| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_137484
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_6391 |
1 |
2361 bp |
MLOC_6391.1 |
Available |
Available |
LOC_Os03g57510.1, FRAME:-3, EVALUE:0.0, 13103.m06307 protein CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
CDS Structure of MLOC_6391
Contig Sequence (10694 bp)
>contig_137484 10694 assembly3_WGSMorex_rbca.fasta
TTATTACGTTGCCTCTAGGGCATAATTCCAACAGGGTTCACAAAACCTTCCATGAGCGAA
GGAAGTTTGCCCCATATCAATTTGCGAGTACTCGTCATCCACTCAATGCAAAAGAGACGG
GGGTTCATTCAACAAGAGTGCAATACGTATTGTGTCGTGCTTGAGAGCATCCAAGCCCCG
TCCCGTGAGTGGCCTAGGTGTTGTTGGCTTGCTACGAACCTCTCGCTTTTTTGTGTCCTT
TCATGTTGGCATGTTGTTTATTGTGTAGGCATTTTGTGTTCATTCATGTTGTGTAGGCAT
TTCAATATTTGAAAGCCTTCAAGTCACGACACAAGAACAAGTCATTCACCCTCACGCATT
GTTGGGTGTTCATCAAAGATTGTGCCAAGTTCAAAATCCAATATGCTGCTCGTAAGAAGA
AAGGATGAAAGAAGGTCGTGGCTGATGAGGGAGACTTGTTCAAGAGGTCGAGGGGCAAGA
CAGGTCCGAAGGCCGACGAGAGGTGTGATGCGTCTTCCATTGTCTTGCAAGGGACTTTGG
AGATCATGACGAGCCGAAATAAAATGAGAGATGAGAGGAGGAGCAAAGAAAAGGAGGTGC
AAACGAAAAGTATCTAGAGCTCGAAACGAAGAAGCTTGCCATGAAGGAGGCCGCTGGAAG
GAGGAAGCTTGACATGAAGGAGGCAACGAAGAGGAGGAAGCTTGACATTGAGGAGGTCGC
TCAACTCAAGAAGCTCGAGATCAAGGCCACCATAGCGGGCATCAAAGCTAAAGAGGTGGC
ACTCATGTTCATGAGCGTGGACAAGAACAACATGTCCCCGGAGAGGAAGGCTTGGTTTGT
GAATGGGCAAAAAAAGATATTGGCCCGCGACGACCTGAACTAGGTGACACCTCGGGTCGT
GGACAATGTTCGTTCATTTTGAAGGTTGGGTGATGTGTGGCCGCTCGCTTTGTTGCCGGC
GTAGAAAACTTGTTTATTTTGAGGGCTGTTTTCTGTGCCCGCCACTGACTTTGTTGTCGG
CGTCAAATATGTCTTTTTTAAAGGCTGGCTCCTGTGCCGGCCACTGACTTTGTTGCCGGC
GTCAAACATGTTCATTTTAAAGGCTGACTCATGTGCCGGCCGCTTGCTCTAATGCCGACG
TGAGACTGTAGGATGAGTATTTTGTAGGCTGTCGTTGTGTTACTGACCGACGTGAACTAG
TGCAAACCACGACCGCGTCCAACAACGTTTATTCTATCCATGTTCATATGACGCGGACGA
GATAGTGTCGAAGACGCAACTGTGCTTTGGGCGTCCGGCCGATACAAACACAGCACCGAT
CCAACACGGCTTCATTTCATGATTGAACGGAAGAAATCCGGATAAAATCGGACGTCTACT
TAGGATCGTGCGGTTGGAATTGTCCCTAGATCTTTGAATCGTGTGATCAACGTGCCATTG
TATGTACAAACATGCTACTACTTCCTGGCTCGCTACCAGCCTGCCAAGAGTAGTACACAC
ACACCCGGCGTCCACTTTGAGGCCGAGTCCTGCACTCGTGTGACTGTCACCCACGCACGC
AGGCCGCAAGGTAGGGGGAGAAAGACGGGGAAAAGCCGGTGGGTACCAGCCAGGATTTGT
TACCGGCTGACCAGCGATCCGGCGCGGGCACGGCACGGCACGGCGACGGACGGGTGGGCG
GCACGCAGCCAGCAGCGGAGGGCGCCGGGTCGTTTTGCTTTGTTATTATAGGCCAGCGGA
TGCGCTGCCGCGTTGATTTGTTATTAATTATTACGCCCCCCCGCGCAGCGCATGCGTCCG
GTGCGGTGTCGCGGGCGGACGGACGGACGGAGGCGTCGGTCGGTGTCGGTGTCGGTGGAG
TCGGGTCGCACGTCTACGCTTGGCTTGGCTTCCGTCGGTCGATCGAGACGGGGACGGGGA
CGGGGACGGGCTTTGACCAATTATTAAGTATACGGGGGCTCTCATTCTCCCATCACATTT
CTTTCTCACGTTCTTCTTTTTTGTAGCGCATTTCTTTCTCATGTTCGGGCGGGCGGGCGC
ACGCACGTGTGTGTGGGTTTGTTTTGTTGGTTGGGTTGAGTTTTTTTTGAGGGGTTGGGT
TGGGTTGAGCTGGGCATCACCTGCGCGTGCACATGGAGTATGGCATGTTTGATCGCCTGG
TTTACTGCGTGCGTGGGCAGCTGTTCCGCTGGTGGGACATGGTGTGATTCTCGACCTCTG
CTGTTTCGCTGCCAAATCATGGCGACGAGGGAACCATGCACGCATGTTTGGAACGTGCCT
GAGACCATATTGCGTTAACCTAGTCCAGAGGGAACCTTCTTTCTCCCCACAAAATAAATA
AATAAACGCACATACATCCATCTGCATATTGTTTTAACCTAGTCCTGAGGGAGCCATGCA
TGAGGGAACCTTTTTCTCCCCACAAAAGAATCAACCACGATTTTGGGCGTATTTAAAAAA
AAACATTACTTTGCATGTATGTGTCCCATGTAAAGTGTTAGTTTTCTGTTAAACACAGTG
ATTTTGGAACTGCCCAATTCTTTTTCCAACGCTCAATACTACCCATAACAACAAGATACG
TACGTTTTTCTTCTTAAATATATGTTCTGTACAAGAGAGGCAGAGGGTGGTGTGTTGTTT
CTCCCTGTGTGGAGAAACATGGTTGTTGTGGCAACATGTTGGTTTAAGTAATACTATCCC
TTCTTTAAAAAGTAGTACTATTACTAGATAAAATATTTAAGCCATTATTAAAGTAAACAA
TACAAAGGGTTATCTAACAGGGGAAGTGCCCTATTCAACTCGCAGTGGATGACACGCAGC
ATGTGCTACGAGCGCGGCTAGTGTATTTCCAACCATGTTCTAAAGTCTAAACGAAGCTTC
TTCAGCAATTGGACAAGAACTCATTGATCTTTCCATGGAAAAAGATCTCATAAAGATAAT
CCATATCTGGCGAAAGTCGATACATACAAATACAGGTATGATTTTGTAAATTAATATATT
TAAGCTAAATGCAACAAAAGGCCATTCTTATTTATCATGTGTCACTTTAGAAACTATACT
TTTTTGTGAATACTCTGGATTTATATCAATAGCTTTCCATGATACAAGATATCCTAAAAA
CAAAAGAGATTACACAACGCGGTCTAAGTGAGACAAACAAACTCAATTTTCAGAATGAGC
CGAAGGTGAGTTGCCGCTGCCGCTACATCGTAGATGTCGTCACCCCAATGCCCAAGGGCC
TGCCTTCCACCCTCGATGCCACTGGATGAACGTAGCGTCATAGCCGTAGAGAGAAGGGAG
AAGAAAACTATTAGCTCAACACCAATAAGAAGACACATGAAGCGCCATCCTAGATCTGAA
GGACCCAAGACGGTGTAGACAACACCTCCCATATCCGACAACGATAGCCCATAGAGTCAT
TTGCTTCTATGAGAGATTCAGAGGAAACTTATTAACCACCGACATCGCCATTGCCGAAGT
CGAAGCCATGGGCATCTATAGACCAAACTAAGGCACCAAGAGTACTAAATGCATGTGAAA
ACAAGGTCCTTGGTTTCTCCTCCCTACCATTGCTGCCGTAGCAGCTGACGAAGATGAGGG
AACCCCGACGACACTAGAATCCATGGTGCCTGTTTGCTCCTCTCGTTGGATCTTCTATGG
TGGCTAGGGTTTCACGAGAAGGTACTTTTCAATCGATCCTCTAAATGTTGCCAATTTTGA
ATTTTGCCGGGTCTAGAAGCAAACGTTTTTTTGAGAACACATGAGGTCCATATATGCTTG
ACTCCATTAAGTTCATAACCTTTTTACGGGGACCATTAAATTCAGAATTGGCACAAGTTC
TGATAGTACCATAAATTTCCAAATCGAAGTTAGACCTAGAAGTTGAGACGAGAAAGTTGG
TTTGCAAATAAGGTGCAGAGAGCAAGAAAGAATAAATCTATGGGGTATGTTTTATTATAA
CACAGATTGTCTAAATGTTTTTTTCCACAATCATAAATAACTTGTTGTCGTGTTACCGCG
CCGAAGTACTGCTATAACCTCTCTTGTAGGAGTATCTTGTATGGAAGCATGTTCTGCCTC
GTGGTCTATTTGAAATTATAGTGAACCTATTCAGTTTACAGTTCCTTACAACTTTAACAT
AACCATCCTTCGATATATTCTCTGTTAAATGGGTACCAGCATCCAAGGGTCCATAGCTCA
GTGGTAGAGCAATTGACTGCAGATCAATAGGTCACCGGTTCGAACCCGGTTGGGCCCTTG
CTATTGTTTTTTATTTTTATTTTATCAATTTTTTGATGCCCACTGCTCTTAATCACAACT
AAAAAAAGGTGTGCGTGCAGTTCACCACGGTCGCCCACCGCAGTTTGGACCTTCTAGTCT
TGGGATTGTGCGTTGGCTGACTGCAATACGGCATATACCATTGCCCACTGCTACCATTTC
GTGCATGAGTTAACAGCACCTTCAGAAAAAGAATCAGTAACATTAAGCCTAGCCGGCAGC
GAAAAAGGTACTCCGGCAGAGCAACTGGCAGACAACAGACCAATAGGTCACAGGCTAACA
ACATAAAAATCACCGTCGTCATCATCATCAGGCTTTAATTAGTCCGTACCACCACTGTTC
TTACAACGCCGAAAAACGGACAATAATAGCAGGAGGATCGGTTTTCATTGGTCAGACATT
TCTTTTTGCCTACAGTACACACACACACACACACACACACACGGAGACAACAACCTACCC
TTACAAAAGCCAAGACATACTATGCCGCTATCCAATAATACAGATGAAGAGAATCAAACG
TAGCAGCTGGAGTTTCCACCTTCTCCCATAGCTTAGGGTCTCCCTGCCGCTGGTTTCAGA
ACGAGGGGAAAAAACTGAAGAAGAAAAGGACACCTCTCCTACTCAACTCTCATGCTTTTA
CTTACAACACGTGTACATGGCGGTTTCGCCCAGCATTTCTTACCGGCGCGATGGCGGCCC
GTGCTCTTGTGGATGTAAAATTAATTAAGAGAATCGTATAATGTCAAGTTGGGAACACCC
TAATGTCAGCTCTTGTGGGAGGCTTTTGGTACTCCTGCCGAAATTGGCTTCGCTTCAGCC
TTCAGAGTTCAGAGACCCCCCAAAAACTCGGACCGAGGCGCCGTGGAATCTTGAGATCCG
ATCATCTGAATACATGCTTGCTGTGGGAGCTACTCTGCTGCTGGGTTTACCTTTTGCGGG
TCGCTGAACGGCAATTTGGTTAACTACACCTGTAACAAACCAGAACAAACAGTCAGCACA
CATGGCGCATCTTCACCACCTCCAGTTTAGCAACTGAAGGTATTGCGACCGGAAAATGCT
GTAAGCCAGTGCCCAACTAGGACAAGAATGCGGAAACTATTTGAGTTCAGCAAGTATTCG
TTTTGCATGTACTTGAATCTCATTTTACCTGAACAGAAACAACAGTTGTGATTAACCCAT
AATATTCCATTTAGTGCAGAGAAATCACATACAATGCACATTTATTAAGCAAAACAAACC
TCAACATGATAGCAGAAGCTTATCATGATTTTCTGTACCCTTTATTTTATGTCAAACACT
TTACGCCACTTATTTCTTCCACATTTTATCTTCTTTTTTTTAACGGAAGAACGAACCTTT
AATTTATTCATCATCACAAATATGCATGTCTGTATAAGTCTGCTGGCTATGTATGATTTG
TACACTTCAAGACCTGTGAAACAAATTGCTCGTAACCTTACCACATAGTGGAAGTCACTG
CATGTTGCTTCATGTAATGATGGCTTGAAGGCATTAACAACCTATTGGAATGTGCGCTTT
TGTATTTCAGAAACTTATTTTCTCATCTATTTCTCAAACAGAAGCAAGTCCACTTTAAAC
GCTGAACTATGGTGTCAAGTCCGATTTGAACCCTGAATTGTTAAACCAACTATCCTTATT
AAAGTGTGAATTTTCTAGAACTGTTCAAGTTAAATAGCTCGTTTTTGTATTTTAGTGTTT
CCAAAAAATGTATTTTTTAACAGACGTAGAGAATGTTAGCAATTTATAACCTGCAATTCA
TAAAAGATATGTTTATTTATGTCGTGCAAAAACAACAAAGATAGATAGATTTGCCTTGTC
TTTTTTCCTACAAAAGATGAATTGTTATACTTTTCTATTATACCCTCTGTTCCTAAATAT
AAGACATTTTGGCAATTCAGTTTAAACAGACAAAATGTCTTACATTTAGAAACAGAGGTA
CTCCCTCTAATCCAAATTAATTGACGCTGGTTTAGTATAAGGTTAGTATAACTTTGTACT
AAACCAGCATCAATTAATATGGATCAGAGGGAGTAGTAAATTTTTGCAGGTTCCCCATCT
GTAGCATCCCCCGTGTTCACAAATTTCAACATTTCCAAATCTTGAAAAAACTGAATTCAC
CCTAAATAACCAGGTTAGGGTTTGGTGGGTGGTTCATATTCCGAGGTTCTAAAATTCTAT
TGAAACAACTAAGGGGTGTGCAGAAGCTATAAAGTAAGAACAAAAAATAATCATCAACCG
ATATGAGTTATGGAACAACATTATCTTCATCCATTATACTTTTTGGGTTTTGCACATTTT
CTTAAAGGCTAGAATGCAAAACCACCTTTTAAAATCGTCCAGGTTTTAAAATGGTTTTAT
AAAGTTCAGGAGATAATAGAGATGGTCTCATAGTTTAGGACTTTAGGGTACAAGTCGTAC
CAAGCACAATAGTTCAGGATTCAGAATGGACTTTAGAGTTTTGGGGCTTTGGGCTACTGC
AGCTTGAAGTGCTTATGGAGGATCCGCATAACATTCACCACACTAATAGTCTACCACAAC
CATCACAATTAGTTCACCAGAAATTTTGTCTTCCCATGGTTTATATTGGAACTGTAATAG
TGTAGACGCATGATTTGATACAACAATATAATCCAAATAACTAGATGAGTGTTATTGCTA
TCAATCATATGATTGTATCCAATCATACAGATAACTGATCATAGACTGAAACAACTCATC
TAACTCTGGCAAGGCAAATGAAAGCCATACGATTTTAACTCGGGAAGAATATATAATATT
ATCAATTAGCAGGGAAGACACCCATATGTTACCTTCGTTTACCGAAGCTTCAGTGCATCT
CCAAGACCAAAGTTCACATTGCTTTGCTGTCCCTTTCTACCCAGTGGATTATTTCCTTTC
TGCATCATTTCGACAAACTCATTGTAGTCGATCTTTCCATCCTGCAAAAGGTGGTGGACA
ATGAGACAAAACTGTTGTTGGCAATTTAAAACCTGAACAATGAATCTACTTACATTGTCC
TTATCGACATCTCCGATAATATCTTCAATACGGGTGTCTCCAATACCAAACTCCTCGCAT
GCCTTTTGGAGCTCATCTTGAGTAATGTAACCACTGCCGTCTTTATCAAAGTATTGGAAG
GCTGCAAAGAGCTTATCCTCCTTGTCAACTTTGTTCATATGCATTGTTGCAGCAATGAAC
TCCCCATAATCAATGGTACCACTGTTGTCAATATCAGCCTGACATATTCATGAAATGAGC
TTGAATTTCATTTGGAGCAGAGTCAAAAATGAAAACAGTGTCATCGTAAGAGTAACCGTT
ACTACTTGATAAACTTTCGCAACTATTGCGTATCTGAAAATACAGTAATAAGCCTCCTAA
CAACCCTTGTTTTCTGCCTACACAGAATGATATATGTAATATAAGCTGACTCACGGTTCC
AAATGAAGCAGGTTTAACAAAAAAAATCATATTTCAAGTGAGATCAAGATGGCGTTTGGG
CAGCGTGGGCATCAGCCGGGGCAGCCACTGCCTGCTGAGTAGGATTAAGGCACAGGATTC
TTGGCCAAGTGGTGCTTGCCTAAACTCCAAAAAGTTTCTATCTCCACCACAAATATATTT
TATTTCCAACTTATGGAAATGATAGAAATTTATTTAACCTCAATTGAAGAGTAAGGAGAT
TGTCTAGGTGAGGAACAAATTATTTTGAACAGTGATCAATAATTCCTGTGTAATTGAGGA
ACAAATGTACAGAGATCATCTTAAAATACTTACTGCTTCCATTAAAGCATCAATTTCTGA
GTCCATCAGAGTAGCACCAACCCGCCGCAAGCCACTTTTTAGCTCCTCCAACGTGATATG
ACCACTGTTATCAGTGTCCAGCATTTTGAACATTTCTTTCAATCCTGCAATTTCTTCTTC
AGACAAACTCTCGGCAATAACCTGCAATTGTATGTCAGGTAAAAATAGAATCAACATGAA
TACAGATTGTGTAACACCAATTACAAATTTGATACCGATACTCACCCGAAGGGCCATTTT
CTTTAGTTTGTTCATTGCAGAAAATTGTTTTAACCGACTCAGGACAGCAGAATCAAGAGG
CTTATCAGGAGCAACTCCATCAACACAAACCCAAGGATGACCTAGCACAAGATGGGTGCT
TAGAGGACATTTGTTTGAAAATAGAGTAATGACAAGTAATTATTATTTAGTACCGACTTA
TAGCTGCACTACCATACTACTCACATAGCGCTTCATGGGCAGTCAATCTCTTCTTTGGAT
CACGAATAAGCATTTTCCTGACCAAATCCTTCGCACTGTCTGAGATACTAGGCCAGGGTT
CAGTTGTAAAGTCCAGCTCACCTTTCAAAACTTGTTCAAATATCCCTTGTTCACTTTCTG
CTCGAGAAACCACAAGCAAAATCAGTCGGATGCAGCTTTCATACATTACGCGAAATCGTA
ATGCGGCATTTTACTGAAACAGTTACACATAACCTCACCATCCCAGAATGGAGGAACCCC
ACTCAACAAGATATAGATTATTACACCAGCACTCCAGACGTCAACTTCTCGTCCATAGTT
CTTTAGAAGAACCTCAGGTGCAACATAGTATGGACTTCCAACTACATCTGTAAACATCTG
ACCTGCAAAATCAATTACATTATGCGTCAGAAAAAAAACAAAATAGCGTTTGAAAATAAT
TTGGTAAAGAGTGTGAGAGCATCATTGGCTTCATCGCACATTCATATGGTCTGTTCTCTG
TAGTCAGTCATTCAGGGACAGAACACAGATAACATCTATACCACACTTTTCATATCTAGT
AGCCTGTTTCTAAGAAAAGTGTTAAGGATCTGCAGGTGCAAATCTACTTAAGTTACTACT
TCATGCCTCAGAAGGAACTGGCAATGATTTTTTTTTCATCCTATAATCAGGTTGTGTTAT
GGGCACCCGGTGGGCCATAAAGGTCAAAGGAGCAACCTTCCATTATCTGACCAAAGGATG
CCTAATAAAATGGTCTACAGTTGTTATCAGGCACTTCAAAATGCTCTAAGTTTACTGAAA
TGTTTGGTAGTAGAAAGCAATAAAGATATGCTATAGAATTGGATTGTACTACAGAAATCT
CGAATGCGAATCTGTCGGTTGTCCAATGGCAGTTGTGCAGTGAAAGCCCAGAGAAGAACT
TGTATCATGGGAGAGCCGATGAATTTGGATTTGGAGTCAGTTTTTCATAGGAAAATGGCA
TGACACTGCCTATTTCACTTATAAAATTATGATTACAAGCGTCAATTTTTCAAAGGAACC
GGCAGATCAATGTAATGGATTTTACATCCTGATTACTCCCAACCTCCAAAGGACACCAAA
GTAACATGGCCAAGGCAATGATGCTAACGGCAGCAATGGCAGCCCGTGCACAACAAGAGG
CCAAGCATTTCACCCGTTTTACCTTTCCGTTACGAACTTATATGATACATAGCCGATACT
CGCAGATGGCAATTTTCGCATAAACAATCCCCATTTCGCTAAATCAATTGTAAATTCGAC
TACGTCCAGGAATCGCACCATCAAAAGACAGATATCAGGGAATACACGGCATTGCATTGC
ATTGCATTATTTGAGGCGACTATATAATATATATACCTGGCGTGAAGAATATGGAGAGCC
CAAAATCAATGGCCTTGAGCGGCGAGTCCTCCTGATTATTGATGAACAAGAAATTCTCCG
GCTTGAGATCCCTGTGCATGACGCCGAGCGAGTGGCACGCCTCGATGACGCCGACGATCA
CCCTGGTGAGCTGCGCCGCGGCCTTCTCGGAGTAGTGGCCCCTCTGGATGATTCTGTCGA
ACAGCTCGCCTCCGGCGCAGAGCTCCATGACAAGCTGCACGGCGACGGCGTCCTCGTAGG
CGCCGACGATGGACACGACGCTGCTGTGCCCTGCCAGGTGGTGCATGATCTGGATCTCGC
GGCGCACGTCCTCGACGTCCTCGTCGGTGAGCAGCTTCCGCTTGGCGATGGACTTGCAGG
CGTACTCCTTCCCCGTGGCCTTCTCGACGCAGAGGTAGGTGGTCCCGAACTGGCCCTGCC
CCAGCTTCTTGCCGATGGTGTAGAGGTCCTTGAGGCGGGCGGTGTTGACGTCGCGCTTGA
GGACGGAGTCGGCGAGGAGGCCGGCGCTCTGGACGCGCTTGACCTTGGGCACGGGCTTCT
TCGCCACGGGGGCCATCGACTGCTGCCTGGACGGTTCGGCGGGCTTGGGGGGCGGCGGGT
CGGCGGAGCGCGCGCCATGCGAAGAGGAGTGCTCGCCGGCGGGGATGGTGACGGGCTCGG
GCGCCTTCTTCTCGGAGGTGGACGCCTGGAGGGCGTCGGGGGGTTGGGCCGGCCCCCCCG
GCCCCCCGCCCCCC
