Contig Data
morexGenes
Links



Map Locations of contig_137543 (4587 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137543

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6435 1 649 bp MLOC_6435.1 Available Available LOC_Os02g57350.1, FRAME:+1, EVALUE:2e-14, 13102.m06609 protein expressed protein





CDS Structure of MLOC_6435






Contig Sequence (4587 bp)

>contig_137543 4587 assembly3_WGSMorex_rbca.fasta
GTAGACTGGCGTTTCATAACAGGGCTGCAACGCCACGGTTCGTGGCGTTTCCAAAAGGGT
CAAAACGTGAAATACTTTTGAACCGAGTTCATTACGTGATCAACTTACGCCTTAAGGATC
AAAACAGTAAAAAAATCCCCAACGTTCCTTGTCAGTTGTCACGTCCAGTGGTCTCGTCTC
CATCTATATATAGCCACTTGCACCGTGATGATATGGATTTGGTATTATGTACCCCCTCCG
TTCTTAAATATAAGACCTTTTAGAGATTGTATTATAGACTACATACGGATATACATAGAC
ATATTTTAGAGTATAGATTTACTCATTTTGTTTCGTATGTAGTCTTCTAGTAAAATCCCA
AAAAGGTCTTATATTTTGGAACGGAGGGAGTATATTGATATTTATTTCGATGTAAAAAAA
ATGATCCACAGCGACTATTCGGTGACCGAGCATCACGCAAGCGGAGGCCTGCGGGTCGCG
TCGGTCGTGCTGGTCAGTCAACCACGGCCCCCCACGGTCGGGTCGGGCCGCGTCGCGGAT
CCATCATATAACATGCTACACAGAGAAAGGAAGGAGACTTGGAACTGGACCCAAACAAAA
GAAACGAAGCAGTGGTGGCCTCCACGGTGCTCGTGTACCATCACCACATGGCCCGATCGA
TCGACGACTCACATTCTATCTAGCCCGGGTCAACGTTCTGCTCCGGCCGTGTGATACATA
GTGAGTGCCGTGGTGAGAAACTTCGCGGTTCCTTCTCTGTGCCTCCTCCTTGTCGCCATG
GCCTGTGTGTCAAAGTCAAGTTTCTAGGAAGTAGTATCAGTCTATCATGCATCCATCGTG
TTGGTGTTGGGACACGCATGCACGACCCCATGAGGCTTTGTTTGATAGAAGTAGATTTGG
GAGAAGGGGATTTGATGAATTCCATCTTTTCATCCAATTCTCTTAAATTCTCGAGGTTTT
GCTTTCATCAATTTTTTAAAGAGGATTCTGAAATAGAAAGGGATTAAAGGGAAACGTAGA
GGATTCAGCTAAGCAAACCCCTCCTATCAAATGAATGTCCAAGGTTGTGTGAGGTTTCTG
ACACTTTCAATAATTTTTCTCTCGAAATCTTTCGAATTCCTTCGTGCCAAACGAGACCTA
AAGGAAGAAAGGAAGGATCAACCTTCCACCCAATTCCCGCTCGGGTCGGAAAGCAAGCGC
AATGCTTGGCCGGCCGGTCGGCCGGTGCCACAGAAAGGATCCACCATCCTACTCAAAATT
CACAAGCAATACCGTCCGTCCGCATTTTGCTCCTTGTGAAAAATAGGGACGTTTGCTCCC
TCATGAATCCATATTTTGTCGCACCAAAATACAGTACCACATCCCCATGGCCACACGCAC
GCATGGATGGGCTGTGTCTACCAAACCCAGCACATGGGCCAAACGAACGGTGTACAAGCA
GTATATTTGCAGTGGCGTACAAAAAGACTCATGAAACAGATTTGCCACGGAAATGTTTAA
AAAAAAATTGAATGTGTGCAACAAAGTACTATTTACAATGGTTTGCTCAATAAATTCTGC
ATGTTCAAAAAATTGAATTTGCCATGCGTCAAACATATAAATTTGCCATGATAGATAGCA
AAAAATAATTTGTCATGTTAAAAATAATTTCCATGGATTGTTAAATAAATAAAAATTTAC
CAAAGATTATTCAATAAATTTGCCGTGGTCTAAAGATGAAATTTTCAATGGCTTTGAAGT
AAAATTTGCTATGGTTCAAAAAGTGGATTTGTCGTCGTTTCTAAACCAAAATTTTCATGG
CGTAAAAAAAGGATTTTCCATGGTAAACAAATTACATGCTCTAAATAGCTTCCCTTGGAC
AGCACATCCAAACTAGCAATCTGCAGTCTACAAAGGCCATGCTCCTCTCTCGTCGCATCG
TAGCCATCAAGGACACCTCCGCATGCCGTATCGAGATGCACCATGAGATTCACATCCTCG
GTTACCTTCGTCCATGGCCCTCGGCTACTCCAACTCCGCCAGCGCAACATCATAGATCCG
GCCACCACCAATGTAGCCTTGGCAACCAGCGTCGTACCACCTAACCTGCCTATACCTTGC
ACATCATGCTTGAATAAATGTCTGGAACCGTCGGGTAACAATGACAAAATGCTGGGATGT
CGTTGTATTGGTTCGTCAGAATGGAAGAGTGAATCGGTGACAAAGCGCCTGTTCGGCAGC
TCTCCGCGGAGGAGGCTTTAAGCAACTCTTCAATTTTTTACTGGATGCCACTCCGCTCAG
GCACGGAGTCGCGGAGGAAGCTTTAAGCAACTCTTCGATTTTTTACTGGATGCCACTCCG
CTCAGGCACGGAGTCGCGGAGCGGAGGGAATCCGAACACGCCCAAAGTAGGAGATGTGAT
GGAGAAACGGGGAATGGTCACAAGACAATGAAGAGGTAAATGGGGTAAAGGGAGCCACGT
GAATGCTTGCTCCGTTGCGCGAACTATTCGAAAGCTGAAGTGGCATAAGCTTTGCTTTAA
GATCGGTGCGAGTTGATCTAATGATTTTGGCTCCCGAGCTCACCAGAGGCCTTTAAATTC
AAACTTTAAATTCAGTAAAAATTTGTATTNNNATGTTTCAAAAAATTCTGAAAAAATACA
TAGATAGATAAAGGTATAATACACAAGTGTGTAAATTTTCAGAACAAAATACGTTGAAAT
GAGGGCTGTGCAAAAAAGATAAATCTGAGGTTGTTTAACACATGTTACTATTCATCATTT
CAGACTATGAATTTGTCTTTTTTGTACAGATCACGTTTTAAAGTATTTTGACCTGAAATT
TTACACACATGTCGGTTATATCCTTACATACATGCATATTTTTTCAGAATTTTTTGAACC
ATAAAAAAATGAATTTAAAATTTTCAAAGATAAAGGCCTTTATGGAGCTCGGCCTCCAAA
ACGTCATTCTCCCACACTTTGCCTAAGATTAGTTATGACAAAGTTAGTCATGAATCAAAC
AGGCCCTACGTAAGTGGGCGCGTTGCTGCCCCTGAGGTCTGATTCTCTTTCTCATCTCGT
CTCAGTAAAGAAGAAGCAAGTGTCAAAAAAATACAGCGTAGGAAGGAACTGATACACATG
CATGGAAGCCAAGTCCTACGCGTCAAGTCCAGTAAAAAACATGAAGTTCACAGATTTTGG
AACATGGGTTCGCTGGGGATGGAGATCAGATCCCAGCAACAGCAACGCCCAATCAGCGTG
CCGACGCGGAGGAAGACGGACGCGACCCGAGTGCGATCAATGGGCTCGGGTCTTTACTTT
ACTCCTGCTCTGTAGAGCGATCCGCGACGAATTGCTCAGCTCCTTCCCTTGTGCTGCTGC
TGCTGATTTGCTTCTCCTGCGTGCCTGCCATCATGTGGTCACGGATCATCAATCTTTGCT
CCGTCCAAACCAGACCCACCCGGCTCGGTCAAAAGTGAGGGCCATGCCATTGGCCGGCGC
CAGAATCGCTAGGCAGTTTCCGGCAAACCCAAACCTTGTCCAAAGTTCGGTTTGTCATCA
ATGAATAAAAGATGGCAACGTAGTTTTGCCTCACCAGATCCTGCACATGGACGCAGTGTC
TCAATTTTTGCTTCGCCAATGCTCCTTCTTTGGCAGAGTGGAGATTATCATCTCAACCCG
TTTTTGTCTGTCTGTTGCTCTGATGGAGGTGCAATGTGGGAGAGCTGCTATCAATTCCAC
CGGTGGTTAAACTCAGTATGGCCAAGTAGTAGCATTCCATGCTCTAAAATGTACCCACTT
GTTGCATCCGCGAGTGGTCGATTTTCAGTACGTTTGACGAAGCAGCACTCCATACTGTAA
ATAGACCCTGCTTCACGTTCAGAGCTGGGAAATTGTGCGTGTGCGTGTGTTGTTCCTTCC
CAACGAAGGAACCGACGGATCCTCCCGTCGGACCGCCAGTCAAAGAGCAGTCCTCCTACA
CTCTCTCCACTGAGCTGGCCGAGCAGCACCGCAGTGCAGTCCGTGCATGGATGATGCATG
AGCTATAGGTAGCTAGCTAGCAGAGGACCGACGTGTTGAGTCGTCGATTCAGAAACCCAA
TCACATCGGACCGGACCGGACGGCGACGGATGAGCTGCTCCAGCGTACCTACACGGAAAG
CTCCGTCGCGTCCCCTCCGGTTGACCGCCGGTCCACTCTCCACACTCTCTCACTCGGCTA
TATAACCCAGCCCCGGCGCTCCTCGTTCCGCCACACTTCCATCCACTCCCCTGCTTCCTC
ATCAGCTCCGGTTCCTCTCAGCTCGGTCGGCGTGCGCGCGTGAGACTTGTGTGAGACCGA
GTAGCCTGCCTGCCTGCCATGGGCAAGAAGAAGAGCGGCGGCGGCGGTGGTGGCTGCAAC
GGCGGCGTGGAGAAGGTGGGGGCGAGGGAGTTCGCGCTGAAGGTGGCGATGCACTGCCGG
TGCCACGGGTGCACGGACAGGCTGCGGGCGGCGGTGCGGGACCTCACGCTGGCGACGGGG
GTGGAGGCGGTGGACCAGTCGGCGGCCGAGGCCACCGGCGAGGTGCGGGTGCTGGCGACG
TCCGACCCCGAGCGGCTCCGCAAGGGC