Map Locations of contig_137436 (9624 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_137436

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6366 2 2859 bp MLOC_6366.1 Available Available LOC_Os02g42040.1, FRAME:+1, EVALUE:0.0, 13102.m04647 protein MIF4G domain containing protein, putative, expressed





CDS Structure of MLOC_6366






Contig Sequence (9624 bp)

>contig_137436 9624 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCCTTTTACTGCCAGGACTTGTGCTAATTAACCTTCTATCCTGGT
GTTACTATATTCGGTAATTTCCTTTTTGAGGTAGACGAATGGTACATTTGCATGATAGCT
GTTATATTTTTTCTATGCCATTGCACCTGACCCCACTTTATTTATCTCCATAAAGCATCT
GACCAATCTGTGGCAAATATTCTAATTTTTTTAGGAGCCTAAATTGGAACAAGGAACTGA
AGTTCAAAACAATGCTGAAACTTCTGTCCCTGAGCACCAATTGGAAGGACAAACAAATGT
TGGATCTAAGAATAGAGAAAACAAAGATAAAACAGGCAAAGAAATCTCTAAAGAAAAAGA
CGCTGATCAAAAAGGAGATACTGAAAGAGAAAAAGCAAGAGTCACAGATGGCGCAAGTTT
GGACAGCCTGCTACAGAGGCTGCCAAGATGTGTGAGCCGAGATCTAATTGACCAGTTAAC
GGTAATAACAACTGCATTACTTACTTCTGTGCATTAGAGATGGTTTCACCTTATTCTTGA
ACTCCATTTATTTATTCTTTCAGGTGGAGTTTTGCTATCTAAATTCTAAAGCAAACAGGA
AAAAACTTGCACGGGTTTTATTCAATGTTCCAAGGACTTCGTTGGAACTGTTACCGTACT
ATTCACGTTTAGTTGCCACTTTGTCCACATGCATGAAGGATCTCCCAAGTATGCTCTTGT
CAATGCTTGAAGAAGAGTTTAACTTTTTGATGAATAAGAAGGTTTGTCTCGTATTCATTT
ATTTCTTGGTCCTTGTTGTCCATAATACACTGTTTTATTTGGTGCTTGTAAGAAAAAATG
TCTTTTGGTTCTTTCAAATTTTGTACCGCTCCATTATTCTTGGTGACATATGTGATTCAA
ATTTAGTATAACTAACAGGGTTATCTACTTTGCAGCACTAATTATTCTTTGTTATATTCC
CTCTTTCAGGATCAGATCAAAATCGAAACAAAAATTAGAAATATTAGATTTATTGGGGAG
TTGTGCAAATTCAATATTGCTCCATCAAGCCTTGTTTTTAGTTGTTTGAAGGTATGCAAA
TCTACAAATAAATCCAGTTAGAGAATTAGTGCCTTCCTGTTTATTATGCTTCTGTTGTGT
TTCTAAATTTCTTGTGCTCTTGTTTAACTACCTTTTAGATGGTACATAATAGTTCTGTTC
TACGTGGAATAATAATTAGTGCCCTAAATGTGGTAGGCAGTATAATGGCTAACTATATAG
ACTGGGAAACTTAGTTAGCTATGTATGTCCCAAATCACTGATACAAGTGGAATGTCATGT
TGTGATCACGTGGGTGATTTCTGACCACAATACATGGATAGGCGTGGCATTTCCTGCAGA
GGAAAGTTTCAGACCACACTATCGATTTTGTCTTTCTCCGATAAGGTCTTCTCGTCTGTC
TGTTTTCTTTTGGTAAGGCTATATGACTATCCCATCTTTTCACTTCTGTAATTCTGTTGC
AAGCTAGCCGGGAGCTTGTGCTCAGCTGATAACTATTAGACCTTTTCTGTGCGTGAGGCC
CAGGCTGCATGCTCATGTGTGCAGTGTGCTTATTAGACTTTTATCCTTTTAAGTTGTCAA
AGGATTACACCCTACTCAATTGTGCAAAGCCTATCACTTGAGAAGGACTGGAGATACCCA
GGGCATTGAAGGGTTTTTGCGGAGTGTGCTCCTTCATTGTTCTTATTTAAATTGACAAGT
CGAAGGTGCTGTGACCTGGCTGAGTCGCCACTATGCCGAATGATGACTATGTCAAATGTG
GCCCTCTCCCCTGTCCGGTTGCCCCTTCACATCTTTATCTGGTATAGATGCACAGCTGGC
TGCTGCTATGCTGAATGCCACCTTTGACGAATGACCCAACCTTATTATCTCTTTTTTAAA
GTTGATGGGCTGAAGGTGCCATGATCCTACATGTCTGATAGCCGAAGCGACGTTGCATGC
CCCTCACCTCATGATCTCCATTTAGAAGTTTGCAGTTACATGACCTGCATGTTTGCAACC
TAAAAAGCACGGATACAGGGACACGGACACGGCGACACGGATACGGGGACACGGGATATG
GCATTTTCCAAAAACAGCCCATCGTGGACACGCCAAGTATATATATAAATAAATAAATAA
TGCCATGTAATATAGAGTTAAAGACGAAAAAATAACAAGGAAGAGATCGCCCCATTCAGC
CGTAACTCTCTGAATATAAGCCCAGAGAATATTAGTAGTTGGGCCGGCCCAGCTAGTGCA
TGCCACAGATCAATCTGCACCGTCAAAACTCAAGCCCTATCTCTCTCTACCCTAATGCTT
TGACCAAGCCGCCACTCTCTTGCCATCGCCCCTCCTCCCAGTGATGGATCTCTCAACTCC
CCCGCAGCACCTCTCGCCACCACCCTCCTCCCAGTGTGCTCCTCTTGCCGCTGCAGCAGC
AGCAGCAACGGCGGCAGCGAAGCGCAGCAGCAGCAGCAATGGTGGCAGCGAAGCGCAGCA
ACAGCACGGCGGCAGGAGGGTGCTCCAGATCCAGCGCTGCCTGAAGTCTGAGGAGGGTGC
TGCTCGGACCAGTGGATTAATCGAGCCCCTCACGTGTCCCCTACGTGTCCCAGCCGTGTC
CTCCCTTCTCTTTTCTTTTTTTAATTCGTAATTCGGGAAATACGGCGGGATACGCGTATC
CCTGCGTGTCCGAGCGTATCCCCGTGTCCGTCCATATCAGTACGGGGATTCGGCAACTTC
TGCCGTGTCCATGCTTTGTAGCTTGCAACACCACACAATCAATCAGTTTGTAACTGCCAA
CTTAATTTAGTCATTGTGATCATCTGTATTTTCAGGCTTGCTTAGATGATTTCAGCCATC
ATAACATTGATGTGGCCTGCAATCTTCTTGAGACCTGTGGGCGCTTTCTTTATCTCTCAC
AAGGAACTACAGTTCGCATGGCAAACATGCTGGAAATACTGAAGAGATTGAAAAATGTGA
AGAATTTGGATCCACACCACAGCACACTTGTAGAGAACGCCTATTACTTATGCAAACCAC
CAGAAAGATCTGCCAGAGTCTCTAAAGTCAGGCCACCTTTGCATCAGGCAAGTCTTTTTA
TCCTGTTCTGTTCTCTTTTCTTTCTGGTATTTTCTGAGTTATGTGTACATACATTGTTAC
ATTGAGGAACTAATATTGTCTATCTATGCATGCAGTACATAAGGAAGCTACTTTTCTCAG
ATCTTGATAAAACAAGTGTTCAACACGTTCTTCGTCAGTTACGCAAGTTACCTTGGGCTG
AGTGTGAGCAGTACCTGGTGAAGTGTTTTCTCAAGGTTCACAAGGGAAAATATAGCCAAG
TTCATCTGATTGCTCTTCTAACTGCTGGTCTTAGTCACTATCATGACGATTTTCATGTGG
CTGTGGTAGATGAGGTGAGTTACCTTGTTGAAACAGATGGTTTGGAATAACTTTGGCTGA
GACGGTAAACCATTGCATGAGAAGTCAGTAGCAGAAATTGTTTCACACTTCACATAAAAA
TATTATATATGGCATGTAAAGTTGTACCATGAAGGCATGAATAGTGGACCAGTTTTCCAA
CCTATCATGTGCAAATGTCTATCCCTATTCTCTTTACATTCTCTGCTTTTGGTGCTCAAC
TTTGTTTCTTCTTTCTTCCATCTGAGCTCTGACTTTCCTTAAAAAAAATGCTTAGCAAGT
GTATTCCATATATTCGTATATTTTTGCATTTGAGATCTATTGTGTCTTTTAGTTGAGATT
ACTAGCATGTTGTTATTTGCAGAGTATTATAAAGATCTTGTATATGCATATGTAACAGTA
ACATAGTAATATCAAGGAACAGAGTTTACACTTAGATTATAAAAGGATTAACTGATGTAG
TGGTTGCCTTGTATTTGGATTCAGGTTCTAGAAGAGATTAGAGTTGGACTTGAGCTGAAT
GACTATGCAATGCAGCAGCGACAACTTGCCCACATGCGATTCCTTGGGGAGCTATATAAC
TACGAGCATATTGATTCGTCAGTTATATTTGAGACAATGTACCTTATTATTGTATTTGGT
CATGGAACACCGGAAGTGAGTAAACATATCCAAACTTATAAGCTATCTTTACTTTGTTTT
CTTTATATTGATATTTCAGCAATCCATTTTATGGCTTGTACAGTGCAAGGTGTTTCTGAT
TTATTATATTTTAAAGAAACACACACTTTTATAAATATGATAACGTCTTGATAAACAACA
TTTCACCGTGTCATTCTTCAGCTTATTTTTTATTCTTAAATTCATTGTTTAACGTGCTTG
GTATGCATACTTTTTCATTCGAACTGTATGTTTGCATCTCTTTTCTGTGATCCTGGGTAA
GTTATGTTGCAAACGTAAAAAGTTATTAAACATGATTCTCATTCTCTGTCTCTAATGCCT
TACACATGCTTAATCACCTATTTTTAAAAGAATCAATATAATTTGTCACATCAGTGAATT
TATCCTTGGATTTATCCTGTGCAGCAAGATCTGCTTGATCCCCCAGAAGATTTCTTCAGG
ATAAGGATGATTGTTACACTTCTCCAGACGTGTGGTCACTACTTTGATAGAGGCTCTTCA
AAAAGAAAGCTTGACAGATTTTTGCTACATTTTCAAAGATATATTCTGAACAAAGGGCCG
TTGCCACTTGATGTTGAGTTTGATGTTCAGGTTAGTGTTGTTCTAAACGCCAGCAACTTA
CTAGAGTTTGCATCTTTAAAGCATAAATGCATGTCGATTCTTCATTATATATGTAAGCAT
TTGGTTATGATACAATGTAAGTGGAGAAGAACTGTTCTGATACATCAAGTTGAATGACTG
GTGCAAGGTGAGCCAGTATACCTCTGCTTGTTTTGCCTCTTTCTCGATATCATAGCTATC
AGGCTGTGACTTGAGAGAAAGAAATTATCTGGATATACTCCCCTCCGTTCCTAAATATAA
GTCTTTTTAAAGATCCCACTAGAGACTACATATGGAGCAAAATGAGTGAACCTAGACTCT
AAAGTATGTCTATATACACCCATATGTAGTCTGTAGTGGAACCTATAAAAAGACTTATAT
TTAGGCACGGATGGAGAGTAGTTGGTAGTGACATTTCAACATTTTGATCTGCAATGTTGG
GTGTGTTGGCTTCAAACTTAGTATGGAAGCAAGGGGTACTATGTGCTTAGTTGTTTACTT
CCGTGTTGAACTGCTTTAATTTGCTTAGCAAATTGTGCAGTATTCAAATTGCATGCTACT
CCCTCCGTTCCTAAANNNNNNNNNTTTTAGAGATTGTACTATAAACTATATACGGATGTA
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTATGTAGTCTTCTAGTGG
AATCCCTAAAAGGTCTTATATTTTGGAACGGAGGGAGTATATGTGATTATCCTTCTTAAT
AGATTTAGAGATGTCTCTAAAGTGAGCATGGCTCCTAATTTACTTATTTTTCAAGAGATG
TCTCTAAAGTGAGTATAGCTCCTAACTTACTTATTTTACAACTGGTGCAGGACATGTTTG
CTGAGCTACGGCCTAACATGACTAGGTATTCATCTGCAGAACTATTGGCTTCTGCTCTGG
TTGAGCTTGAAGAAAATGAGAAGGCGAAACAATCCGAAAGTGCTGCTTCTGATGCCAGCT
GCAAGAGCTCAACAAACAGACCTGACAAAAATGGCAGGGATCACGAAGAAGTAGCAGACA
GTGAAAGCTATTCAGGCAGCAGAAGCATCTATCGCGATGGAAGCGAAGATGGAGATTCTC
TGTACGAAGAAAACTCAGATGACAGGTCTGGGAATGGAGTTGATGATGACATGCCTGCTT
CTTCTGATGAAGAAGAAAGGGTCCAGGTTAGACATAAGCTGGTGCAAGTTGACCCTAAGG
AGCAAGAAGACTTTGATCGGGAGCTGAAGGCCCTTCTACAGGAAAGCTTGGAGTCGCGTA
AGTTGGAGCCACGGGTGAAATCCACTTTGAATATGACTGTACCGATGAAGATCGTTGAGG
GGTCAAAGGACTGGAGAGCCACCGAGACAGAGAGTGGAGAAGAGCTTGCTGCTGAGGAAA
GTGGTAATGCTGGGGTCGGTAGTGAGGTCAAGGTGTGCGTCAGGGTGCTTGTGAAGAAAG
GGCACAAGCAGCAGACAAGGCAAATGCTCATTCCCGGGGACTGCTCACTTGTTCAGAGCA
CAAAGCAGCAAGAGGCAGCTCTGCTTGAGGAGAGGCAAAACATCAAGCAGAAAATCCTTG
AATACAACGAGAGGGAGGAGGAAGAATTCAACGCATCATCATTGCAAGCTGGGTTCTGGG
GTCAAGGAGGAAGCAGCGCAGGTGGCAGTATCATCGGCTCGGGCGGGCGTGGTTCCTGGG
ACGGTTCGAACAGAGGCGGACGGGGCGGTCGGCAGCGGTACTACATCGCCGGCGGGATCT
ACCATGGTTATGGCAGGGGAAGGTGACCGTCTGCCGCCTTGTGGTGCTAAGTAAAATCAC
GGTTTAATTCAACCGCTGCCTTGCGAAATGGAAACCCAAGTGACGAACAACATGACGTAA
TTTTGGAAGTGGCCTGGGTGCTGTACTCCGCTGGGCTAATAGCCCCCATGTTTACAGTCA
CGTGTAAAGTGGGTTTGGTCACCGGTAACTGGTTTAGGAGGGTATGTTTTTTTTTCTTCT
CAACTGGTTTAGGCGGTTTCTCTTGTACATAAGATGTTCTCACTCGTTACCCCAGATGAA
GAATAGCTTCCTCGAGTTCGCAAAAAGGTCTGGATCCGCAAACGGTAGAACCTGAGCACG
AGGATGGTAGCCCACTCCATGTCTCCATCTACTGCTACTCGCATACCTTTTGCCACTGCA
TTTTCACTCGTTTGAGCTGTTCCCGTCGTCGTTGCCTCATAATTTTCTGGCTGGACCACA
GCCTTCCCCCGTTGTCCGCTCCATGATTAAGGCCCTGACCCAGCACGCGTTTGTGTATAT
CTGCCATGAGCATCCATCCAGCTTTCCACCCAACGGGCACGAGGGGGAGGGCGCACAGCA
GGCACGAGCCTCGCTCGGCCGATGCCCAATGGCTTCCCGCGGCAGTGCTCGTGCCAAGGC
CACCACCACTAGCTATGGCTCGCCCGACCGACGTTGCGTCAAACGGCTGTGCAGCCACAG
GGAAGCGCATCTCGCATACGAATCCATCATCCTCCATGGCCACGGAGCGGAATGAATCCC
CTCCTCCCTCGGGCCACAGTAGAGATAGAATCCATATCTTTACTCCTCCTTTTACGCTGG
ATATGGGCATCCATCACAGTACGGCCACCGCTCCCCCGCACAGTTACACGCCCGTAGTAG
CATGTGGAGGCGGATCCATGCAATGCAATGCAAGTAAAGAGCATATGTGCGCGAGTGACT
CATCGGGCAGGCATGTAACCCGGCCGGCATTGGCGAGCAGGGCGCGGGTCAGCCGGGGCC
ATCCATAGTTGCGGGAGCACTAGGGAGGGAGAAATAGTATCCGGGCCCGGCCGGCCTTTG
CAAGGAATCTCGGGGTGGAGTGGATTCTGTCACCGTGTCACACGCCCTTTCTTCCTTGCT
TTCTTCCTTGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCCAAGGAATCTG
ATGTGCGTCGTCCCTGTGCCCCTGTGCCGCTGTGCGGGGGGGTGGAGCCTGGCTTTTCGA
GGGTTTTGACTCTTGGGCTGGGCTGGGATGGGAGGGACGGGATCTCTGTGCGTGCGAGAG
AGAGCGGCGTGAAGCTAGATTCTGCGTCGCGTTGCCACCCAAGTTGGTTACCTCTTTTAG
CGTGGCCGCGAATAAACTGAGTGCTTCCGCCTACCAGCTTTAGGCCCCTCCCTCCTCTGC
TGCTCTCCCTCTCTTTTCACTACTCCTTGTTGTTTGTTCCTCTTGATCCTAGTTGGATAA
AGCCGCCACGTCCACGTCCGTGCGCTTAGATAAATATCTGACCCTCCCCTTCTCCCGCTC
CATCTCGTCTCAGGTGGCCTTTGATGTGGAAAAGCAGCGCAAATGCGCGGCTACATTGCG
TTTACGAGTGCTTTGCTCTGTGTGCAAGTGCATATCTTCTTTTCTTCCCGACTTGACTCG
TCGCCCGTTCCAGAGATCGTCTCTCTCTCTCTCTCCCCGCTGCCCAGTTCGGTGAGACGG
GTGACAGCGATCGACCACTGCAAAAAAAAAGAGGCTTTACATTGCACGTCCGTTTTGCGA
ACCACATCTGACAACTTGTGTATGCTGCCAAAATAGAGTGGAAACCAAAAAGGATCTATA
TGGAGTAATTTTTTTTTTTTGCGGGAAAGGATGTATTGTTGTCACCTAAAGCACGCAGCA
CCAAGTATTTTACCCACGGAATGGGCGCACCTGTGCACGTGAAAGAGCAAAACCATACAT
GCCACCATATATGCGCGGTGGTGTGATGGGTTGTCAAAGGGGCGTTGGGGCCAGGCTCCG
AGGGACCACCCTAAACAATTTGTCCTGCCAACGCCTATCGCTGCCGTGTGTTGTGCTGCC
TCGTCAGTGACCACCGGCCGGGGAATCCATCGCGATTCAGTATGCGCATCTAGAGTACAT
TTCATGAGATTTTCGCATCATGTGAGTAGATGGAGTAGAATCTTAGGTGGGATGAGAAAT
TTGTCATGTACACCTTTAGGACGCTCTCACATGAGAATTTCAGTCTTTGCCATTTTTTTT
CCCTGCCAGAATCGTTGCCATCAATTCACTAATAAAGGTAATTCGGATTGAAAATGACCA
ATGGAGGCTGTGCTCCATGGAGCTTGGTTTCAAAATATCATTTTTGTAATGTGATTTTTT
AGATAAGTTATGGACATACATTACTGGAAGAAAGCTTAGTAGTAGTGTTGGTTTTATCCT
TATCAGTAGCGCTACCGCTAACGCGCTACAGCTAACCTGTTAGCAGTAGCGCTGGAATTC
CAGCATTACTGGTACTTACGTTAGCAGTAACGCTGGAGTAAATAAAGCGTTGTTGCTAAG
CCAACGCTATCGCTAATATTCCAACGCTACTGCTAATATTCCTGCTTTTAATATTTAATT
CCCGTCGTATTTATGCCCATTCTACGTATTTGTGCATGCTCTATAGAGTAGTTTCATCAT
TATCATAATAAACATACATTATTCTCATCATATCATACACATAAAATAGTCTCGTCATTT
ATGCCATCATCATCATTACCCAACACAAATATCATCAAATCTCGAAAATAGCGATACACA
CAAGTCATGGCACACCCACAAGTTTTATCATCCACATCTAAACCATGATATAGAAGAGAA
GAGAACATGAGCAATAGCGCGACTATGTAGTACTTCTTGAGGCACCGGTTTTGCTCCGTC
TCTTGCCGTAGCATCCACCTCAAGTAACTCTTTTACGCTTTAGTTCTGTTGTCGAACCCT
GTGTGGCTAACGCCCGGGTACCTGTCCACCTAGGCCTGAGCGTCTGGCGAGTGGTCGTAC
ACTCTTGGAACCCTTCCAATGAATACGATGTAGCAGTCCTTCGTCATCTTCGATCTATGT
ACCTGCATCGTAAGTTGATGGATT