morexGenes - Barley RNA-seq Database

Contig contig_137602
Source Contig contig_137602
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_137602 (7438 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_137602

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_6472	1	1219 bp	AK251007.1	Available	Available	None
MLOC_6473	5	5323 bp	AK368873	Available	Available	None
CDS Structure of MLOC_6472

CDS Structure of MLOC_6473

Contig Sequence (7438 bp)

>contig_137602 7438 assembly3_WGSMorex_rbca.fasta
GCGGGGGTGCTGGGCTCAGCTATACTGAGGCCCTTTTTTGCATCAGTTGATGCATGCTCT
CCTCATTTGTTTGATAGGATTGTTTGTAAATTAATTGAACTTATTGATGGCAAGCTTTTC
ATTCACATCCTTTTCTGCATCAAATTTTATGAATTCTGTAATGTGTATGCTATTTTCTTG
ATTTTATCCTGTTCTTGCTGTTTCAACAGCTCGCAAAATCTTCTTGGGACATATCCAAAT
TTGCAACGGTAGCATTGGTTGACATGGATTCTGAGGAGATTCAAGTGTATGTTGACTATT
TTGATATCACGTTGGTCCCAGCAACCATTTTTTTCTTCAATGCTCATCACATGAAAATGG
ATTCAGGGTATGTTTTTGATCTTCCTCTGTTATTTTCTTTGCTATGATGCTATTTAGATA
TGTCCGTCTTACTTTTTCTATACCTATATAAATTCATGTTGATACCGTCCAAGCCTTTTT
CTTCAGAGTTTGAAATGACCTGTGTGTATCTGAATGACACCGACCTAAAGTTACCACTGT
CTCTGATGTATTTCAAATAATGCCTAGTTAGCTGATATTACTATTTCCAAAAAAATTGCC
ACCCTGTGTTCATGTTGGTTTCACATAGATATGTATCATGATGTAAAAAATCTAAGAGAC
ATCCATTTTCCTCTGATACTCCTGACAACTGAGTTTATATTAATGACTACACATTCCAAG
ATCTACAAAAGATTTGACATGACTCATTTGGAATTTCAAATAGATTGCATGAAAGATTTA
TGGAGAAACTTTCAAACATATGAGAAAATGTATCTGTGGCTGCGGTCTGAACTTAATCGA
ACTTCAAAGAGTTGGTTAGGTTGATACTGAATTGTACGCACCAACAGGGATATCATATTA
GTTTTATTTCGTGGCATACTATACTTGCAAAATGAATGATGAACTTGTTATATTGTATAT
TTACAGGACACCTGATCACACAAAATGGATAGGCTCTTTCAGCAGCAAGCAAGACTTCAT
TGATGTAGTTGAGGTGAGTGGGTGCAAAGTCCTGTACTTTCTCGAATTCTTTCAGTAATC
AGGTTCGACTATTGACAATGGCAAGTTAATGATGTGAACATCATAATCCTTGTACTTTCT
TGGTAAATGCAGATCCTCATGATACATTTGTAATATTAATTTTTTGTATGGAATCCATGA
ATGTTAATCTGTGCAAACTAAAAAGGAGGACTGACTATAGTTAGCTACAGATTATACACA
GGTATAGATTATAGATATCTGTCCATACATTTGTGAATTGCTGTTCAGAATCCACATGAT
CAAGAATATATGTAAAGAGAACAGAGAAATGTATATTATGATAGGGCTGATATATCCTAT
ACAATTTGGTGTAATCTCATGCAAACAGTTAATTGGAGTACATGTTTGAATAACAAAGGA
AATCTGAATGAAAATGGTTATTTTTCCTGTGGATACTGGTCCTCTACTGTAATATGTTTT
CAAAATTGGAGAAGACCATGTAAAAACCCAAAGGCATGCTGTAAAACTTCTCAAAAGATA
TATTTTTTAATGACGGCACTATCCTGTTTCCTTTTTGATGGAACAAAATGGCATGGTACG
AATCAACCTTCTCAACTGGGTCCAACTACCAACATGGAGACTTGTTAGATGTCTAGTCAG
ACAAGATATTTTTTTAACCGGGTTCAGCCATGACTCCCAGTTGAGCGTGGCGTAACCCCA
TTGAGGGCTGTAGCTTCAGGTACAACGTGTCAATCCAGAGATGTGTCGGCGGCCAGTCCG
TCGGCATGAAATGAATTCCTTACCGACCCCTTCCATCCAAGACCAATGCTCAGAGGAAAA
TTTACTTGAACCTCTAGTTGTCCGAATGGATCACCTGAAGAAGCTTTAGGCCACACCTTT
AAGGAGAGCTCTTGTTCTATATGAGAGATGGCTTACAAACGATCCATGAGGTGCCTTTTA
TAGGCCATTGGCCTTGTACAAATGATCACCAAACCCTTGGTGGGAAGGGAAACACAGAGG
CTTTGTAATCTAGTCCCTCCGTTCTTGAAAAGAAAGGACTGCAAATTTTGGTACAGTTGT
AATATTAAATTTGTATATGGAATCCATTAATGTTAATCGGTGCAAACTAAAAAAGGAGAA
CTGATTATAGTATGGTGGTCCATTGGGCTTTTTAATTCTTATTTCTTAAGACTGCCTTTA
TCTGAGGTTTTTGGTATGCAATTGTCTCCGCCCAAAAAAAAAACTTAACCGATTCAAGGC
ATCAGAACTCATCTGTGATGATTGGCATTGTGTGTCACAGGTTCTTCTGTACACCATTGC
TACACAAGTAGTTTCCGTTTCAGCTCATTGTGATCTATTGATGGCAGGCAGTATTCAGGG
GCGCGATGAAAGGCAAACTGATAGTGTCTTGCCCACTTCCACCAGAGAGGATACCCAGAT
TCCAACTCCTTTTCAAGGATGTCTAATGACAAGAAGCACACATTCTCAACATATGTATTG
GTCTTTTAGATAATGGAAGAGTTTCATTCCCCCATCCTCTGCACACATATCCATGCTGCC
AGACCTAAAGAATAAGATGTTCATGGTAAGGAAAAAAGGGACTTGAGCCAGCTTTGTGCT
AGCTGGTGCATTCCTTGCTCCTTTTTTTCTTCTGCGACTTGAATGATCACAAGGGGTGCA
CTGCAGGAGGATATGGAGATGTGCTTGGATGAGCTTGGTGATGAACAGTCAAGAGTTAGC
ATTTGCACTGGTTTGCATCAACTCTGTTTCTCTATGTTATAGCATAATACAGCAATTGGT
GTTTTGCCCTCTCTAGTCTGTAGATTTCTGTATTTCAAAAACTAGAATGGTCAATTAGGT
GCTTATCTGTTACTTTAGTTTGGTGCAAGCCTGGTTATATGTAGTAAGACTAGTTGGTGT
TTTGAAGTGATGCAATCAGTTATCAAAATTTACATGTGCATGGCATTCTCCATCTCGGTG
GTATCGAGAAAAAGACATGTCTTTTTGTTGGGCTACTAGGTTGGTCTTATCTTTATTTGA
AGAAGCGGCGAACACATCCCTTACAACAGCCTACAAATCTCATTTCCGATGGGTACTCTA
CTCGCACCAATGCAAATATAAACTATACTACAATGGGGGAATTACATTGTATGTATCCAC
CTCTATTCCGTAGCTGCAATCTACTAAAGGTCGATCAAACCTCGAATGTTATCTCCATCT
CATGCATGTCAACCATGAGGAAATGAGACCCTCTGTCTACCACCTTGTTGCCATCCTTCC
TTACTCTGCTAAAATGCTCACATGGGCTGATGTCAAATGTGAGGCTGGCCTTCTCTCCAG
CCTTGAGGTGCTGTCTCCTGAACCCGATCAGCTGCTTCGCTGGCCGGCCGGCGGTTGCGT
TGGCCCACCGGAGGTACATGAGCACCGAGTGCTTGCCGTCCATGGGTCCGTGGTTTTCCA
CCTCGACCACGGCCGGGAACTTGAGCTGCTCGCACCCTCGGGCGCCAATATGTTCGACAT
GGTAGCTCGCGACGCCGCCTTCTTCCGCCGGTGTTGGCATTGTGCTCAGGCCTGCGAGCA
AGTCCGTGTTGGGCGTGCCGGATGAGAGCAGCCGGCGAGAGTAGCTGGAGTAGCTGAGGC
CGTAACCAAACTTGTAGACAGTCTCTCCCTGGTAGAAGCGGTAGCTCCGGCCGGGGTAAC
CGGTGGCCGGGTCGGCGCGCATCCGCATGTCGGTCATGGGCACCTTGGTGAACTCTTCCG
GGTACCAGGTCACGGGCAGCCTCCCGCCTGGGTTGTGGTCGCCGAAGAGCACCCTGGCGA
TGGCGAGCCCGCCGGCCTGGCCGGGGTATCCGGCCCAGAGGATGGCGCCGATCTTGGGGT
TGTTCTTGGCGAAGGTCACGTCCACCGGCCCGCCCGTGAGGAGCACCAGGATGACGGGCC
TCTTGGCGGCGTCGGCGACGGCGGTGATGAGGCTCTGCTGCTGCCCGGGGAGCAGCAGGC
TGGTCCTGTCGCGCCCTTCGCTCTCCTGCTGCTGGCTGAGCCCCATGAAGAGGAGCACGT
AGTCGGACGAGCCCGCGAGCGTGGCCGCCTGGTCCGTGTCGGCCACGTCGCAGGCCGCCG
AGCCGCACCCGGCCATGAACCTGACGTCCTTGACGTAGCCCTGGACCCCCTTGAGCGGCG
TGACGGACTCGCACGGCGGGCCGAAGTAGTTGCCGATGAGCAGGCCGGGGTTGTTGGCGT
TGGGACCGATGACGGCGGCGGAGGCGATGGCGGCCCGGTCGAGCGGGAGGATGCCGGCGT
CGTTCTTGAGGAGGACGATGCCGTCCTGCGCGGCTTCGAGGGCGAGGCTCCTGTGCTCCG
GGGTGCAGATGTGGGCGGCGTTGAGGCCGCCGTATATGTTGGCCCTGGGGTCGCCGTCGA
AGTGGCCGAGGCGCATCCGGATGGCGAAGAGGTTCTTGAGCGCCTTGTCGACGTCGTCCT
CCGTGATCTTCCCCTGCTGGAGGGCGGCCGGCGCGTGCTGCTGCATGTACGTCCCGCAGT
CGATGTCCAGCCCTGAGTTTTTAGCAAGTGCAAGTGACAGGCCAGGGAAGTGATGAGTTT
TAATCCATGAAATGTGTAGTTTAATGATGATGGTTACTGTACGTACCGGCCTTGAGCGCG
AGTGCAACCGCGTCCTCCGGCGTGGGCGCGTACCGCTGCGCGTCACGCATGATGGCGACG
GCGTCGCAGTCGGAGGCGACGTACCTGCACGCACGCAAGCAACCAAAAAAGACCATGGCA
TGGCATCAGTAATTCAGTACCACTACCGCGTGAAGACGACGACCGCACGCATGCATGTGA
ACAAAATGAAGCAAAAAAATCTGAGTGGGTACCCACCCGTCGAGGCCCCAGTCGGCCCTG
ACGGTGTTGGTGAGGAGGCCGGAGTTGGCGCATGCGGGGACGCCATTGATGGCGGTGTAG
GCGCACATGACGCAGCTGGCCTTGCCGTCCACCACGCAGCTCCGGAAGGGCGGGTTGTAC
GTGTCCTCCAGGTCCTGCGCCGTCACCCTCGCGTCGAAGTTGTACCGGGCCACGCCGCCC
CAGTCCTCCAGGTCGTACGCCGTCGCGTGCTTGCAGCACGCCGACGTCTGCAGCAGCGAC
GACGACGTCGAGTTCCCCTGCAGGCCCTTGACGAACGCCACGCCGTAGCGGCTCGCCGTC
GTCGGGTCCTCCCCCGGGGTCTCCTGCCCGCGGCCCCACCGCGGGTCACGGTAGATGTTC
ACGTTCGGGGACCACATCGTCAGCCCCTCCGCCTGCCCCACGTTGTACAGCGCCCGAGCC
TCCCTGCCGATCGCCTGCATCCACGTACGTACGTGTCATTTTCTTGACGATCCGTTCCAC
TTCCACCGGAGATGGCTTTCCCATGGCACGCAATGGGCAGTGAACAATCAAGGCAAAATG
AAAAGGAGATATGTGCTACTAGTAGACAATAGCTAGGACATGCTTGCAACGCAAACTTGC
ATGTTGGTCGACCACCAAGTTCGTCACACCTTTTGCAAAAGTATGCTACCACCTCCGTTC
TAAATTAATTATAAGACGTTTTGGATATTTCGATATGACCTACGAAAATGAACGACCAAG
CTGCTCACACTAAAACACGTCTATATACATTCGATCTATTTAGAAAAATGTTAGTACAAC
ATTGTATAATTCGGAACGGAGGGACTACTACTTGAGCATTTGCATCATTGCATGAACTGC
AAGTATGTATGACTGGACGTGACCCGGGGTCATCCTCCTTTTCTAAAAAAAGAAAAATGT
ATGACTAGACGAGTGGTGCTTGACTAAACGAGACCCAACAATTATTTGTTTCTGCAGACT
TGATACGGCCTAACAATTTGTGCTTGTGATCAGGGAGGCCTAACATACAGTTGGCGGAAC
TCCAACATGAAGTTAACGACATACTCGATCCGGCAGTAATCCATCTCAAAATTAGGCACG
CCAGAATCAAACCACATGCATATGGATCCAGCTAGCTCCTGCTAACAAGAAGCACGGGGC
GTGTACCGTAAGGCATGACCTTGTGGCATTGTGGGCACGCTCCGTAGTCCATACGTACCC
ACGGACAGCAGTGCAACAAAAAGGTTGGGTACGATGGAAAAGGCCCGATCTACTATTCAT
ATCAGATCTGTGTGTGCCTCACGCTCACCTCACATGTACCCACAACCAAAAGGCGCCACT
TTTCTTTCCCGCACAAACATTCTGCTTCTCCTTGTCTTTGGCACTAACCGCACTACGTGT
GCTCACGTGTTGTCCCTTTATAGCTCTTTTCTAGGTGCCTCCGGGTGTTGATGTACACAC
GGCAGTTTGTCCTATGATTTCTAGGGGAAAACACTAAAGGACTTTGATGATTTGGACGTA
CTTTCATTAGTTTGGCCTCGTTGGGATGAGAAAATCGCATGTGACTTTTTTGTTAAATAT
GTAGGTTTTGATGCCTTTGTACTGAAGTATGCATATTAGCTCTCTTTTTTGTATGTGCGT
GGGGTGCAAATGAGAGAAATATAGTTTGTCTATATAAACTACTTACTTGATTCATAATTA
ATATATGCTTTGCACATAAGCAAGTATATGTGATATGATCCATGTGTATTTCTAAAAGAA
TACCACGCTTTTTTCCTTAAAAAGTTTACCAATTGGGATTATTTGTTGTACTAGAATGCA
CCCTTGTGTTGAAACCAAAATCATGTTACCGGCCGGCAAGAGGAGCTACCTACCAAATCC
TTAGCCCACGAGCATCCCCATACTGTACAAACAACCGCGCTCTTTGTCTCTTTCCCAAAT
CACGGATCAAGAAAAGGATCCCTCCCCTCCCCTCCGGTGAAAGGAAAGAAAATGGCCGGT
GCATGATGCATGTCATGTCATGTCATCGCATGGACTATGGACTGGAGGCACGCGCATGCA
TGCATGCGTGCATGATGCCTGGGCCCGATCGACCCTAACCCCACCCCCGAACAACTAACT
ACCCGCCGGAGACAGCGATCCAACGCAACATTCCATAATGAAACTGCCGCACGCCATTAC
ATTATGCGAGCAAAAAGCGAAACGAAACCGCCAGCAGCCGGCCACACGGGGCTTATACGT
ACGTACGTACCTGGCCGATGCGGAGCCAGAGGTCGTCGTCGAAGGCGGCGGCGGTGAGGC
TGACCTGCGGGAAGCTGGTGGCGCTGCGGACGGCGCCGTTGAAGTGGAGGCCCTTGCCGG
AGGTGGCCAGCCCGTGCAGCGCCTCGTTCCACCACTTGTAGGCCGGCACGCCCAGCCGCG
GCACGCCCGCGGCCTCGTCGCCCAGCTGCGCCACCTTCTCCGCCGTCGGCGCCGGCGCCC
CGACGGCCGGCGCGCCTCCGGGCCCGCCGCGGGGCGGGATCCGCGGGCGGCCGCGCGC