Contig Data
morexGenes
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Map Locations of contig_137574 (5198 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_137574

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6452 2 1605 bp MLOC_6452.2 Available Available LOC_Os08g06200.1, FRAME:-2, EVALUE:7e-37, 13108.m00621 protein stomatin-like protein 2, putative, expressed
MLOC_6453 1 183 bp MLOC_6453.1 Available Available None





CDS Structure of MLOC_6452






CDS Structure of MLOC_6453






Contig Sequence (5198 bp)

>contig_137574 5198 assembly3_WGSMorex_rbca.fasta
ACCCGAAGCCGCACCATCAAGTACTTGAAGGTCCAGTGGAGCAACCACACCGAAGCAAAA
GCAACATGGAAGCGTGAAGACTACCATAGATCTGAGTTTCCTTATCTCTTTAGTGCTTAG
CCTAGGAATCTCGGGGNNNNNNNNNNNGTAAGGGGGTAGGTCTGTCACACCCTGTGTTTG
TATCACTTTGCCGCATTATGTTTTTACAAAATTTGAAACCAACTAGAACTTTTTGAGAGC
TTGTGATGGATGTATTGATTGCAACATGCTTGTGTTTTTAAGTCACCAAAATTATTCTTC
TCACTAAAACTCCTCTCGTCGGCCCCAACGCTTGCGACCATGCAATGTGTATAGGATCAT
AAACTATTTTTATAAAAAATTAAAATTATTTCAACAAAAATGGCATTTATATATTTTAAG
GTTTCAAAACCCTTGAGTTGGGATTTGTATTACAAGTTCTTAAATTAGGAGGGATGTTTT
ACCCTACAACTACAAGTCCAACTGTAACCTACTTGTACACAATATTCGATACAACTCCAA
CACCGACTCTGAACAAAAATCCAGAGACTTACTGCAAAGAACAAAACTCCAAAACTCCAG
AGTAAACCCATTGGAGAAGTAAATAGAGTAGGACAACATGCAAACTGTCAACATGTAAAA
CTGACATCGGAACACATGAAAAAAAAAAAACTGCAGTGAAATATTGCCATCAAGCGTATG
CTGGCATCGTGAGGGATATACTTGCATTTGCACAAGTCTTGAAGGCTGCCATCAAAAACT
CTCCAGACACCTAGCCTCCTTGCATTTGGCGCCTGGATAACCAATGTCAGGTCAATTACC
ATATCAACCTAAGCCGACTCAACATCACATGAATTAAGCTCGAAACCTCAAATGCTGCTG
GTGTTTTCAGTGACACCCTACTATCTAAAAAGGGTTCCCTTAGGTACTTGAACACGGCTG
ATCATTCTTTACGCCTCTGCAGGGAGAACGTGCTGCCATGGCCTGTTTGCGTGCTGGGTG
GGGTCACGCTGGTCACAGAAGGTAGGCCAAACATATCGGCCTCTTCTTGCGGTCCTGCTT
CCTCAGCTTCTTCTGCCTGTTGGTTCCCTCCTTTGGACTGGCTTATGTGCTTGTATATCT
GGAGAGACTGGGCTATCATAGATGATGGGTTGCCAGCGTCACTTGGAAGAAGCATTGTTG
TGGTCTACATTTCATAATGAAGCATCAGTACTTTGCCAAACACCATAAGGATTCATGAAT
CAGGAAAATGAAACTTCAAATATCTCACATTCTTGGCCAGAGCAGCAAATGCTGTGATGT
ATTGTTCAGCAATTCTCAGTTTTGCAGCCTGACAGGAGAGAATGAACAGCACAACATGAG
CAGTGGAACCTTACTGTTTTGATAGATAACTTCTACATAAACAACTGTAAGGTCAATTAA
ACGCGATATTAAAATGGGAGTTGCCAAATCATGATACCTCAGCACTGCCTTCAGCTCTCA
TAGACTCTGAGACCATTCTAATCCCTTCGGCGGTAGCTTGTGACTTGGAAAGAATCGCTT
CAGCCTCACCTGATGTTTATCAACAAAAATAAATGAGCCCAATTGGCACAGAAATTCCCC
TTCAGAAAAAAAAAATACAGTACAAAACAAAATGTTTCAACCTAACCAAACCAATCCACA
CTAGCAGCCCAATCTTCAACATGAGCAAGATGATGAAAAGATAAATAGAAAAAAGAGGAT
GCATGATGTGAGCACAACTATGACAAAACTTATCAGGTGCATGCGGACCATATCTGAAGA
GGTTAGCACAACAAATGGGGAGATGAGCAAATTCGAAAGCAAGGGGGGTGCTGGCAGAAC
AAATAGCGCAAACCGATGCATGCTACACAAATCAACAGACCACATTGTCATTACAACATA
GAAATGATAAGGTTAGAATTGAACATACCCTTTGCGCGGTTTGCCTGATCCAACATAGCC
CCTGTTAAGAATAAATGGAAAGTGTCAAACATAAAGACCCAGCTTTTAATAAAATTTGAT
ATAGGTCATACTCTATATGCTCATGTTATCTGAGCCGCTAGTCCTCCGTGGGATCAGAGC
AGTCGGTTGTATAAAGTAACATATTCAGGATTCTAACACTATTATTGTATGAGCACTGCT
ATGCACACGACGCTGCGAGGACGATTTGTGCACGACAGCACATATCAGTGCGTCCATGCA
TACCATCAAAGTGCAGTACATGGCTGGATTGCCTCTCGTGCCGATGTCGTGCAGGCATGC
ATCGTCCGCACAGCAGTTTTGTTATTGCATAGCGCTCGCATGACCAGTCCCTACTTCATA
AATATTGGGGCCCTCGTTGGTCCTATACGGTCATGGTATCAGCAGACTTTCCTGGACCGG
GTGCGAGGCCGTATGGTCCACTTAAAAGTCGTACCAAGGAAGCCAACGGCCCAATTTATT
GGCTGCTGGTGGTTGTCCACATCAGATTGTTTATTCTACTCTCAGAATCAGCTTGCGCCC
GAAACAAGAATTCAGGATCCTTATTAGGCCGCTCGAATTTTGGGTCATACTTTGACTATC
TGTTTGACTAAAATATGTGATGTATATTATAAAAACTATACTATTGGATATTTGTTCGAA
AGAGCTTTCCTACGGTATAATTATTGTGACATATAGTTCATATTTTATTAGTTTTATGAT
CAAAATTTGCTCCAGAATATAAGGGGGCCAATAAACCCCAACATAGGAAGTAGCTCATCG
GAAACCTCAAATGATATTCTTGACATCATCATCAGCTTCAACCCTACTTATTTGCCCACA
GAGATTACATAGAGACCGTTTCGTAAATGGCACTTTCTCCATTGCCCCGAAGAACTCTCC
AATAATGTTGTACACCTTACTAATGTTGACGTTATTCTTCCTCAGATTCCTAATTAGGTC
CCTTATGTAACATCAATATGCTTGTGAGATGGCTAATGCACCATCTCCCTGCATATTGGT
GTTAGGATGTGATTGTGCTACACTAGGTGCTCCGTTATGTGCCATCCATTGTCCACTGTG
TAGCAGCCTAATCATCGCTGGGCATTCACATTGGCAGGATCTTGTGTTCTCACGCAATGG
TTTCCCCTGTTTCTTTCAACAAACTCCTGATTAGTTACACCCCTATTTTCAGAAATGGGC
ACAAATATGCATAAATAGGGACTTACTAGGCACCGGTAACCAAGATCCTGACTGTATCCC
CAAAGAGGCGTGGAGAGGCCTCGGAGACATGGCGATAGTATCGCTAACTAAACTTTTCAA
CCTCTTTTTTCAGGCAAACAAGATGCCAGAAGAATGGAGGCGGAGTATATTAGTACCAAT
CTTGAAGAACAAGGGGGATGTTCAAAGTTGTAGTAACCATGGAAATAAGCTGATGAGCCA
TAAAATGAAAGTATGGGAGAGTCATTGAGCACCACTTAGGAGGAGGAATGACAAGCGTGA
CCAAAAATCTGTTAGATTTCATGGCCGAGAGGTCGACCATGGAAGCCATTTTCTTGGTAC
GACAACTTATAGAGAGATACAGGAAGCAAAAGGACCTGCATATGGTTTCATCGACTTCGA
GAAGGCATACAATAAGATACCGCAAATGTCATGTGGTGGACCTTGGAGAAACAAAGTCCC
AACAAAGTACATTACACTCATCAAGGACATGTACGATAATGTTGTGAGAAGTGTTTGAAC
AAGTGATGGCTACACTGATGACTTTCCGATTAAAATATGTGCACCAAGGGTCAGCTTTGA
GCCCTTATCATTTTTGCATTGGTGATGGGTGAGGTCATAAGGGGTATACAAGGAGATATC
CCATGGTGTATGCTCTTTGCGGATGATGTGGTGATAGTCGATGATAGTCGAACTGGGGTT
AATAGGAAGTTAGAGCTTTGGAGACGAACTTTGGAATCAAAAGGTTTTAGGCTCAGTAGA
ACTAAACTAAGTACGTGAGGTGCGGTTTCAATACTACTAGAGTACTAGGCATGAGGAGGA
GGTTAGCCTTGATGGGCAGGTGGTAACTCAGAAGGACACCTTTCGGTATTTGGGGTCAAT
GTTGCAGAAGGATGGTAATATCGATGAAGATGCGAGCCATCGAATCAAAGCCAAATGCAT
GAAGTGGCGCCAAGCTTCTGGCGTTCTCTATGACAAGAGAATGCCGCAAAAGCTAAAGCG
CAGATTCTATAGGACGACGATTCGACCCGTAATGTTGTATGGCGTTGAATGTTGCCTGAC
TAAAAGACAACATGTTCAACAATGGAGTGTAGCGGAAATGCGCATGTTGAGATGGATGTG
TGGCCACACAAGAAATGATCGGGTCCAGAATGATGATATATGTGATAGGCACCGACTGAA
TAGAAGCTTGTCCAACATCGCCTGAGATGGTTTGGGCATAGACAACACAGACCTCCAGTG
CATAGCGAACAGCTAAAGCATGCTGATAATGTCAAGAGAGGTCAGGGTAGACCAAACTCT
GACATGGGAAGAGTCTGAAGGAGAGATCTAAAGGACTGGAATATCACCAAAGAACTAGCC
ATGGACAGAGGTGCGTGTACAGCTATCCACCTGCCATAACCATGAGTTGGTTTCAAGATT
TAATGGGTTTCAGCTCTAGCCTACCCCAACTTGTTTGGGACTAAAGGCTCTGTTATCATT
GTTGTTGTTGTTATTTAGCTCACTCTTCTCACACCCAGATACTAGACCAATATTCCCAGA
AATATAGGTTACAGAAGTCACACGCCTCTGTGCTCTGGTTTACTTACTTCGTCTCCATGG
TTGTCTGCAAAGCCTCTGATGCTTTTTTTCTAGAGCCCTCATCCTGCTAGGTTATGGTGC
TCTTTCAGGCCTTGTTCGGTTAATCCCACCGAGGAAGGGATTGGAGAGGAATGGAGGGGA
TTGAGGTGGAATTTGACTTGTAGGGGATTTAATCCCTCCCAATCCCTTCCAAACCCCTCC
AATTTTAAAGAAACCGAACAAGGCCTCAAGTGGATTACTACCAACTCTATGTCTCTAACC
CTGTGGTAAACAAATGGAAGCTTATTTAGCGACCAACCACATCCCAACAATAGATACCAA
CGACATGTTAATATGCTTATTCCTATAAAAATCCAAGTACGACATGTATACACGCCACGG
TGCATCATTGACCACTTAATACATACTCCCTCCGTCCC