| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_137425
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_6358 |
2 |
3170 bp |
None |
Available |
Available |
LOC_Os01g46169.3, FRAME:+2, EVALUE:1e-43, 13101.m04743 protein GDSL-like lipase/acylhydrolase, putative, expressed |
CDS Structure of MLOC_6358
Contig Sequence (6013 bp)
>contig_137425 6013 assembly3_WGSMorex_rbca.fasta
TATGTTACTCTAATCCTCTCTCTCTTCTTTAATTACTTGTCACATCATCATGTTTGCTAG
TCTCAAGACTATGTTACTAGCTATGATACCCCCACTATGACCAGCCTAAAGTGGCAGTTC
GACTTTTTGGCACGAGCTCACATGAGTCCGATTTAAAAACAAAACCTATTTTTCCCGCCC
AGTGTGATAAAGTGGAAGACCATGTGCACCTGTTTCGTATCTGGTCGCCTCGTGTTCGGC
TTTGAATCTCATCTCATATAAACAATTTATAGGAACGAGCGAAGCGTGGGGTTCTTTATC
ATGTGGTGCTCATTCTCCATCCTGTTCTCATATAACAAATGGATGATGTTCCTCCCTAAA
AAAGAAAATATAGAAAATGGATGATGATCCCTCAAAAAACCACTCCACGGATGACGCATA
AGCCATTGACTTTAGCCAGGCCTTATCCACCGTCTTAGGAGCATCTACAACCGGACCTTA
AAAATCCAGCCCCTCAAACACCCGTTGACATGTTCGGACGTGTCGCACACACTCACCAAT
CACGTCTCACATTTCTCTCTTCACATCTCGTATCTTATATCCGACGCTCTATAATCATAT
TACACATGCACGTCAAAATAATTTACGTGATCAAATATCAAACAATAAAATCAGAAGCAA
ACGAGCACAAGATTTACGACAAACGGACATCCATCATCACCTAAAAGATCATCGAATTCG
CAAGACATGGTTCATCATCACCAAAAAACTATATTAACAATGCGTAGGGAGGACTGGGCA
GATCACCACTTCCTCGTCGGACCTTTGCCATTTGCCTTTTGGATCGCCGGCACAAATGTA
CATGTCCACAGCTGGCGGAAGGTCTTGATCGTTGGAGGATGAGCTACCGTTGTCGTTGTT
GTCGGAGTCTTTGTTGGAGAGGACGATGAGGCCCTTCATCCGTTGGATCGCCCTGTCATG
CTCCCGCTTCAACCGCGCCACTCGGTCCTTCTCCTCCGTTGCCTCCTTCACCTCGTGCTT
CGACTGCTCAATAGCTAGCCGGAGCGCCTTCACATTCTTTCATCGGAGGTGCCGAGCGTC
CGCCTCCGCCATCGTGATGGACTGGCGGTACACCCATGCGAGAACGTGTTCTTCCTCGTC
GGGCTCCGCCGGCATCCAGCGGTGGCGGCACGCGGACTACTCCGCTTCCCCTCGTCTTAG
TGCCTGCTGCCTCTCACGGTGGGCGGCGTATGCCTCCGATTCCGGAGTGCGCGTGCGGGC
GCTGGCCGGCGATGCAGGCGCTGGCCGGCGATGCGGGCACTAGGACCCAACGCTGCCCAC
GTGGAGCAATGGCCGGTGGGAGGAGGACATCGTGTGGGGCCGATGCGGACTCTGCAGCCC
TATCGGAGCTGCGCGCGGGACGGGAGGGTCCAGCTTCGGCATCCGTGCTCCGCTGTCTCG
GGAGCGGCGGGGCTCCAAGGCGATGCGGAGGGCCAGTTTGTCGGAGTCGACGTCGGAGTC
ATCGGAGCGGCTGCCGGCACTCGACATTCTACTCGATGGGATCGGGTTCGAAGAGGTAGA
GAAGGAGACGAAGGAAGAGAATGAGCTAGGGTTCGAAGCAAGGCGCCTGGAGTGGGTTTT
TTTTAGACAATGGTGCAGTCGGTGATAGGTCAGGCCTATCAAGCAGTAGTGCGAGGGCCA
TCCTATATACGTACTATATTTAGGCTGGATACGGTCGGTCGGAAAAGGTCTGGTTAAATC
TTTTTTGTAACCCATCACTGACGGATACGAGGGGTGCTCTAATCGCAAATCATTTGAGGC
ACACTGATAATTTTCAGCGCTGTCCGTGTCATCTGTGGGTGGCCTATCAAGATCACAGAT
GGCCCCGCGAAAGTGAGTTTGGTTGGTAAAAACGTCGCGTCCTCTTCTTTCCTTCTTTCC
TTGCGCCCCCGTAGATCCATTCTCCTTCCACAACTCCTACATTTCCACGGGCCACGGGGA
GAAAAAGAAGTTATGCCTTCCTCTGCCTCCGTGACGGTGATCATGGCGGCGGCGTTCCTG
CTACTGGCGGCGGCGCAGGCGCGGGCGGATCCGGCGTGCTATCCGCGGGTGTTCAGCTTC
GGAGACTCGCTGGCGGACACGGGAAACGTGCTCTACCTCTACGGCAACGACTCCTACGAG
GCCGCGACCAGGCTGCCCTATGGCGAGACCTACTTCCACAAAGCCACCGGCCGATCCTCC
AACGGCCGCCTCATCATCGACTTCATCGGTACGGCACGACCACACGGCTCGCTGGATCCA
TCAACCAGCCAGCTTGGTAGCAAGAGTATGCATACTAACTTGAAATCTGTGTGGGCAGCG
GAGGCGCTGGGGCTGCCATTCGTGCCACCGTACCTGAGCGGGCGGAGCGCGGAGGACTTC
GTCGGCGGGGCTAACTTCGCCGTGGCCGGCGCCACGGCGCTGAGCCCGGACTTCTTCTGG
GAGAATGGAGTGCCCGCGTTTCGGGCAGACACGGTGCACCTTGACATGGAGATGGAGTGG
TTCCGCGACCTCCTCGGCCTGCTCTGCCCCAACGACGTCGCTGGTATGCTAGTTCAACCC
CCTTCTCTTTTCCGTTTTGACATGGACTTACAGGATCTTGATCCACCACTTACAAATTCG
GCACTCAAACGGCCGTAAACGCACCCGATTAGCGACCGAACCTGTCCTGTGTTTGTCTGT
CTGTACATTTACATTTTTTATTTTTATTTTCTTATATGTCCGATCATTTGCACATGATTG
ATGAAAAAAGAAATGGTCTAGGATGGGGTGGTGTCCTGTATGGCGGACCGAGACGCATTC
GCGTCCGCAAACCTTCAAATTTTTTTTATATTTGAGATGAATATACAGGTTCGCGGACAG
CCAGACGTATAGGGATAATATGAGGAGTCCGATTGGGTCACTTTTTTCTTCTCTCATGTG
GGTTATATGAGTGGTCATTTGAGGGACCGGTCCGGTCACTAAGAGCATCTACGGTCGGAC
TCCTCAAATGACCCCTCAAACGCGTTAATTTTTTTTCTGCGTGCAATGAAAAACGGCAAC
ATGGGTGTCGGCCAGCACGCGCTAAATCTCGCGTTGCGCTCTCAACCGCCCCATTCCTTT
TTGCATTTTATCCCCACGCTTTGCCGCCGTCACACTTCCTTCCCGCGCTTCGCCGCGCCT
TCTCCCCTGCCTTTCCCAGCACCTCGTCACTGTCGCGCCCGTCATGCCGTCGCGCCCCTG
GAGCAGCTCGGGCTACCGCAGCGTTCATGCCCGTCCGTTCTGCGTCTTATACGTGGAGAT
CTGCTTCGGCTATACGCGCCTCAGGCTCGGCACGTTCGAGACGGCCCACGAGGCCGTTCA
CGCTTACGACACGGCGGTGTGGCGCCCCGGGCAGCCTCGGGCGCAGATGAACTTCAACGA
TATCTTCACGCGCGAGCAGGCGCATGTAGTTGTGCCTTCCCCGCGTGTGGTTACCGAGGA
GGACCGCCGCGTCCAGCGCAACCGGGAGCGCCGCCTCATGATCGTCGAGAGGGACGAGGA
CGCCATGACGGAGTGGCCCGCGCGTTTCCTGGAGGATGTCGCTGCCAAGAACGAGTTCTA
GGAGCAGAGGGCACGGAGCGAATTACACGTCGCCAGGACAAGTGTAAGCGCAAAGCACTC
GCGATTTCCAGTTAAGCAACCCAGACACGAACCGGGACTCGAACAATCCTCGGTGGGAGG
ACGCGATTATTACGTCGTCGGACTACACCACCGAGGAGGAGGAGCAATCTAGGTATATAT
TTATTTTATTAGCATGTTTTATGAATTTCAATTTGCTTGCTAGTTTAAATTTGAATTTTA
ATGTTTGTTGATGAACTATTATTGTTGATTTTATTATTTTGTATATGTTTGACATGCGTG
CTATATCTTTACCGTGCATGTTGAAGCGCTACTGCGGCCGTTAAATTTTATAGCGTCTGG
AAAAGCTATCACACGCGTACGAAAACACTATTTCGGCGTCTTTTTATTTTTTGCATGTCG
CACATCCACACATCTGTTGAAGATGCTTTTAGGCCCAATTGCTTAATAATTTCAGTATCT
CTCCATTCTCTTTTTCTGCTTTGATCGCTTAAACTTAATGTTTTCATCCAAAAAGAGAAT
GTTTTCATATATATGCAACTCGATATAACATTTTTTGAAACTAACCAATGACCAAATAAT
GAAATAATTGAATATTAAGTTAACGAAAACAATGAAATGCACCTCGTAACGAAATAGGGA
AATGGTTCTAACAACCTGTCATATCTGAACAACAGTGGCAGAAAAAAATGTGCATCTAGA
TAATAATTAGTTCCCAAGAAGGTCGTTAGGAGAACAAAGGGCAACAAGTGGATGTATCCC
GTGTACCCAGACTTAAGGTGCAATCGGTGCACTAGATATAGAAAACACATGTTAGAATGT
TGCCAAACAATCTAAATATAAATTAGCAAATATGTATAACATTTATCTACAATGTCATGA
AATTTAAATTCAAATATGGGCCACTTCTTGAGCAACAGAAACAAAAGGTCGGCTACTAAC
GTTATTCATAACATGATTGACCTTTTTGTTTCATGAGTTTTGGACGGAATTTCAAATAGA
CATGATAATATGTTTTGTGTTTATCTGCCAAGTTATTTTCAGTAATTTTGGAAATCTCTA
ACGTGTGTTTTCCAAATCGGATACTCTGATTGCACAACAACAATGGTGCAGTGGATATGC
TTTCAGTGCAACACCTTGCTGATAAGGCAACAAAAAAAATCTAGAAACTGAGTTGTAAGT
TGTGGGTTAGAATCCAACACCTTGCGCAATACTAATTCTTCCTAAAAGAAACCACAAAAA
CATGCATGAATTTCCATGTACTCCCTACGTTTCTAAATATAAGTCTTTAAACAGGTTTCA
TTAGTGGACTACATACNNNNNNNNNNNNNNNNNNNNNNNAGTGTAGATTCACTCATTTTG
CTTCCTATGTAGACTGCTAATGAAATATCTTAAAAGACTTANNTTTAGGAACGGAGGGAG
TAAGATTTAACGGTTGCATGTAGACTAGGAAATAGTCATCAAATCGTTTACTTATAACTT
CATATATAGAGGGAAGAATTGTTTTGCTCTAACCTATAGTTCGTAACTTAGGGCAAAAGT
GGTGACAACATATTGAGGTTCTTAACTACGTTTTTACTGATCTACAAAAGGGAATTCTTG
CAAGAATGTTGCAAAGGTGGTGAAGGGACGTGAATGTCGTCTAGAAGGGGGAGGATAAAT
AGACGCTTTAAAATAATTACGGTTTAGTCTTGAAAAAATATGAAATAAAACTAACGTTTA
ATTAGCCAAGGACAAAATCTAAAAGAACTAGGCTCACTTATGTGCACAACTTATGCTAAG
CAAGATACAACTAAGTGATAGCAAGATATATAACAAAAAAACAATATGTCTATCATAAAG
TAAAGTGCATAAGTAAAGGGCTCGGGTAAGAGACAACGAGGCACGTCGAGACGAAGATGT
ATCCTAAAGTTCACACCGTTGCGGATGTTAATCTCCGTTTTGAACGGTGTGGAGGCACAT
TGCTTCTCAACAAGCCACTAGGGCCACCATAATCTCCCCACGCATTCGCACGATGCACGA
TGTCGTGATTCCACTAAGGACCCTTGAGGGTGGTCACCAAACCCGTACAAAAAAGGTTGG
GACAATCTCCACAACTTAATCGTAGGCTGTCAACAACACCTCGAAGCTTCACCACAATGG
ATTATGGCTTCGAGGTGACCTCAATTGTTCGGAGCAATCTCCGCAACCTAATTGGAGACC
CCAACGCTTGCCCGGGGCTTTACACCAGAATGATTTAGCTTCAAGGCACCACCAACCGTC
TAAGGCGCTAAAGCGCCCAAAAGACACAAACTCTAGGGTGCCCAAACACCCAAGAGTAAT
AAGGTTCTCAAACTTCACTTCCACGTATCACCATGGGGAACTCAAACTGATGCAACTAAT
GCAATGGAAAGAA
