGGGATCATAACTGTAGTTATAGGGAATAATCCTATCATTTGCAAA
GTCAGATGCATAAATTTCTAGCCCTGCACTGTGGGCATCTTGTACAAAGGATGTTGGAGG
CTGCAGATAGTTATCATTCGTCACTGGCCAGATGTAGCTCTTCGGGACCATGATACCAGA
AGCAATTGTCTTAATAAACGTTAGGTTCTTGGACAGCAAGCTATAGGTTTGGTTTATAGA
AGGATCAGACATAAAGTTATCAGGAAAGCGAAACACAAGCTTCGTTCTGCTGCCAACTCT
TTTAGATATGCTTTTGAGGAAACCCAACTCAGGTGATGAAATATACTTCACAGAGACACT
CTTTAGGATGGAAACAATGTATCTTCTCATGTTCAAACCATGTTGCGTATAGAAGATGTC
ACGCTACACATATGAAGAAGAAGTTAGTTCTTAAGGGATTCGACAAAGAAGTAGCAACAG
TAGCAGATAAAGGCAAAATGGCAAGAACAGTAAATTTAACCTGAACATTCAACCAAACCG
AAGGCGGCTTGATATAGGACTGCAAGTCTGTCACAGAAAAGATAGTATATATGGAATCAA
ACCTGTCGGTGCGAGAATAAAATCCCTGTGTTACTGCACAAAAGATTGGATAATCAGGTA
AGAAGAATAGCTACAGATATATCATCAGGTCAAGCCCCTTTATAGAAACTGGAGCGATAA
AAATCATGCAATCTGAAGAAAAGAAGAGCAGAGAACTAATATAAAACATGTAATGTCTAT
GTAAAACAACGAAAGAGCGAGAGGAAAGGCATGCCAGTAACTTCAGTGCTTACTAGAAGC
CAGCTGTCTGGCATGGATGCAGAGCACTAAACCCTGACTGCTGGGCTGGGACACTAGGTA
CCACTGAAGCCACCCACAAGATTATACAGCAAGCTGCCCCAGGAACTGAAAGAAAGGCCA
TGAAGTCCATGATAATCCTAATTACTAGGGTAATCTGGCAGGAAAGGAATCAATGCACTT
TTCGAGGGAAGATTGTCTCAGGTTGAAGAGGTGATCATCAACATCAAGCACACTTTGGAA
CTGTGGAAACTTGCTGGCGCCAAGTTTCTTGACCACCCCTTTGGGGATTTGGTAGGGAGA
AGTTAGTCTGTATGTAGCGCCCACGGGCTTGTACCCTTGAACTTTTTCTTTCGCCGACCT
GATCGCTTGATCAAACATTGTTTTCCGCTCTCCTCTGCTAATCAATGAAATGCCAGCAGC
ATGCTGGGTCTTTCAAAAAAAAATTCTTACTAGAAGGGTTGTGCGCGCTTTGCTGCGCCG
TTTGTGTTGTCGGGATTTCATAAATTTTTATTTGGTTTGATGCGTGAGGAAGATGATAAT
GTATGTTTTCTTTATCTATAGTGCGGTGTTTTGGTGGGCACTTTCTAGAGGTATGATTCT
GTGTTATCTGCTTACAAATCCATATGTATGTGGGGAAGTTTCTTTTGCGGACGACTGCGT
GTACTATATTGGTGCTAGAGTGTTGCATGTTGACAATTCTCTTTTGCCAGGTGATGAGAG
GGTGTGCGGGACTCATCTGCTTTTATAGGCTGGTTGTTGCTTATTGGTTTGAGAAATCCT
TGACTTTGTCAAAATCATGAACCAAAATCAAAATTGGACATCTCAATCGAAATCATTGGC
CCAGTCCAAATTGTGAAGCGGATCTGAAATTGAACATCTCAATAGAATAAAATCTATGAA
CCCAATTCGAAATAACCTCTCAAAATCGCTGACCCAGTCAAAATTTGTAAACCAAATTCA
AAATTGAACACCTTAATTGAATGAGAGAGCTTCAAAATTAGGGAGTATAGTGTGTTTATA
GATAGATAGATAGATTGGTCCAGCGTCCACGTTTACTAGCATGTAAGCACGTAATTGAGA
TGTACAGATGGCATGCTCGAATATTAGACAGCTGAAAGTGGTACTCACAATAAGTCGTTT
GGACCTCAGAATAGTTGAAGTCGAGAGAGAAGTATCCAGTCTTCGGCACGCCATCGATAA
CATATTTCTTCTTTTTCGCAGGGTAGACTAGTGCGGCATTGGTGCAGTTTGCCATGTTTA
TATCCCGAAGGCAAACCCCAACACCATCCTTTGTGAGTTGCACATCGCACCACACGCTTG
TATCAGGTGCGCTGGCAAGCAATGCGAAAGCAAAGGCGGCCTGGCTGGAATCAGGAAATA
CCCCTGAAAATCCGCCTTGGGCGATAACAAGGGGAGCATCACCTGCATAATAATTAAAGA
CGGTTGTTCAAATTCTTGAATATTTTGCTCAGAATCATCCCTTGCGTACTTTTTATTTAT
TTATTATATGAACACGAATAATTAATAACCCCGCGGGGATTATCAATCAACCTTCTGAAT
ATTGACCTCTTTTCAGAACCAGGAGAGGGAGGAACTTCCTTCAGCCGTGCTTCTGCCCGC
TGACTAGCACACGCCTCTGCCCCCGGAAAAAAATACACGAGACGGAACAGGGAGGTGTTT
ACCTCGTAGGGTTTTGTAGGCGGTGGGGCGCCGGATGCCCTGCGCGTCGGCGGCGCCGAG
CAAGAGCAGGAGGCCGCACAGCAGCGCGGCGAGGAAGGCGGCGGCCTGTCCGCCACCACC
TCCTCCTCCGCGGACTCTGCTGCTGCTCCTCATGTCTGGAAGCTTCCCGCAGAGGACGCG
GACACGGGTGGTAAAAGGAGGAAGAAGAGGTGAGAGAGAGCCCGCGCTCAGAGAAGCAGA
GCACTGAAGAAATGCTCTGGTGCTCTGTCGGAGCGCATATATGGAGCACGGGTGCCACTT
GCGGTTCCGTTCAGTCTCGTTCTGTCAGTCAATGAATGACAGCGGGCTTGGGGCCGGGCC
CAGGCGACAGTGACACGCCCGTGAGCCCGCGTGCGGGACGCTTGCGACCCGGCTGGCGTC
TACTTCACCACCACTACCGGCGGCGCGATATTCCCTGGCCGTTCTGGCGTTCCGGCCTTT
TTCCGTCTTTTTTTACTGTATAATATCCTGATCTTGGTTCGGTACTAGTGCTTACAAAAT
GATTGCTGGAGAAAAAGAAGGGTTTTCTATCTAGCTTCTCAGGTATCATCGATAGTGCGC
TTTGGACATTTTTTTTTGACTCTTGAACGGTTTTCACGTCCCACGATGTTCGTGCGCGGG
CGATTCGGTCCGGTCGTATGCGCTTTTTTCAGAAACCGGCGACGCTGATGTACACACGCG
CTTAGGCCTTTAGGCCTTGTACAATGCTTTAGGTGTTTAGAAAAATAAAACGAATTTTTC
TAAAACACCAGCGCCTCCTTTTACAAAAGAGACGTCCAACTAAGTGTCTATCGTATAGAA
TCGATGCTTAAGAAAAGTTTGGTTTATTTTTTTAAACACCTCCCCTAAGCACCTTGCATT
ATACAAGGCTTTAGAGCATCTCCAACCGTTCGGCCCCATAGAGGCGCAAAATAGCGTCGT
CTGGGGGCGTGCCGGCAAAAAACTTGCCTTGGGGGAGGGGGGGGCTCGGGTTCGCAGTCC
CACCCCCACCCCAAAGGTTGTTTGAAAGGTTTTCTAAAAAAAATTAAAGTCGTTCCAAAT
TCGGTCAAAACCCAGCCAAATTCAAACGAAATTCATAGTTTTCATTAAAATTTATACAAC
CGACGAGTGGCAACGGGACGCCGTCGGCGCTCAGCCCCCAAGACCCCGGCACCCGCATGT
CCGCCGGCGTGGCGTCGGGTAGTCCGCCTCGTAGAGGAGGCGGGACTCGTCCTTGCGGAG
GTGCCGGCGGCCGAAGCCAT