Contig Data
morexGenes
Links



Map Locations of contig_137527 (5432 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137527

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6417 2 1998 bp AK365357 Available Available None





CDS Structure of MLOC_6417






Contig Sequence (5432 bp)

>contig_137527 5432 assembly3_WGSMorex_rbca.fasta
CCCTTTAGCCCCCACAGATTCAGACCATTTTCTCAAATTAATAACAGCACCACAACTCTT
AACATTCATACTTTCAGCAAAGCAAGCTTTATCCACGTCTCTAGGAGATGGAAACCTCAT
AACAAAGGTATTTGGGCCAATAGATCTGGCCGAGCACCTCCAGTTAGTATTGATGTAAGA
GTTAAAGAATTCCTTCAACTGTCTACCAGATGCATGACCTTCTACCACAGATATCACAAT
AAATCTGTTTCTATCAGTAGTCTGGCTAGGAGTACTATTAACAAGTACTTCCTCTGTAAA
GAAATATAAGAGCGTTTAGATCACTAAACTAGTTATCTAAACGCTCTTATATTTCTTTAC
GAAGGGAGTATAATAATACTATGAAATAAATACATTATGAAAACATATCTGATGGTGGAT
ACATTGATAAGGAGTTGGTATTGATTATCATCATACTTGTATATATGTTCATGCTCGATC
ATACTAAAAAAAATTTGTTTTTGAATCATTTCATACCCTTCTTTAAAACTGGCCTTCCCT
ATAGGCCCACGACGAAAACTGGCAATCGTTTGACTGTTCGTCCAGACGACCGGGAACCGG
GAACCTGGACTAGAAAATCCCATGTCCCTCTCACCGCGTGATCAGGACTAGCTTCCGTTT
CCTCCACACATCCCCTGCCCTCCTATGGAAAATCCTCTCTCATTGACCATTAATTAACTA
CCCGTCGTTCGATCCCGGCCTTGTTTCCTTCAAACAGATTGTCGAGCTTACCTTTGGCTC
GTTGCCAGCTGAGCCGATTTCTGATTGATCCAGCACGTAACACGGTCCTGAATTCTCATT
AGCAGATTGCTGCTGCAGAAAACTCCAGCAGCGGTAGGAACGGTACGCAGCACTGCAAGC
TGAATTTCGTTTTTGATGAAACTGGTAAGCTGACTGTTTCAACGGCCGACCACGGCGAGT
CGGCAACCTTGCGGTGGTTCTTGAGGGGGATACCCGGCCGGACCATCAGCATGGTCAGCA
ACTTAATTTGACCCAACACCCTCCACACGTACGGAGCTCCCACGTCGCACAACTGGTCCT
CAAAATGCCATGGATTGCATTTGTTTATGGCCACACTTCGGGGTATAACTATGCATCTGG
TTTTCTGAAGTTCGTTTTCTTTTTGTTCATTAGGTAGCACTCTCGAAATTACCAGCGCAC
AAGAACGAACCAGCGGCACGCACTTAACTTGTTATACTGTAGTTAGCTTGACCACGCCAT
CGATCCCAAGTTCTCAGCCAATCAAAAGCACGACCAGTATGACCGGAGAATTCCATGGCC
GGCAGCAACAGTGTCATCATTATCTAATCTACTATCTACCAACCTGTCACACTCACACGC
AGCCAACTGAGTTTTGAGTGTGAGCTTGGGAGACTGCTAGTGCATGCGGAGCTGGTCAAT
GGCCGATCGAGGAAACGAATTGGCTGGCGTGGGCATGTATGTAAAGGGAGCCACAGAATC
CACCGGCCACCGCTCCACCAAAAGTACTACCTAGTGACACACCAGCGCTGGCATAGCATC
CATGACGACGGCGCCGACGCTTCTCCGGGCCTCCACGGCGGCCCTCCGGCGTCACGGCCT
CCTGCTCGTCCTCTTGCTTCCGCTCATCGGCTCTTCCGGCGTCGCGGCGCAGGGGGGTGG
CGCGGTTCCTCGGCAAAGGCGGCAGGTGGTGGACGTGGGGGTGATCTTGGACAGCAAGAC
GTGGGCGGGGAACATCAGCTTGGCGTGCATGGAGCAGGCCCTGGAGGACTTCTACGCCGA
CGCTGGCCGCGCCCGCTACCGCACCAGGCTGAAGCTCCACCTCCGGGACACCGGCCCCAG
CGCCGTCGACGCCGCGTCCGCAGGTACTTGCGCCGGGAACGGCTCCCCCTCTCAGACGGA
GCGGCAAGCTTTTTTTTTTTTCGAGGAGAGACGGAGAGGTAAGCTAGGAGGAAGACGGAG
TGGCGTGGGCATATGGGCCGAATCCTCTGCCGTGGGCCGAGCATGGGTGTTTCTTTCAGA
ATCCTCTTTCTCTCTCTTCCCGAGCCCTGCGTATGTGCCTATGTGGTTTGGCCCATCGGC
TCATCGGCGTTCTCTCATAAAAAAAAATCGGCTCGTCGGCGTGGCGGCGGCGCGGTTGCC
ATTTTCCCCGTCGGCGGCCGTGGCTGCGCTCCTAGCCACGCCCTCGGCTAGTCGGCCGGC
TCTTTCCTTGCTTCTCACGACGCCGTCACTCCGCCCTCTCCGGCATAGAGAGAAGGTATC
CCTTCTTCTCCGCCCCCCCATCTCGTCGCGGAAAGTAATTTGGAATGTCTTATCCCTCGA
ACCCCAACTAGAAATCTGCCGTGAACTCCGGTCTCCATCCATGCCAGGGAGAGATTAGAT
TTGGAACTGGAGCATACGAATTGGACGCATTCCCGATTTACTTGAAAAACTAGGGCCGTC
AACCAAACGTGTTCTTTATTTTTCAAGCACAAATGCACTTATGAATTTGTTATTAGCTGA
TGTTAGGGTAGATCTGACATTGCTACTCTGAGAGGATTTTAATCAATTTATCATGTGTTA
TGAACGAGAACCATTAAAAAGTTTCAGTGCTGATATGTACCTACGTGCTACGGTTTCCTT
GCAGTTGTTTGATAAGTAGAAAGCATTAATTCGTTGTGAAATCTCTCTCTAAGTAATATA
AGAATTGCAGGTGTTGATCTACTGAAAAATGTCCGAGTGCAAGCGATTGTTGGACCACAG
ACGTCAACTCAGGCTAAATTCCTTGCGGAGCTTGGGAACAAATCAAGGGTTCCAATCATT
TCATTCTCCGCAGATTGCCCGTCACGATCCGGACTAACTCCATACTTCATCCGGACTGCA
TGGAATGACTCCTCTCAAGCAAAAGCTATTGCCTCACTTGTTCAGAATTACAATTGGAGG
GAAGTCGTCTCAGTTTATGAGGATGATGATACCAATATCAAATTCATTCCCGACCTTGTT
GATGCCCTCAAACAAGTCGACACTCGTGTTTCATACAGGTGCAAGATTCATCCCACAGCT
ACAGAGGAAGATATGAAGACAGCTATCTCAAGCTTAAGACAAAATTGGACAAGTGTATTT
GTTGTGCGTATGTCGCATACTTTGGCTCATAAGTTTTTCCAGCTTGCCAAACAGGAAGGG
ATGATGAGCCAGGGCTTTGTCTGGATTACTGCGTATGGCTTAACAGATATCTTTGATGTG
GTTGGTTCGCCGGCACTTGATGTGATGCAAGGAGTTCTTGGGGTGAAACCTCATGTTCAA
GATACCGTGGAACTTCAGAACTTTAGACAGAGATGGCGCAAGAAGTACCGATTGAAAAAT
CCAGGCACCTCATTAAGTGAGCCCACAGTATCTGGCCTCTATGCTTATGATACCATATGG
GCGTTAGCATTAGCAGCAGAGAAGGCTGGATATGTGAATTCAGGCTTTGGGCTGTCCTTA
ACAAAGAATGGTTCCACTGATTTTGACAGAATAGATACTTCAAAAGCTGCTGAAAAACTG
CGAGGTGCACTCCTAAAGGTCAAATTTTTGGGCATCAGCGGGAAATTTCACATTGAAGAC
ATGCAGTTAGTATCATCAAACTACACAATAATCAACATTGTTGGTCAGGAGAGAAGAGAA
ATCGGTTTTTGGACTCCAGGGTTTGGCATCTCTGGTAATCCAAAAATGAAGTCTGATCTT
AACACCATCATATGGCCAGGATGTAATCACTCCTCTGGATGTAATGAAACTTCACCTAGA
GGTTGGATACTTCCAACGAATAAAACTCTCATAATAGGCATGCCTGTGAAACCTGGGTTT
GAAGGATTTGTAAGATTTGAAAATGGTACCGCCACAGGGTTCTGCGTCGATGTATTTGAG
GCAGTAGTTAAAGAATTACCCTATCATGTACCCCGTGTCTATGAGCAGTTTGGAGACGGG
GAAGGATCGAGTAACGGAACTTATGATGAGCTTGTCTACGAAGTTTATCTTAAGGTATGC
ATTGTTTTTTTCTGTTCCATTCTGCTTCATTGATCATTGGTCTTTAGTATTCAAACATGT
AAGACCATTGTTAGGAAGTATTAGTATTAGNNNNGGAGTCCTTATTAGTCTATGTTTATT
TTCCTTGCACCTCAAGTCATGTGTAATATATATATGCCCCTTGGGCCTTTAATAAAGATA
AGTTGCTTTCCTAACATGGTATTAGAGCTTAGGTTATTTTTTTCCGGACGCCGCAACTCG
CACTCGTCCCGCTCGCAGCCTCGGCCTCGCTCTCCAGCCGGCCCGATCTGATCGCTAGCT
CCTGCTCGAGCTCGCGAGATCCGCTGGACCCACTCGAAGCAGGGGCTCAACTCCCGATCT
CCTCCTGCTGCTGTTGTGCCGGCCGGATTCCGTTCCCGCTGCAGCCGCTGCTGGTTCCCG
TCTCCAGATTGAAGCGCTGAAGCCACTGCTGGTTCCCGTCCAGATCTATCTCTTCTGGAT
CGATTGTTTCCGCCACGATGTCTGCCTCCTTCGACCCTGGTGGAACTGAGCCTAGCCGTC
CCCTGCATCAACTTGGCCCTGCTGGACCGATGCGCCGCTGGGCTTCTACACGCTCGCTGT
TCGAGCCACGGGCCGCCTCCTGGGACTCTCGACGGCCGTCCGTGTTCATCCCTCCCAGAT
CGACGATCGCCGCCTCCATCTACGAGGTCACCGCCCTCCATGCGGCCGTCGGGATGCTGC
CTGCCCCAAGCAAGGACATGGCGCCCTTCTCCAGGATGTTGTCCCAATCCATGCTCCAAG
GTCATGGTCCAGATCCGTGCACGCACAATGTTGAGATCGCGGCCCTCGCAGTTGCCCTGT
CCAGATCGAGGCTGCAACTGTTGCCGTTCCGCCTCCAGTTGCGTCCCGAGCGTATGTCTC
TTCCCCGTGGACATGCACGAGTCTCTTCTTGAAGCAGCTGTTAGCGTGCGTGCTGCTCTG
CGTGCTTCCGCTTACATGATGCTGCTTTGCCACTCCTCTTTGCTAGCTTGTGTGCTGCAT
CTCATGCTCCCCATGGCCATTTACCATCGCTTGGCCTGCTGCTACTCTGCTGTTTTGGTC
TCTGATTTTTTTTTCCGCTGCTATCGCATCTAGTCTCAAGTTTAGTCTATGCTTCTAGCT
TTCTTTTTTTTTTGCTGCGTCCACCAAATTCGTTGATATTGTGTGTTTTTCATGCCATGC
GAGTCCACCATACCTTAGTCTGTCAGCCTTTCTCCGGTTCTGATCCTTCCGATGCAACTT
TTGTGGCCTATTTGCCCTTGTTGTTTTCTATAGGATTTCGTGGACTTCTTTTGCATTGTC
AATCTATGTTCATCGTGCCTTAACCGCCGAGCTTCTTTTGCCGTCGGTTGTCGTGGACTA
CGATTTTCCGCGCAATGCTTTATTCTCTTGAT