Map Locations of contig_137387 (10350 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_137387

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6327 5 4039 bp MLOC_6327.3 Available Available LOC_Os07g42750.1, FRAME:-2, EVALUE:6e-121, 13107.m04478 protein DDT domain containing protein, putative, expressed





CDS Structure of MLOC_6327






Contig Sequence (10350 bp)

>contig_137387 10350 assembly3_WGSMorex_rbca.fasta
AACCTTTTTATATCCTCCTCAAAACGAGCATGTGACCGCCGACGAGGACGAGCGAGGGAC
GATGCGATGGGGATCAGAGGGGCGGCGCGGCAAGGTGCTCGTCGACAAGCAGCGAAGGGG
CAACACAAGGGGGTTCCCGCCTGCGCCAGGGAAAAGGAGACGGGGTGGCTGCAGAGTGTT
GCTTGCCATGATACTAATGTGCGCTTGTCCGCTTTTATGTCTACGCATTGAGCATTCACC
GTCCATGCGTGTCCGCTAGGCGGACCGGTGACCCAAACAGACGAAAAACAAGTCCATGCG
TGTCCGCTAGGCGGACCGATGATCCAAACAGATGAAAAACAACAAATAAAATCAGTATCC
GTTTGAGACTTTGGGTCACTGGGTTGGAGTTGCTCTTAGTGATTAGAAATAAAATATTGA
AGTGCCCTCACGGCAAACCCTTTGGGTATAAAGATAAAAATTATGCAACGCAAGAAATAC
CAATAGCAGTCAAGCTCTACACTGAAGCACAACGAGAATGCACAAAGTAGCCATGTTCTC
CTGCAACCAGAAGACCTACATAGCAAACTGGCAAAAAGATCTATATAAACCTTCTATTCC
ATGAAAATAGGTATTATGCTATCCAGTCAGGTGCCTCGCTGACCACTTCAAGTACAAAAA
GGAAATTACAACGCCGGAGCAATGATTATTAACAAAGAATTTCTAAGTGTTTACATTATT
GTACACACACCATCGACCATCCGACGGAGATGCCGTGGCTTCTGTAGAGTTCAAGATCAT
AACCTCAAAGCTGAAGGCATCAGGATGAAGGCAAAAAAAGGGCATCATGCTCGTCTCGCC
TCGAGAAAAAGCGCGGGCATCAATCAAAAGATTGGAACTGATGCAAAAATAAAAGAGTAG
TGGCAGCTGGAGCACCGCACAAAATAATCCATCTAGTCCCTTCCTAGCTATCTCAAGCAT
GTCTCTATGGACCCTTTGCCTAATCCTCTGCCAGAATCAGCTTGTGCCAAATGAGGTGCA
ATGAGGGCATCCAATTTGACAACCCAGAGTGCAACTGCAGACGTCGTTTGTGGCATCGTT
TGGAAGTATACAATAATGTCATCCAGATACGAACTAAAGCTTACTGCTGATGAACTTTGG
TACAACCAATCCTCATCAATTGCCCCAACAAAATCAACAAGAACCTGCAGGGAAGAAACA
TGGCAAAACAAAAGACAGTACATACTGTATAAATTACCTGAAACTGAATGGATGTTCTGA
TACTATGATGTAAACAGGAAAAAGATACTGACCTGCAAAAGCTCAGGTAATGATGATGTT
CGTCGCAGCCGCTTAACCCACAGGTTGTGCGAAGACTTCATCCACAAACCAGCAAAAGCT
GCCGTAGGCATGCGTGCCTACATCAGCGCACACAAAATGAGGGGAAAATACGATTAAGAA
GCTGCTATGAAATACATACACTATTTGTGACCAAACAAGTGACTGGCGATCCAATACAGA
AACATAACTCAACTTTGAGTCACCATGTATCATAGTTTCTTAGCGTAGATCCCAGACAAT
AAACTCTGCGTAGAACAACCATTTTCTAGTACTCACCTCAATAGCATGAATGGCTGCTTT
GAGTGCCTGTAGCTGCGAAGGAAGAACTTTATGATTTGGCACATCGTACAAATCCTCAGG
CTCCCTGCATGTTGCCACATGTATAGCATATCTTTCTTCAAGGTCAAAACCAACCTCAAA
AGTAGAGTGGCATATTCTGCAATGTCTTTCATCTCTCCAATACAGATCATGACAGCTTTC
ACAATGAACGAGTGATTCCTTAAATGATCTCTTGCCACACTTAACAGCAGTAAGGGAAGA
ATAGAAAGAAGTCCAGATCCATTTATCTAACGCCTGCAACCTTTCCCACTTTGACATCTT
CTCATCACTTCTCCTCCCAACTTCAATTCCTATTGCAGATGATGCATTTTGAAGATTACC
AGCTAGATATGTTGGAACAGAAGCACTGTCAATGTCTGATAGGGGTGAAGCTCCATCTCC
ACTACTTGGCTTGGGTGAATATCTGTTTCCACTGCTTGTCTCGGAACGAGAAGAATCAGA
TGATGCTGTGAGCGCAACTACACACCCATCTTCCAAGTGTTTTTTCATGCCTTCGAAAAG
ACATGATTGCCTCTTTTTCATTGATGCAAGAAGATGAGCTTCCCTGGTGCCTCTGATGTC
TAGGACAGACAATAGCGAGAGTAAATCCTGCAATGCAAACAAAAAAAGAGCCGGTAACTT
TATTTGTGGGAGTTTAACCTCAAGTGATTAAATAAGAGGCAAATTTAGATACTACGCAAA
TTAATCAGGTGGGCAACCTGTGGTGAATCTATCACTTCCCAGTGACCATCTTCTGAGGAC
TCAAAGTAAACCCTACGGTGACCTGGATCATCTGCTCTACAAGGGCCAAGGAAGAGCCAG
TAATTGTTGTATCTGCGATCTGATCCTAAGAGAACAATTTGTGGCTGATGTGCAAATCTT
GTGGGTGATTCGTTAGCTCCAGAGTCGGCAATGTAATCCTGACCCCTCAGGCTTCCTGAT
TGTCCTTGCATAGAAGAATCAAAACTGTGCGAGCTTCCTGGTCTATTTAAGTACTCATCA
CTAGATTGATAAATGGTTCTTGTAGACTTCTTTATCTTCCCACCTGAGGCATGTGACTGT
GCTCTCTGTATGTTAGACAGGACACTTTGTGGTTCCTATGAAAGGTAGAAAACAATAATA
TAAGATTCTGCAGCTTTCCAACAGGGAATACAAATAGAGAATAGAACATTTGTATGAAGG
CTGAGCTTTAACTTGGAACGTGAACACAACAAAGTTATCCAAGATTAAGTTCCCCAACAA
CTGAGAAATGGCTATTGTATGTATTTTCGCTTCAAATACTTCAAAAAAGTTATACGGTAA
CCTAAGGCAGGCATTATCCACTTAAGATACATATCCTAATGCAACTAGTATCTACTTAAA
ATGTCCATTTCTCCTAATTCTGCCTAAGCCGTAAGGAGACACGAACATAGTATAGTTAGG
AACTTGGGATAATCAATTATAAGTACGATCATTTATGTTAGTTGTGGAGAAGTGAATAAA
GCACATCAACAGAAAAAAGAAAATTCAGTGGAGGTAAATTTGCATAAATGATTCATGGGT
TTGGGTGATTTAAAAGAAAAAAGAACTGACATAATGCCATAATCTTCTAAAAAATGAAAC
CTTGCTCTCTTAACTCATCTGATCACTTCTAAAAACATCCAAACTATTCATGTACGGAGT
ACTTACATTACCAAGACAGAGAGCAATATAGTCAGCTAGGAAACTTCATACAGGGCAACA
TTAACAATAATGAAAAAGAATAATGATCCTTTAAGTCCTGAATGGTCGTTTTGCAAGTTC
AGTACTCCCTCCAATCCATAACGAGTGTTGCAGTTTTGAACTAAGGTTATGTTATGACCG
GCGTACATTATAGCCGGCGGAGGCCCACGGGCTCAGGCAGTGTTGCAATTTTGAACCTTA
ACAAGTGTTGCAGTTTTGAACTAACCTTAACAATGTTGCAATTTTGAACTAAGGTTGAAC
TAACCTTAGCTCAAAACTGCGACACTTATTTTGGATCGGAGGGAGTAAGGTTTAAGCAAT
GATGCCTTGAACAAAGATGAGATGTTGCAATTGAAATATACTGGAAGACTGAAGGTTACC
TCAAGCCTTGGAACAGAACCAGCACCAGAAACAACATCTATCAAAGCAACCAAGCAATCC
AGCTTCTCATCGATGCTTAGGTCTGAGTACTCGCCTTCCATCAACCCCAGAAGCCATCGT
TCTCCAGAATAACTTTCATCAATTTCACTGCATTTATTCATATTTTTATGTATGTTTTTC
TGTTTCCACCTGACAATTCTACTTTCATGCTCAGGATAACTCTCTTGTGGACCATCAGAT
TCATCACCACTGCTGCTAGCATCCCCACCATCATCAACAGTTCCAGAATCCTCGGTATCT
GATCTAGGATCTTCTTTTCCTTTAATCCGAGGATCAACACGGAGACGATATGCAGAAGGC
GCAATCTTCTCAAACAATGTGATGTCACCAGAAAGAGTTGAGAAAATAAGCTGCTCTACT
TCTGATGCGCCAGAGAGATTAAGATCAATAATCTGAAGAGAACAATCAAGTAAATGCCAC
GGAGATACTCAACCAAAAGTATATACAGAAGGCCAGCTATCATCAATATGAACAGTTTAT
TTCTGCAACTACCTGTGGTGATTTGGCAAGTTCAGCAACCTTTAACCCACCGCTTCCTTT
CTTAGACAATAGCTCAAACAATTCACCTTTCAGTGTACGAGGACGTAACCCATATTTAAC
CATTTGATTTTTTTCCTATAATTAAATAAAAGGATATATGTTACTTTGAAACATAATAGA
AGTACTTGTAGGGGGGATCTATTGCTACCGCATATATACAAATATTGGTAGCTGTAACCT
GAAAGGCATGCACACCCACATACAAGTGTTAGATCTAGAATAATGAGGTGTCTCATTAAG
TACCTTGTTAAAGAAATTCCGATTCAATATATGATGGTCTGAACCAAAACCTGAAGCAAC
CAGAACCTGGCGTAGTATTTCAACCCAAGTAAGAGAATTCAGGGATTTAATCCAAAAATT
CACATCGAATTCTTGTTCTCTAACCTGAAAGAGAAACATAGAGGCAAACCATTTAGCTAT
TGCATTTTTCAGAATAAGTTCTTCAAACAGGAAGCAGGTATGCAGGATGATAGTTCTCTT
ATGCATTCATTCAAGACATTCGCCCTAATGAAGCAGCATTAAGTAGTCTGAATTCTATCT
AGTTACCTCCCATCGAATCTATAAGAAAAGAAAGCAAGACAATTACTAGCTCAGTGAAAC
TCGGACTCTGGTCCTCATTTTATGGGAAGTATGACAAGAAACTGAAACAGAAGTTTTGGT
GCTGCAATTAACAAAGTCATGGAACTAAATAAATGTAAACATGAGAAGAATAGCATAGTC
AGTTTCTTCACACAAAGTAGTATGATTTGTCAGACCATATAGAAAGATAAGGATCATGTT
GATGTCACACTTATTGGCTACTGCACGATCACTGTTACTCAATGTAATGAATTACGATGA
ACACAAGTCAGTAGCATCATGCTACTAGAAAACAAAGCCGATTCATCCTAAGCTGTCATT
TATTAGACCCTGTAGGCCCATATTGTTCTTCAAGGAAACCATTAACTTGATACCCAGAGT
AGACTGGAACAGGAGCATAATAAAAAAAAGTGCATGGTAATGAAACGGTTCGACAAATTG
CTCAACTTCAGCACTAGTCTAAGACCATATACTTTGACTTCCGAATGCAGCATCATATTC
GAACTATAAACTTTACACAGTGTGCAACAAATTCGCCAATACTTCTGCCAACATAAATAA
ATATACCCAACAAGGTACAATCAGACAGAAGAAAACTAATAAAATGAACCTACTACTAAG
TTCTCCACTCATTCAAAAATCATCTGTGAACTGTCCGACAATGCTGAAATGACACCACAG
CATAATAGCTCTAGAATAAGCACAATGTAATTCTATCTTGGAAATGAACTACAGTGTACA
GCACATTTCAAAACTCACAAAGTTCAGAAAGCTTAAGAATCTGCTATCTTTAGACGATCT
TGGAACAAACACACTGCCGCTGCCCCTTTCTGTGTTTAACATAAGTAGCTTGAGAAGACT
GACATGTACTTTCCCCAACAACGAGGAGTCCTGGAGGTCACATTTGCACAATAAGAAAAT
AATACAGCAAATCATACCAATTTCAGGGAGATTTAACAAAATTTGCACCTTGTCATGAAA
TGCTTGTGCAAACTCATCAAATGTAAAGGGATGAACATCCATACTACCAAAATGCGTGTA
GACAAACCGGACAACCTGCCAAGAATATTTTTGAATTAATAGATGCTAGCCACAGTTCCA
ACATGAAAACTAGTAGAGGAAAGCCGGGCGCACTAAAATCTACGAGCACGACAGTAACAC
AAACAATAAGTGAAGGAAGAAAGAATTTTTCAGTTAACCAAGTACATACGGGCTATTGTG
ATTTTTAACAACATGCTTAGGCCACTAATGCTCCAAACAAAATAACCAAATATATTATAG
GAGACATGTCTAATATTCCTGCTGGCCAGATGAAACTAAATCCGGTAAACTACTGGTTGG
ACTCATGAACAAAATTGGAACCAGTATGGAAAGATTACTGAAGCCAGTCTTGTTCCACGA
CCAGCATTAGATATGTACGATCATTCACTATCATGGTTTTCGAATTGATGAGTTGACGAG
TCGTTCAAAGGTAGCGACTCGTGATGAGTCGAACCTGGCCAGTCGAAGAGTCGCGACTAG
TCGAGGGGTTTCAGTCAACCCTGGCAGTGCAACTCGTCGAGAAGTCGACGACTAGTCGCG
TGACTCAAAATCCATGTTCACTATGCAGTAAATTCCATAAGTAAATAGAATATAGAAGTT
GGACAGACTGATCATGAGCTTTTTTCATTTCATGTAAGGTAAATTCCATTAATGATGATA
ATACCATTCATGTATTCTCAAAGTAATGTGTTGCATTTAACCTGGAAGAGCTTTTTCACC
ATTTCAGGTGATGACTCCCAAGGTTTTGTGGGAAATGGTTGTTTCATCCTGACACCTGGT
GGAGGAAACCTGGCAAGTAAATCTGCAAGAGAAGCACTAATACTTAAGTAAATTGGCTTA
TATTAGAAAAAATGAGAACAAAGAGGTAGAGGATGATATTGCAAACCTTTACAAAGGGGG
CAGCCATGTCTCCCAGTTGAAGAAAGATGAGCTGAACATCTTAACGGATTAGGACCTGCT
TGTAACTCACTGAGCTCAAGCTCCTCATCATCAACTAAAGTAGCCTGTTCAGTTCGTAGT
TCTGAGGATTCTGATTCATCAACTGAAAGATGGCACTCCACTGGAGGATGCTCCGTCAAA
TCAGTAACTCTGCCACATGGCACCTAAAATGGCGAGAAATCACCATTAGCATACTACACA
AAAGGCAGATTAAGTTCCGTTTAACCAGATTAAAAAGGTTCAGATTCTCATTCTAGAGGA
CTAGAAGTTAGCTCATTATCTCCATATGTGGACTTCTCCAAGTAATAAAGCTTACCTTTC
TTTTACTCGGTGGAGGTCTACTCTTTTTGTTTACTTTCTTCCGTGGCAAAGTTTGTCTCT
GCACCTAATAAGGTTAAAAGGAGGAAATTCTGAGTTGCTAATTCAGAATATACAACTACT
AAAGTTTCAAATAACATAGGCTGTATCAGATCAAATTAAATAAGCAACTTTACTTGGGCA
AGCTTTCGATCACAATCTTCGAATGGTCTCAATGACCTCAAGCAACCACTTTCATCAATG
AAACTGGAGCAATCTTGAATTTCTGCAGTTTGGGAATACATTGCATGCCATACTGTCATT
AGACCTTTGCCCTTTCCATGCCTCCTCATAGGATCATTGTTCTCAAATGGCAACGTGGAT
CTCCGAGCAGTAGGCGACATGATCTGCAGATAAACATTTTTTTTAGAAAGGTGGGCACCT
GACGTTAGAGGTCTCAATATAACAAATGAAAACAAATTAACATGGATTACAATTACAAAA
AGGGACAATAAGCACAAAAGGTCAGTTTAGCTGACAGCATCTTCATCTCAGGCACAAAAA
TAATTTGTCAATCAGCAACTGGCAAAAGAACACAAGATTTCTAAGAAACAAATACAGTGG
ATATCTAATCTTACATCTAACCAAATAAAAATGACCATTAGAGTGCCTTCAGAAAGACTG
TTATAGCTGAATAAAAGTGATACTAAGGCAGGAACTGTAAATCTTTTATACCAATTCAAA
AGTGGGGGCCATCTCTTGGCCCACAAAATACATGGGATTTCTTATTCTATATCCTGGCTC
AAAAGTTTCCAGAAGCCATTTATCTAATTACAAAAAAGAGGCCTAATAATAAAATAAAGA
TAATGCGGGATCAGACTGACTACCAGCAGTCCAGCACAGAAGATGACACTAGCTCATGAT
CATGATGGCACCAAATGGTATGGCAACAACCAGTAAACAATGATTAACACGGAAAAAAAA
TATGTGCTAGAAACGATAATGAAAATGTGTACTTAGCCTAAATAATGAGTTAGTGACTAT
GCTTTCCTAAAAGGCTCTGGTACTGAAAACAAAAAAAATAATATCTTGACCATACTGACT
ATAAGCACCAGTCGTCATTAGCCACACACAGTGAGACGAGGCACAGCACCAACTTGAAGC
AAAAGCTGTGTTAGAAATGAAAATGAACACTTGAGCAGCCTAGGCAATACCTTTCTCTTC
TTCAAAACGCTTTGATCCTGGTAGGAATGATGTCCTGTGGTATCTGCGATCAATTCAACA
TGATATTGTGAGGGTATTAACCACATCTACAGAATGCAATTCGAACATTAAGTATGCAAA
ATACGTTAGCAGCATTAGTGTTAGAAAAGATCAAATGGGGATTGAAGGTGCTTGCAGATC
CTGCCAGTTGTACTCTCCTTGTTTAACCAGAAGTCTAGTTTAGTGCCATTACAAAGCAAC
CACGACTTGAAGCACCAATGAATAGGACAAACACAATCAAGCAAAAGCTGCTCGATACAA
TCTCCTTATTACAAATGAGTGAAGCCAACGAAAAGGTTGGGACTTCCATAGCATGCTAAC
TCGTTAACACAGTTAGTATTATTTTGAGATGGGACACAAGAATGAGGGAATGCATGGCCG
AAAGAGAAGGATGAAACTTACATAGCATGGTAAATAAACAATTACAGTAAATATCAGTGT
TTTGAGATGGAACATAAGAAATGCTACACTTACCAAACAAAAAATGAGACAATTACCAGA
GTTGTTAATAGAACTGTGCGGTTGATCAAGCTTCAAATCAGGTCTTTTGCATGGTTTAAC
CTACTGGGACACATAGATAGAAAAATATGTCTATGATGATAAATGACTTTCTCGGCAACC
TTTAGTGCTACTAGAGACAGACCCCTGACATGGACATGTGCCCTTTCAGGAAGGGGATCG
AAATCACCCCCAAGAGATGGACCATCCTTGCGGAAGACTTTCCTCAGAATTATAATCCTT
TGGAAATAGGACTTGCGATCGAAGTGTGTGTTTCTCTCCTACAAGGCTCATACTCCTACC
AAGAGTAATGTCATCCTCGGGCTGGAAACCAGCAATACCTTGCATTGGAGATTGACTTGA
ATTGGAAGACCTGCTGCTGCTACATCTAGGCCAATTTGATCTTGCACTAGCTTGTGTTTC
CATGTGAACCTCTGCAGCTTCCATGTGCCTCCTCTCTTTCCGCCTCCGCTCTTTGAACCA
TATTCTGACCTGGTTGTGTGTCAAACCAACAGATGCCGCATACTCTGTCACGTCCTCCGG
CTTCGGATATTGTACCTCTGGATCGGGAAATTTTTAGCCAGAGCACAAAAAGTTGAACAG
CAAAAAAACAAGACATGACAGCAGGAAAAGAGCTCGAAACACTAGCAAACTGTTTACCAG
AATAAAAACTCTCCAGCATCTGGATTTGCAGGGGAGATTTCTTCGTCCCTGCATTATCGC
TCTTGGCGAGAAATCCTTTGGCCATCATCTGGAGAAACCCATAATTAGGTACCGGCGCAC
AGAGCAGGCGAGGCGAGTGACAGTAAACACCATGTTACCAAACACTAAAAGGCCCGGGAA
ATGGTAGCTTCACGAATCTTAATTTGTGTTCAAAGGGCTTAAATGCTGAGAACAGTGACA
ACACAACTGGGAAGCAAGTAAGCACAAAATTACATAATCCAGCCTTTTCCAGTTGCCAGG
GGCGGGAGCAACTCGAATTTCTCTCGTCGGCTGAACCATGGGCGGATCCAGGGCCAGAAA
TTGCGGGGGGCAGTGAGTGGTGTTTGAACTTAATCAGTGGGTGAAAACAAGCTCGTACCT
CACAACAGCCCAATTGGAAGAGCCCGCGGACGGGGCGCAGGCGGCGAAGTCGCGACGGGG
AGGAACGGGGACGGCGATGGAGGCGACGCGCATGAGAGGCGGGTGTGCGCCACGGGCAGC
GAGGAGCGGCGGTGGCCGGCGGGCGTGGGGGTTCTAGGCGGCGGCCATGGATGGGGAGGC
GGCGGCGAGGTGCGGTGCTGGGGGTGGTCGGGAGGTGGCGGGGAGGTGCGGTGCTGGGGG
GTGGTCGGGAGGTGGCGCGGGGGGTGGGGTTCAGCGGCGGTGATCCGGCTCGGGGGGGGG
GGCGCGGGGGATGGGGGCGGGGGGGGGGGG