Map Locations of contig_137458 (5441 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137458

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6376 2 1736 bp AK354389 Available Available None





CDS Structure of MLOC_6376






Contig Sequence (5441 bp)

>contig_137458 5441 assembly3_WGSMorex_rbca.fasta
GGGCACCGGCTCCTTCTAGGAGCCGAACAAAACAGATTGATCTTGCTTAATTCCAAAAGG
TGTCCTTTACATGAGTATATATAACTTCTCTAGGCTAGAAAAGATAATAAACTGGGCTAA
GCCCCTAATACTATAAGATAACTAGGCCAGCTCTATTAACTGGGCCTTCTCAGGTTGTAA
TGTAAACCAGTCATAACAATGGTATTACAAACAAGAAGAATGCATCTAACAGACAGTTTT
GACCACTGACAAATACCTCCTTTGTCGGGCGACCATAGTCAACAGGATCCCTCCCTGTAA
TTGCCTCTAGAATAACAACTCCAAAGCTGTAAATGTCACTTTTCTCATTCAACAGTCCAG
TGTTTGCATATTCTGGTGCCACATAGCTGCAATGAGTAAATGCAGCACATTATTAACTAT
CAGTAACATAGTGTAACTGCACTCTAGCTCATTAGTTGCCCAACATACCCAAAGGTTCCC
ATAACCCGGGTAGTTACATGACTCTTGCCAGCACCAAGAAGCTTAGCTAAACCAAAATCT
GATACTTTAGCGTCAAAATCATCATCGATCAAAATATTGCTCGATTTGATATCACGGTGC
ACGACTTTTGGTTCAATTGCCTCATGCAAGTAAGCAAGCCTGCAATGAATTGAATTAAAG
TATTTATACGGCTAATTCAGAGGAGAAAAATATTGAATTAAAGTGTTACACAAGATAAAT
ATGGTATTAGGAATTCGTTCAGCTTAAGCTTCACTTCCATCGTGAATAACATTATGTTAT
AGAGCAATTAGTATTTAATGTAGCAGAATTAGCTCCAGGAAGAAATATGATGTGATTTTG
GGACCTTTATGATTGCATTATCCAACTAGCAAAATAAAGAATAAACGACACGACATTAGG
AGAAAGAAAGGGAATTTCTGGGAGAACTCACGCTTTAGCTGTCCCTAGAAGAATCTTTAT
GCGGGCCTCCCATGTAAGGGAGCCCCGGTGACTCATAGCTCCATGAAGCCATTGCTCTAG
GTTTCCATTGTTCACATATTCATAGACAAGTATCCTGAAATGGTCACTTGAAGTAAGGAA
CGATGCAACATAATTCCATACAATCATTGCAGTTAAACGAATTTTATGTTTTGTAGAGCA
TTGAAGATCAAGAATATTTTTTCTTGCTAATAACTGTACCAAGGATATGTAACCAACTTT
TTCTGTTTTGAATGCGATATGTAACCAATGAAAATAGAGGTATGACAGGAATATTTTTCA
ACAAAGGGTGGATTTTATTGACTCGAAATGAGGCATCAAGAGGATACAAACACAGTGAGT
ACACACCCAGCCTCTGCATAACTAGGATGCACACAGCCAACACCAACGCACACACGCCAA
AAGCACGCCAGCAAATAGCAAAGTCATACAAGACCAAAGGTATGACAGTGAAAGACAGTA
CAAGTACCTCTGAGTACCCTCCACACAGTAACCAAGAAGACGGACTAAGTTCTTGTGGCG
GACATGACCAATAGCCTCAACTTCTACTCTGAATTCCTTCTCAGCTTGCCCTCTGCAAGA
TCAAAACACATCATTTGATAAAGCTGAATTCAGTATAAAGCAGGATGTTCGGTTATGGAG
GAACATAGGGCAGTGTTAACAGGCAGGCCAAATTGTGATAAAGCAAGTCTTACAGGTTAT
TAAGAAGCTTTTTGACAGCAACAGGAGTGCCATTGACGATCTCGCCGCGATAAACTACAC
CATATCCACCCTCACCAATAATGTTATCCTTGGAAAAACGGTTAGTAGCAAGTTCCAAAT
CCCTCAAAGTAAACCAATGACCCCAGCCAAGGTAGGAGAACTCTGGCAAGCCAACCAAAG
GTGAAGGGGCAGTTATTCCATGAGTTGAACCTTGCCGAAAAGTTCCCGACCCTCCTTCTT
CAGCTGATTGAAAGCCTGCATCCTTGTCCATGCAACGAAATGACCCTGAGTGGCTCTCGT
CCCCACGTCTCGATTTGCTTACACCCAAATGGACCATGACCTTGTCTGATTCCCGGTCAC
TAGGCTTGTCTTGGATCGTTAGCAGGACTCCATCATGCGCCCCAAAGTCACTTGCCGGGA
CTTGCTCCACCCTCACTTCCTTGATTTCCTTGGAAATGGCAGGGATTTGGGTGATTGGGA
TATTTGCAGATGCTAGTCTGGTCCTCTTCCTACTCCGCATAGTGAGCCAGACAGTAAAAA
AGAAGACGACAACCATGAACACTCCCAAGGCAACACATACAACCTCCCATACTTTGAGAT
GCAAGGGGCCAGTCAGCCGGGAGAGATGATCTTGCAGAGTAGGGGAGGACGAAGGCGCCT
CCATAATGGACTAGGAGTGTCCTGATCCTATCCTACATACAAGCAAAACTGTTAGGTACC
CATACATATTGCACAGCTCCACAGATCAGACATTGCAGCTAACTCTTCGTCCACGGTACA
AGCGCATAATAAGGAGACGGATTCCCGGAATAAACTGCGGTAATTAAGACATGATTTGGG
CTGAAAGGGAATCAAGGACAAGGTGTTACTCTGAGGCTGAACAAGGGGAATAAATTCCCG
CGATGGTGACTGCTCGCAGTACCGAGACATACACACAGAGATCGACAGCTAGCGCATTTA
ATTTCCCTTTATGTTTTAAGCCGTGGAGAAAGTGGAGGTGGATCATGGCGTGCGGGCGTT
TTACACGTGAACTACAGCAAGCTACTCTAGCACCGAGTAGAGTACTAAGAAGGTGTTTGG
ATTAGAGAGTGGTAACGTAAGTGGTAAGGGAAATAGATCATGCTGGTAACGGAGACATAA
GGGATAAATCCTGGTTTTGTTTGGTTCATGCCTGTAAAGGAATCTGCTTAAACTGTCTGC
TTCGGGGTTGTTGCGGCCGCTGGCTGGAAAAGGAGAGCAGACAAGGAGAGGACGAAAGAT
TGAGGACAGAAAGGAGGGAGGAGGGAGGCACACTGTACCTTGCAGCGAAAGGTCCGGCGA
CGACGGCGAGCTGGGGCGGCAACGAGTGCTCCGGCGGCGAAGGCGAGATGGGGCGGCAAA
GAACGGGGTGGCGACCAGGGGCACTCGAAACTCAGAAGCCGTAGATGAGGTGCAGGTCCT
GCCCGCCGGCAGGCGTGCCGCAGATGCGGCGGCGCCGGACGAGGAGGAGAAGGTCAAGGG
GAGGCGGAGGGGGACTCGAAGGGGGCCAGGGAGGCGGCGGGCGCTGGTTGAGGAGGGGAT
CGTGTGAGGAGGCAGGAGATTACAGCGTATAGTACCAAATCGTGTGTGTCGCTTTCTGTT
TACGCCGTAATAAAAGGTACCGGACATTTCTCCCTGAAACAACACCTCCTAGTGGTGATG
AAGCAGCTAGTCAAGGTTGGAGAAACTTTCACATCTTGTCGATGTGGGCAATGGAATGGA
GGAAAGAAAGTTGCTTTGTTTTTCACTTCTTTTCTAGCTCGATTTCTATATTACAAAGAA
AGAATGATGATAGTTCTATCAAGAATTTTTGAAATAATTGTAGCATTTTTTTTCCTTCTT
TCGAAAATTCAACCAACCATGAAAACATTTGGCCAACAAACTCAAAAGGGCAAGAAGAGA
GCCCGAGATCCAAAACAAGAATCGCTAAAAAGCGCATTAAATAGAGGTGCATTGCAACAG
CAACCGGCATACAAAGAAGGAACAAAAAGAGTCCACCTGAGAGATCTTTAGATCTCCGCG
TCCGCCTCTTGGGCAAATTAAACCCCAATGCGCAAGCAAGACATTGAAAGATGGATCAGC
CAGAGTAGCAGGAGCAGATCACCCAACCGAGGAAAAAGTAGGGGACCTGAATCCCGGCAA
GCTTAAGACCAAGAGCGGCTTTATTCCTCGAGATTTTGGAAAGGGGGCGAGGAAAGAGGA
CTGAATAAAGGTTGGTAAGTGGTATGTTTGGAGCATTTTGCGTATTTGCTTTGCTCTTGC
GTTTTTCTTTTGTGTTTCTCTCAAGAAAATCAAATGGTGGTGAAATGAGTTGCCCTTTAA
GGCCTCGTGGATGGGAGGTGATAGAACCAACAGTTGCTCCACTATCTTTTCCGCTCGTTT
TGTCCCTTGTTTTACCTAGAAATAGTAGTGTTTATCGTTCAGATTGTTGAATTAGAGGTG
TTAAAATAGGGAATCGTTAGGGATCAGATTATTGATCCCTTGCTTCCTGTCAGAACAGTG
GACGGTCGTAGGATCTATTTCACAGAAAGCATACGATTTGTCATCCTGTAAATTAGTTTC
CATGCATGATTCTAGAGTAATTATGATTGGTTTGCTTCCTAACAACTACTCACATAAATC
AAGGCCATAACTATGTTTCCACTTCAGGTTGTTTGTTTCCTTGGGAAGGAATTTTGGATT
CCGTTATTATTTATTTTTGCTTTCAAAGTGAGCTTTGTGTGACTTTCCATTCCTATTTAT
ATTTGCTTCTAAATGAGTCTTCTCTAATTTTGCTTCGACACTATAGACAAGAAAAATTCC
AATGTGTGGAATTATATCGGCTTTCGACTATCAATGAATTTGCTTCCATGATGAATTAAA
CTTGTTACTGTTAAATGAATTTTCTATGTAATGATTTTTCATTTCCATCGACTAGAGAAA
TGCTTGTAGCCAATTAAGACATTCTTTTTGTAAAAAGACATTCGAGTACACGTAACAGAT
GCTTCAAGCATATTAGGGATGTGATTCCAAGAAATATAAATGTGCTCAATTTTCTTTCAT
CATATGAAAAGCATGCTTCCAACACTATAACCATGCTTCATAATCGAGTCATTTTTCTCT
CCAAGTAGTGTAATATGGTGTCCTTACTTTATTTTCTAGGTATGCTTCCATGTGTTATGC
TCTTGCGGCCTTTTTGGTTTACTAGAAAATTTTGTTGATTTGTACAAAGCATATACACTT
CTTGTCTATATGTCACACACCTGCTTCGGTCTTGTCCCAGTCACTCCCCACTCTTCTCCA
TCCACCGTATCTGACCTAGCCTCGATGATCTCCTTTTATCACACAAATTTGTGGGTGTCG
ACGTGGACGAACCGCACCGGAAGGTGTAACAAGGCTAGCACCAATGAGGGGACAATGCTC
TTGAGCTTATGAAACTGAATGTGCATCTTGCTAGTGTGCTTGAAAACTAATGACCAGAAC
ACATGGCACTGAGATACTCAATATCACGCCGCACGCCATGCCCACCATCGACGATTGCGT
CATACTCACCAACAATGAAGCATGATCTTCGACTCTCGTGAGCCCTGCGAAAATTTAGGA
AGCATGATGTGACAGTCCGGGACCGACGCCCTAGAAGATTCCCCCTTCTTTTTGTTTTCG
TCGTGTGTCTATTTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCA
TCGGCATCTCCGTTGGCGCCCGTTTTCAAAACTTGCATCCG