Contig Data
morexGenes
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Map Locations of contig_137580 (3272 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_137580

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6455 1 183 bp MLOC_6455.1 Available Available LOC_Os01g67580.1, FRAME:+3, EVALUE:1e-24, 13101.m07347 protein multidrug resistance-associated protein, putative, expressed
MLOC_6456 1 249 bp AK362832 Not available Available None





CDS Structure of MLOC_6455






CDS Structure of MLOC_6456






Contig Sequence (3272 bp)

>contig_137580 3272 assembly3_WGSMorex_rbca.fasta
GAGTAACATATAGATATTTAGCTAGTCTTAACTATTAGGTAGGTGTGTATAGAAAGCTCT
CGACTACAATATTTTAGTACATCATAGTACAAAAGGTTCAGCGATGTGGAGCTTACAAAG
TATTCCACCTTAGTTTATCCTACATTGCTACGACCTACATATATTTACTTGCAAGAGTCC
TGAAAGAATTGTTGTTACATCACACAAATATGTCTATCAAAGAAAAACGGAAAGCAAGCT
GCATTCTGTGCCAAAACCAGGGAATATCACCTGTCGTAGGAGTATTTTCAGCAAGAACCG
TGATTTGCTACTATTTTCAGGAAAGAAATAAGATAGATGCAGCATTAACAAGATGGTGTT
TGTCATGGCAATCTATTAATACAGTAACTGGCTTGCAATACCAGGGCTCAACACTTTTTC
TTCTTATATGGGACCATTCTTGATCACCTACTTGGTGGAGCTACTCTCCGACAAGAACAC
TGAAAAGGGCCATGGCCATGGCTACATGCTTGCATGCCTATTCTTTGCCTCCAAGACAGT
TGAGTCACTCTCACACCGGCAGTGGTACTTTGGCGCCCGCAGAATTACACATGGGCAATC
TGCAATACATAAGCAACACATGAGCTTCAAGGGCAATCACTACAATTTACACGCCTACAA
CATAAGACGTGAAACATAACCAAACAAGTAAACACACCATTTATGGTACTAATTTGTATA
GCCATTAAGTGCGTTGCCACGGATCAAAAAACGCATTATGATCAAACAATTGTTCTAACT
AAAAAATGTGTGTCGAATATGATAATGCATGGTTTCAATTCATGAACAAATTAATTCTCT
CCTACGTCTTTCTTCCCACGCAATTGTCGTATCCTTTTACCCACTCCTCCCTTGTATGAT
TTCTTTTCCTTACCTTTCCTTTCCCTTCACCTTTTTTCACACTAACGTGTGGGTAAATCC
TCTTCAAAATCATTTTGTAATCGATTCAAAATATTATTTGATCTCATTTTTGGAGATCAA
TAGTTGAATGGAAACTTAAGAAGTTCCTCTCACAAGTAACTGAAAATAAATATGAACTCC
TATAAATATAAAAACAAAGGACAAACCCTTATTTTTTGTGAAAAAATAGACCCTCTCAAA
CGGCATATAGTACTGCCAAACCCAAAGGAAAAAAAGACCTACAAAAGAGGAATGTTTAAT
GCAAAACATACGACCTTTAGGTCACTCTCATAAAAGTTATTCCTGTACGTATCGGTCAAA
GAACTGGGAGGAGCATCTTGAGTTCAAGCAATTCTCTCTGAAAGGGGCAGCTTGAGTTCA
AGGTTGTCCTCTTCCATCTCAAGAGGAACTGTTGACATCCTTGAACATAGGAAGAAGTTA
ACAAACCAAGCTCTATGTGACCCCGTCTTGACCATGGACAAATACAAACCTTTTGCAAAA
AAATGAAAATTCAAAGCCAGGATGAGTGTGATAGTTACTTTAAGCTCTTACAGCCCAAAA
AGCATATGATTTGATAACCTCCAAGTTTCAACATTACCTTGAGCCTTAGGCATGCTTCCT
GTTTTTGTAGAGTTGCAGATTAAAGCTCCAAGCATGACTGAAAATTGAGAGAGATGTGAT
GAGTTAGGACCGACAGGAACCATTATGTAGGATACTGACATAGGGGGTAGCCAGGACAAG
CACAATAACCGTAGATACTCCTATTTTCAGGAAAGAAAAATCTGACATCAGAAAATTGTA
TGCTCATGTGTTAAAGATGAAGGAAAGAAAAGAACACCTAAGAAGCAAACTGAAAGTGAA
GGCAGACCAAACATATTCGTACATAAATGTATAAAAGAGAGACACCTTCACACCTTAGAT
TTGAGTTCTCTTTCTGTTATTGTGCTTTCCAAATCTTGTTAATGCACAACATAGTTCTCT
CAAAGAATCGTCCAATTACCCGTGGGTAAGAAATTTTGTGTCATGTTTTCGGGAAGCGTT
GCAGCCCATTCTGCGCTTAATGTTTTCTTTTATTTTGTCCCACTTTCATTCTTCCGCTAA
CTTTGTTTCTCATCAAAGCCTACATTTGAAAGTCCACATATCAAAGAGCAAACAATCCAC
TATCATCAGAAATAAAGCAAAGGTTAAATATCATAAACTCTGAACGCTGCCACACAGAAA
TGTTCAGAAAACATGGAGCTGCGAGTTTCAGATTTAATGTTTGGAAATGTTTTTTATTCT
ATAGCATACTTGCATCATGAAAATCTCATGTTTTAGAACTCAGAAACTTGCCATTTTAAT
GTAACATATAACACTCATGAGGAAATGAAAGAGCATATTTGGGCTCTATGAATCAACATT
CTTAAATAGAAAACAAATATAAGTTTCAATGAGAAATGAATACGTCTCTACATTAGTTTT
GTAGAGAGATGAAAAAGGAAACATACAGGTATGTGGCATATTAGTTTCTTTGGGTGGTGA
CTGAATGTCTGAAACATGTTCTCTTATATTCCATCTTGCAATTCAATCTAAAATACTGAC
TCTAATGCAGCAACTAAAATTCTGGTCGATGGAACTTGTGATTAGGAAGTAAATGCTTTC
TCTCTGTATGTTTCCCTTAAAACTAAGCAAGATACAAAAATAAGGAAATAAATGCTTGTG
ATTACGAAAATGATGCACCAGGGAGAGTATCTAGACAAAAAAGATCAAATGATACAAAAA
AACTGGAGGAGCACAATATGAATGCCGAGATCGGCTGCATTGTTACCAGCTGCTAAGCAT
AGCACAACAACAAACTGTGCAATAGAGGATAGTGCCTGCTTGGAAACACCGCCTGACTGT
GATGGCTTGGCAGTTGAAATAAGGGAGTATGACAATGTTTCAAAGCTTGTATTTGCATAC
TGGACCAGTGAAGCAAAAAACTTCTGTAGCGCCTGAAATAGAAACAATGTCCTTTGTCAG
TAGGAGAATAAGAAGAAATCAAGTATTTACATTTAGATATGAACATATATACCTGTAGTG
CTTGTCCTTGCAACAAAGAACTCCTGATCAAAATAAGAGCCTGAGGCAAAACTTTATGTC
TCACACCTAAACCAACATTTTAATGGATCTTCTGTCAACCATTATTGTGCAACACAACTC
CAATGCAAGAGCACCCATATGCAAATCATCATGTACGTGTTTTGGTGACCTATACATGGA
GAGGGGGTAAGGAGGGGGAGGCTCGCCTGTAGCCGTCGTCGTCTGAACGGGACCTCCGCC
TCTCCCGGCGGCGGCGCTTGTGGCGGGGCTTG