| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_137471
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_6384 |
1 |
1462 bp |
MLOC_6384.1 |
Available |
Available |
LOC_Os11g09310.1, FRAME:-1, EVALUE:9e-61, 13111.m00982 protein zinc finger CCHC domain-containing protein 10, putative, expressed |
CDS Structure of MLOC_6384
Contig Sequence (3922 bp)
>contig_137471 3922 assembly3_WGSMorex_rbca.fasta
GCAGGGGACGAGGAGCGAGAGGAGGCCGGCCGAGCTCACCGGCAGTTTCAGTGCCATCTC
ACTGCCCGTGCCAGACACACCCCGCACGACTCGGCGGAGACTCGTGGTTAGGTCAAACGG
TTAAGTGGGTTAAAGCAAGAGCCGTAATGAACATTTACAATACCAATTACGGTACTCCCT
CCGTTTTGAAATATAAAGTGTATCAAAAAAATCTTTTAACTTTGATCAATTTTATACTCA
AAATAATAATATCGACATGTATGGAGTACTAAATGAACAAAATACGGAAATACATTTCAG
GCTATTTTTTTGTGCGGCTTATTTAAAATAAGCCGCCTCCTTCCCAGCTTAAAAATTATA
TAAGCTCACAAAAGAAAAGAAAAATAAGAGGCTCACAAAAGAACTGGTCCTTCATGATGG
TATTATGATTATTGATATATTTTTCTATAAACTGGTCAAACTTAAAGAAGTTTGACTTCT
CATAAAAAAATTAATGAGCCGTATATTTTGGGACCAAGGGGGTACATAGAAAGGTCATGA
TGTTAAATTGTATAAGCATCCATAAATGATAAGGTTTATAAAGTTTGCCTTTTCACCAAA
AAAATAAATTATGTGCTATAATTTGGGAATGGCAAGGTCAAATGATAATCTTCTCAAAAC
AATATCAAACCATTAGACAGCACTTAAGCACAACGAGCTTACAAGTTCACAGACTTCTAG
GTTCTTCGTAATAATCTTTAGATAAAAGAGGAGACTTCTTAGTACAGGGGAGAACAATAA
CAGGGAATCATCTAGCGTTCAGGAAATCAACAGATACATTTGTAATATGTCTTTTTGAGG
GCGCCTCACACGAAATCACAGCTATGATGAAAATAGGTGATATGTATGCGGAATTTGATC
ACATCTGACGTCCTCGTCGCGTACCCCGGTACTTCAAGAACGGTGCTTGTCGACACGCTT
CTTGCTCTTCCTCCGGCTGCCCTTGCCATCAGAATCAGAATCAGACTCGGACTCAGATTC
AGATCCAGAGGACGACGACGACGTGTCCCTCCGGTGCCTTCTCTTCTTCTGCTTCGTCTT
GCTCCGGCGCTTCTTCTTGTCCTCCGAGTCTGAGGAGCTGTAGCTTGAGCTGCCGCTCTC
AGAAGAATACTCAGAGCCAGTCCCTGATGATTCAGAGTCGGAGTCGGAGTCAGACACCGG
CGCGCGATGTTTCCTCTTGCTCTTTGACTTGCTCCTTGCCTTCCTTTTCTGAGACTTCTC
CTTCTTCAGCTTTTCTCTCGTCAGCTTCCTTTCTTCCTCCATCTCCTTCTCCAGATCAGG
GTTCACGAACTGGGAGGGAGCCGGCAGCCACGCCTTCTTCAGCCTTGGGTCCTTAAGCTG
GTCCGTCCTCGAGGGCCGCGATATATAGACTCGTTCATTCTTGCACTCGTATGTCCAGTG
CCCAGGCTGGAAGCACTTCTGACATTGGCCCCCAGCAGTTGCAGAAGCTGGTTCAGCATT
TGGTCTCACACCCAGCCTCACAGCCTTCTCGGTACTCATCAGATACATCTGCCTCTTGGC
TTCCTTCCTCTCCTGCCAGCGGCTTGGTCCCTCTTCCTTCTGCCCATAGGCATTGACATT
GCGAGCGGCAGCTTCCGCTGCACGTTCAGCTTGAGCCCTGCTCAATCCCTTAGCATTTGA
CAAGGCCTGTGCCTTTATCCGGTCAGCTGCAGCCTGAGAATCATTTCCAGACATCTTGAT
ACACCCAAGAAGAAAAGTTTATACAGGACCAGCAATCTCAATATCCTGCAACGAAACAAA
CACTACTGGTTACTAGTGAAGTGAGGTCATGGCTATTATAAATTTACGCAGGCAGTCATG
CAGACAAACAAGTTTAGACCTTTTCCATAATTCATTTACTGCATAACCCAAGGAATTTCG
TCACTTGGTAGGGCAAGAAAATACACACTGATGGCGCTAACAAAATCTACATAAAGACTG
TTACAGAACTGCAACCAGTACTGCTTAAAAATGAACCAAGTCAACAAATCAAACACCAAT
AGGGTATGTATACCACAAATCAACCTCTCACATATATGAACTGAACAATTATAGCTCAGA
TTTATTTTCTTGCAATTAAGTAAATAAATAGATATTCTACTAGGGTGCAAATAACATGAC
ATGGGAACTTTAAAATGTCATGTGGAATTAAAGAAACAAGTGCAGTGGCAATTCAAAGCT
ATTCACTAGCTAACACATTAAGAGCCACATCCAAGAAGAGAAGGTTATACAGAACCAGCA
ATTTCAATATCTTCCAAGGAAACAAACTATATTGGTTTTTAGCTAAAGAGAATATTTGTC
TAGCTGGCTAAAATTCACGCAGGCAGTCATGCAGACAAACACATTCAGACTAATTTCATT
TACTGCAACTATAACCCAAGGAAGTCCGTCCCTTGCAAGGGCAAGAAAAAACACGCTTAT
GGGGCTAACAAAATCTTCATAGAGGCTCTGTTACACAATAGCAACCAGTACTGCTTAAAA
AAATAATTTAACAAATCACCACATCAGGCGCCAATATGTATGTATATCGCAAATAAACCT
TGCCGTATATGAACTGAACAACCATAGCAGAGATTTGCCCGTCTTGCAGCTAAGTAAGTA
AACAGATACTCTAATTGGAAGTGCAAATTACATGGTACCAGAACCTTAAAATGTCACCAG
TGGCAACTCAAAACTATTCACCAGCCAACAAACACATTCATAGTTATATATAGCAAAAGC
AACACTTCTGCTTCAAGGCCCTTCCATACACATAAACAACCCATCTGCGTCAAGACTTTA
TACAATGACAAGGACGGAACCAACAGGCATCTATTTGGGTACATGTAAACAACAGCCAGG
AGGGACGGATCTGTACGGCGCACACCAGCACACGCAAAATTGGCGGAGGTCAGCGGGGTT
TAATCCAGCTAATCACCGGATACCGGAGAACCCATACCTCGAACACCAACGGCGGAGTCG
CGGACGGAGCAGAGCGGGGGCAGGGTCGCGATTTCGCGACGAGGTAGGACGGGAACGTCG
ACGGCGGCAGCGACGCACGGGTGAGGCGAGGGGCTCGGGGGGGGGGGGCGGGGGGAGGCG
TCGGCGGCGAGGCCGCGGCAGCGCTAGGGCACGGCGATGGAATGAGGGGCGATTTTCTGT
TGGAGCCGCGGCTCGGGTCGGGTTGGGGATTTTAGGAGTCGGCGGAGGGGAAGGGGGAGA
AAGATACGGAGACGGTGAAGGGGAGAAAAGTCTGCCGCGATCTGACGGTGGATCTAGGCT
TAGGGTGTGTGTAGTTTTTATTTGTTTTTGCGGCGTGTATTTCAAATAAAAAAAATCTAT
TGTGGTGATATGTGTTTATTTTATTTTATTATATACTAGCAGAAATGTCCGTATGTTGCA
ATAGAAGAAAAAAAATCCTTTCATGTTTGTTGGTCTATGTGATGCTATCAAGATTCATCT
TAATCAAAAACTTAATTATCTATTTGTTAATGTATCATACATGCACAATATATTTTTTTA
GAAAAGGACATGCCCAATACATGCATTTGCCTACATAAAAAATAAAAAGATCTGTAGTTG
AATGGCCATGCATTGTTATGTAGAAAAAAAATCAACTAATTGCAACTTCTTCATTTCCTA
ATTAAATCTAGCCACCTTGACCACTCTTATTTGTCATGTCACTCAAGTAACTAAAGTAAT
TTAGTCACGTCCAATGAAGGAGAAATGTCCGTGATTAAATAAAACTACTAGCAAAAGAGC
TCGTGCGTCGCAACAGGAGAGAAAATAACACATGCTCTGAACGCAATTTATTTTCACATG
GCATCACATTTGTGTTGCTGACGATGGCTTTAGTGCTCACACAACGAAAACGCGTTTGAA
TGTACAGTCACTCGGAATAAGA
