Contig Data
morexGenes
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Map Locations of contig_137560 (6538 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137560

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6442 4 2501 bp MLOC_6442.2 Available Available LOC_Os06g37430.2, FRAME:-1, EVALUE:0.0, 13106.m03873 protein expressed protein
MLOC_6441 8 4395 bp AK373034 Available Available None





CDS Structure of MLOC_6442






CDS Structure of MLOC_6441






Contig Sequence (6538 bp)

>contig_137560 6538 assembly3_WGSMorex_rbca.fasta
GCTTTCTTACAATCTATTACTAGATTTGTTGGTTAAAGATTCTTTGGAAAACTGAATCGC
AGTACAAAACCATAAAAAAAAACTAAACGATAAGCTGAACAAACACCGTCAATAAGCACT
CATTTAATAAGGCACCATCATTTGTCAATAACAGCCTGTTGAGAGCGAATTTTTTGGAGT
AACCTCATCAGCCACAACCAAGAAACTGTTACAGCATCAGCAGTGAAGGGTGACAAAGCT
ACCAAAAAACATCACCAAAACAACTGGCGATTTCCTACATGATCACCCTGCTACTCCTAC
CTAATATCGTGTATGAATGGTCCACCTTCCACGGGGAGTCTTGGCACCAATCTCATATTG
CCGAGCTACCCTCCGCACAGTCTGGATCATCCCGTTTTCTTTGTGTGTAACCTGAGTTCC
TGATGACTCTATTTGCCTTATGTGGTGCTTGAATTCTTTTAGTCGCTCAGAACTGCAGAG
TTGGAGCTTGTGCCATACAGATACATATCTGGTGCTCAACGACGAATCGACGATCAACTG
TAAAAAGAAGACAAGCTTGTTTTAGAGCAAAGCACGCTTCGTAGAAAGCCATACATAAAG
CATTACACATGCAGGGGCTGAGCAAAAGCAGAAATCCGCCCCAAAAATCTAGGGCTTCGT
GAATATGAACTAAATCCTTTTGTTTTTCTTCCATAAAATAAAATGTCAACAAAGACTACC
AAGGCCTTGTCCGGTTAAACCTTTCAACAAGCTCCTTCAAAACTCTTGCAACTGAACAAG
CCCTAATTGTGCTGAATGAACTAAGATGAAGGAAAATAAAGCACAAAATGCTGGACCAGC
CTGTGATGTCTATAGGGAGAGAAAGAGTACCAGATGTAACTTCATTGTGGAACAGAAGGT
TCAGAAGTCATATTTTGTTCTGCCACTCTTCAAGATTAGGCACAACATATCAGATAATTG
AGAGGTTGAATTGTAGAAATCCCATGCCTCTAGCATCAAACGCTTTCTTGAACCTTTGAA
ATGGACAACCTAAGAACATCATATCAGATTTGGCATGTTACCATACTCAATAAAAAAATA
CTGGATATATCAACAGGCCCCCAAAATCAGCAAGTGTACCGCTGGACAAGTGGCAACAAT
GAAAAGCAGTGTACTAATAATAGTATTAACTGTGCAACTAGTGGTTAAAAAAAACTATAT
TTTATCGCGAGGAGGGCATGGATCAAATAAGTTCTTAAGAGTAGGATAAAATGATGTACC
TTAAGATCCAAGGGCATACCGTGAAACTGTCCAGCACCCTCAGGTGGAGTCCAATTATAA
ACTTCACAAGGCAAAAACAGAACAGATGCTCCATTGATTTCACCAGCAAATGTTCCATGC
CTAGAAAAATTCCCAAAGGCTGATGGTAGGTAAGACTTCACAACCCATGCCAGTGCTAAC
TGATCACCAAGCATGCGGGATGCCTTCATATACTTTAGATTGTATGCTTTAAGAACTTCG
TTGAAGAATTCAATAGCCCTAAAAGCAAATGAAGGAATTATTTAATGCAATGCCAAGTTT
TCATACCAAGATCTGCTTCATAGATGTTCACTTACTTAGAGATGCCATCTCTGGTCCCTC
TGACAGCTACAAATCCAGAGTTCAAGGGCTGGCCTTTGTTATTACGAAACGTAAGAGCAA
GGTGCCAATGAGGATAGCTCGTGAAGATATGTCCAAGATCCTCAACCACTGCCATATCAG
AATCAGTGAAAACAAAATGACGAACACAATTCACACAGTGAACCTCCTCAAGTTTTAGCT
CTAGAAAGGCCTACATATGGACCAGAAAGACAAACATATCAGTCTTCTGAAGAAAACAAC
GCACATAGATGGTTGCATGCAGTAATATTTCTAGATCCGCAAACAGTACTTCCAAAAAAG
CATATGCAGGAACATGTTTGCATGAAGCATACAAACTTACAATGTAGGACTTGATCCTCT
GAAGCATCAGGTTGCCTCGAGAATAATTTCCCTCAATGGGCAGGATTGACGCCCTCCCTT
GATTTATTGACAATTTTGATTTAGGATCAGTCAATATTATCACATCGCTTCTTGGCATTG
ACACCTACAGAGTTCTATAAATAAGATCAGAAGTTAAACAAACAACCACGCAATCGACTA
TGAAGGAAGACCATGTGTTACTTCTACTTTTTGAGGATTCAATTTAATATGCCAGAAGGC
TACAAAAAATGCTACATAAAAAAGGGAGGAGGGGAATCACAGTGGTATCAGTGTTCTATT
TTACAGTATTCACTGTAATTTCTTCTCTATCTCTACTACCATTGAACTGCTCTCAGTATT
CTCTTAGCTGACATTGATTATTAATTATTCCCAACATGATAATAAATTGAATTATATTCA
TAGTCAGTAAGTTAGTTGCCAGCACAAACAAGAGGAAAAGGAAGATCCACCTGTATGAAG
CTGATGAAAGTGTTAAGAATGGCCATGGACCTCTCCTCCTTGCCATAAGAATGCTTTCCA
ACAGTTAGAGCATCGGATGACCGTTTGCCAGCCCCAGCTGGGTCAGAACTGTATGTTGTG
AATACTGTAACAAAAGAAACATGTTCCCCAGGTTCACTTGATGCACCTATCTTATTCACA
GCTTTAAGTCCTGAAGGAAATGGTAAAATGTAGTCAGTAGATACACAACAGATGCTGATT
CTGTTCACGCTACAGAAGCATGAACAATCGTACGTGGTGTCCTGCAGCCTAACTGGCACT
AGTAAGCATACACAGAGCATTCTAGACCTTGATAACAGCATGTACAATCTTTAAGCACTG
ATAACAGTATTATTTTTGTATCCTAATCTCCTTGGAGCTGCTTCAAACTGGTGCAATGCA
GTTAGAGCTTACAGTACATATGAGGATCACAGGTCACAATGTGAGAAACCGAAACTAAGA
GGAGGAGAAACCTTGGCACTGGAGGCGGTCGGGGCGGCCCTGGCCGGCGGCCGGGCCGAG
TACGAGGCGATCGGGACGCTTCAGCAGAGCAGAAGGCGGCATGTCAAGGGCCCTCTCCGG
CTCCCAGCTCAAGCGCAGCCTGGAAACTGCAAGAAGGGGCACCAGATTGGATCGTCAGGA
GGGCAAACCGCGCAGTGTGTGTGCGCGCTGGAAGGAATCGAGAGGTGGAAGGCGTCGCGG
GGCCGCACCGGAGTAGATTGAAGGCGCGAGGACGACGAGGAGCAGGAGCGGGATGAGGGG
GACGGCGCGGCTTCGGAGCCTCGAGATCGCCATGGAAGCGGCGGCGGAGAGGAGCGAAAG
CGAGTTTCCCCTCGGCGGCGGTGGATATTTTACATTCAGCCACCGTTCTTCCGCGTAAAT
TGCATTCGTGTGCTCCAAACTCCAGAGATTCCGTGCAGTCAGTATGAGAAGGAGGGCTAG
CAATGCAAATATCTAAGTTCAGAAAAGCTCTCGCGCAAAAAGCACAGCACCGCCACGCCA
CCGAATGATTCTGATTCTCCCGAAGTCCCCATCGCCATTGGTACCTCTGCCCCGCCCCCG
CGGGAGGTAAGGTAAGCGGCAACACAACGCAAACTCCCAGCCCAGAGCCCTCGAGAGCAT
CCCTCTCCTCTCCATCCCCGCGCGAGCCCTCTCGTCCAGGCCGGTGGCCGGGATGTCCTC
CTCCTCTGCCGCCGCCGTGCCGGGGGGCACGCCGGCGGACGCCCTCCGCCGCAACCGTAT
CCTCTCCAGCAAGCTCTACTTCGACGTGCCGGGCTCCAAGGTCAGTCGTCCGGCCGGGAG
ATGCTCCTCCGGTCACCCCGATCACCCGCTAATCCGTGGTTGGCGATTGCTTGGCTTGGC
AGGCTCCGGTGGTCTACTCGACGGCGTACGACATCGCCTTCCTCGGAATCGAGAAGATGT
GAGCTGCTTTGCTTCCCGTCCCGCCTCTCCATCATTTCCTTGCCTAGCTGCATACACGTG
CACCGGACCACGGCTTACGCGCATCATGTGCTGTGCAGGCACCCGTTTGATTCCTCCAAA
TGGGGCCGCATATGCAGGTTCCTCACCAAAGAAGGCCACCTGGAGAAGAACCGGGTGGTG
GAGCCATTGGAGGCTTCCCAGGAAGATCTACTGGTGGTAGGAAAGGAGACAATCTGTTTT
CACTTGGTTCATACTGTTTCTTCTTCTTCTTTTGATTTTTGTCTGATCCCCTTTAAGTTT
GTTCCATCATTCCATGGCTCTGCTTGGCCAGGTTCACACAGAGGCATACCTCAACAGCCT
CAGGAGCAGCTTCAGGGTCGCAGCCATTGTAGAGGTACTAGGTTCTCAGAGGAAGCTGAA
TTTTGATGGCCTGATTGATAGCAAATTACAATGGCACGGTTTGCTAAACCAGATGTTTTA
TCTCAGGTTCCTCCGTTAACGCTCATACCTAATTGGCTCCTACAGCAAAGGCTACTGTAC
CCCTTCCGAAAACAGGTGATCTCTTGTGATTAGGTGCTCCCACCTGTACTGAAAGTACCA
GGTGCATAATTTGGGTGCCACTGCCAGGGAGTCTCTGTAAGCTAGTTCCTTTTTCCATAG
GTGGGTGGGTCCATTTTATCAGCTAAACTTGCACTTGAGAGAGGATGGGCCATTAATGTT
GGTGGAGGGTTTCACCATTGTTCGGCGGAGGAAGGGGGTGGATTTTGCGCGTACGGTGAT
ATTTCGCTCTGCATTCAGTTTGCGTTCGTTCGTCTGAATATTTCAAGGTGAGAAACCTAT
ACTAGCTGGACTCTAACTGTATAAACTATGGAGTGTTCCTTTAGTCTCTGCAAACTACTC
CCTCCGTCCTGAATTACTTGTCGCAAGAATGGATAGAAATGGATGTATCTAGAACTANAA
TACATCTAGATACATCCATTCTTGCGACAAGTAATTCTGGACGGAGGGAGTATTTGTTTG
GCTTATACAACGTATGTGCTTGCCTGACGGCTGTAAATATATTCTGTGAAATATCTGTGT
TGTTAAGCATCCTATGTCAACTGTCATGCCAATCTTGCTTTATTCCCAGGGAGATTGCTA
TGCTTGTTCACATCTTAGCAAGCACTCTATGCTGCTTGGCTAGTTACGTAGTACATGTGT
GGCCAATGAATGCAAGGATGTATCTCGGAGGTGCTCATAAGGGTAGGGTGTGCGTGTGTG
TGTTCATAGGGGTGAGTGTATGTGCTTGTATATGAGAGCTTGCGTCTGTACTGTGCTAAA
AAAAACAATGTGTACATTGCTTACTAACTATTTTAGCTTCATAAGCACCTATTCCTTTTT
AAATACTTGCAGAGTAATGATCATAGATCTGGATGCTCACCAAGGAAATGGTTATGAGAA
GGATTTTGCTAATGATGGTATGTCCTATATTTTGTTCTTCTATGCATTTTGTTTTCACTT
CGATGACACAGTGATGCCAATTTTCACTTGCAGGAAGGGTTTACATTTTGGACATGTACA
ATGCTGGAATTTATCCCTTTGTAAGAACCACAGTCTAGAATTCTTGTTACACCTGCGGAA
CGTCAAGCTTTTTTTGCTGCTGCTGGTTATCCTCTGACTACCCTTATGCAATATGTGGTT
TAGCATTTCTTATGGTGTAGAGGTTATTTATCTAGAATTTTTGTCCGTGTCCTGGTAATG
AGCATAAGTTTTCTTCCCTACCCCATAAATGCATATTCTACATCATGTTTTGGAAGATAC
CATCCAGTTCAGATGGTGCAAACAGGCATTTACCAGAACTAAAAAATAGTAGTCGCAGCT
GTGTACTTCAAATCAATTTTTAGTGTTGCTATGATATCTATAACACCCACTGTCCGAAGA
TTAGTCTGTTGTCATTGTCACCAGCTCTAACTTCAGTCATTGTGTATTATCATTCCGTTT
TATTTAGTAATTAGTACTAGTATTATTTCTTATGTTCTATGTGAACTGATGTAACTTTAT
TTTAGGATTATGCTGCTAAGCGATATATTGATCAGAAAATCGAGTTAGTTGTAAGTTGGA
TTTTGCTAGCTGTTGATCATATTTTTCTTCATCTAATTCAAATATGAGTTGAGTGCATTA
TTGTGCATTTTCAGAGTGGGACAGAAACAGATGATTACTTGGATCAGCTTGACAAGGCTC
TGAAGGTACCTTTGCACTTATAGATAGGGTGCTCACTAATATTTGCATTTCTACATAAAG
TTGTCCTATGTACTGCAATTCTTAGGGAGAAATAGGTGAAAAATGTTATGTCAGGTGCCA
TATATGATACTCCCTTGTTAAAAAAAAAACCCGAAGTTCTAGGATTTTCCTAAGTCAAAC
TTCACTAAGTTTGACCAAGCCTACCTAAAAAAATATCAGCATGTACGAAACCAAATTTAC
TTCATTAGGACTCCACATCACCACAGCTATTTGTTCTGGCTGTCGACGCGCTGGGCCGCC
TCATGCACCGGGCGCTCCAGACTGGCATACTTCGGCTGCTGCACCCCCGTCGTATTGTTC
CGGCCGTTTCATCATACGCCGACGACGTGATGCTGTTTTGCCATGCTGAGATGGATGA