Contig Data
morexGenes
Links



Map Locations of contig_137376 (5223 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137376

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6320 3 891 bp AK372883 Available Available None





CDS Structure of MLOC_6320






Contig Sequence (5223 bp)

>contig_137376 5223 assembly3_WGSMorex_rbca.fasta
AATGATCCTAAGCTTTAACTTGAAGAAGGGAAATAGTTGATTACTAAACCTAGATGAGTA
CTCCTTTATAATTTGGCCAAGAGGCAAGACTAATAACCATACCAGCTATGCACCTATCAA
TCCAGCGAAGGGTACAATACATAGCTTCCTCTATCCTCGGGTCGGTAATTGTTGTCTTAA
CAACATCATCAAGAGCCATGATTATATCAGCTCCAATGTTGTTCTGCATTCATGTCCCGG
AAATATAAAGGATGGGCACACAAGTGTTAAGATATAAAATCAGCATTTTGTGATAGCAGA
AGTCTAGTTCACAATGACTCAACGAGTTCAAAGTTCATTAAGGAAAGGACATACCTGAAT
ATGGATTGATTCCTCAGGCGTCAAGAGCATGGGTTTCCCATCAACAGGTGACTGTAGATT
GGACACAGAAGAATAATAAAATTAGAGAATGTGCAAAACAGAAAGCAGTTCTCTGCAGCA
GTAAAGTTTATCCAGGGAAACAGAGAAACAGATAAAAATGCATTATGAAATGCTGGGGAA
ATTCATTTCCACAAATGAAGCCACAGAAACTTTCTGCTTCTAGCATCAACATAAAAATTA
ACATAGTAGACAGATTAGAAATGGAGAAGTTAACTGTCGGCTAGTCGCTGGGAGAAGGGT
GGCAAGCGAACCACTTTTGATGGTAGTTTTAAATCTGAGACGAGATCAAAAGATGGCAGT
TTAGAAACGAAAATTGCCTTCTCTAACAGAAACTGCCATGTCACTCTGAAGAAACTACCA
TCCCCTCAAACTAAAAATGGCACCAAAATCGTTCGCAAATGCCACCCCCTCCTGGCAACC
GTTCGCCAGCTAAGGGGGTTCTTAGAAAAAGGATCGCATTGGACATTGTAGATCATGTCA
AAATGCGGCGACATGACACTTGATTTATTTATTATCTTCCCGCAAAAAAAGATTTATTCA
TTATTCAATATCTGCTAATGAAAAATAATATCAGTTAATTGTACATCAGTCTCACAGGAC
CACTTGTCATATTGGAAATTACAGTTTGCACAATTGAAAATAGCAAGATTACATGGAAAA
ATGAAAATATAATTTTGAATAAAATGTACTACATAGAAAGACATTTAAATAATAACAATT
CAGTTTTATGATGAAAAAGCAAAATCTTAATACTTGACAACCCTAAAATAACCTGAACCT
GCCTAATTATTTTGTTACTCTATGATAACAAACATGAGCATCATTTGTACGAATCAAAAA
TTAAAAACAATGGCATACCCTAATATATTAGTAATTTAATCTGACTAAAGGGTACAATAG
TATTAGATAGTAGGTAGATGTAAAGTGTACCTGAAAAGTAACTCCTTCCTCAGTAATGTC
AGCCAAATGCAGCAAAGAGACCTAAAACCATGTTGACAAATTAGTAATATTTCAGAAGCA
GACCTAAAAGGGGCATGAAGATAAATAAGTGAACATGTCAATGGTAATCTTCCAACAAGC
ACCAGCTTTCCTCTTTTGAATAGATATTTGACTGGAACCGGTGCTAATGTAAATATCACA
GATGGAGCTCAGCATGCAATTTAATATCTAGTAAACAACTACATGTTTCAAATTTTGCTC
GAAAGTGGAGCCACTTGATGTGCAGAGCCTAACTAATTGCTAGTAGAACCAAACAGAAAT
ATTAGCCATCGCATATCATTAGGCAACTGGCAGAAATCAACAATTATCACACACGATTTA
AACTAGGGCACAGGAAGATTCATTTACAATGGAAATGACATATTTTATTTAGTATTGACT
TGGCTGAGTTAGTTTTGCGTGTTCAAATGGTGAACTACAAAACTTAATGTGAAAGGTAGG
ATGATAATGATTTGGAGCAACCATTTGGAAACCACCAGAGTCAGTCAGCAATGCCCTTTT
CCAATTCATAAACTTGTGAAGGCCACCCAAGTCATCAATAAGTCGAGAGCCAGGACGAAG
TTCAAGATGGTAGGTATTTCCAAGTATAATCTGACAACCTATAGCCTCTAACTGGTCTGT
AGCCAAGCCTTTTATTGTACCTGAGCAAAGAAAAAAAAACATAGGAATGACACAAGAACG
ACTGTGAGATGCAAGAATCGCACACATCATCGGGCAAAGTTGAGTCACATCCAAAATCTC
TTAATCACGGTATGAAACTGAACTAGTTTAATCAGAAAGAAGTACACCCAAACTGGGTTA
ACCGAGAATAGTAACTCATTGTTGAAGTCAATATTTGCTTTAATGATGAAGATTGGAGAG
TGAAGACATGCAAACTAAGAAATTTGAATTTTCCATGGATAAGACAATGCTAGAACATTA
TTCATCAGCACAGTACAGGTATAAATCCGACATTATCCATTCAAGTCGCCTCTAATTACT
TGCATGAACTCAGTTATACAAAAATACAGCAAGTTCATATTTTACACAAGAAAAGGCTCC
ATTTCAGACTGAACTAGCATATGGCAGAGAAATGGTACGAGATCCAGAAATATAATACCT
TGGGTTCCAACAGGCATAAAAAGTGGCGTTTGACAAGTAAAGTGCGGCAGAGTTAACCGA
GCAGCTCGAGCGCGATTAAATCTTCCTAAGACCTGAAAGCACAAAACAAGATAATTTTCA
CTCCAGATTCATCTTTATGGTCAATGTTTCATCATTAAGGTCTACTATTCAAAACTCGAT
GTTCCCAATTGCTAGAACTTAGGTTCAACCAGCCAGCTTCCATCATTTTGTCCAATAGAG
GTGATGAGGTTTGACAGTAGCAGCAATATGAGCTGTCAGTGGTACCACTACCACTGCACC
GTCTATCTGTATCATTCTGAGAGCATGTACCACGTGGAGCCACTTTTCAAACTATTTCCC
TTATTCTTTTTCGTATTATATGGAGGTATGGACCACTATAGGCCTATCGCATATCCTCTG
AAGAGTAGTAAAGAAAGAAAACATGAAGATTTTACCTTAAGAGAGGCACCAAATACAGTA
TACCAGGTAAAGACAATATGTAGGGAACTCTGAAAAACACGTGCCTAAGGCAGTAGGTGC
ATTAACTGTGAAGCACTGGTCAGCAGTAGCACTACTGCACTAGTAGTCAACAGTGATTCC
ATGTTAAAACAAAACAGTATTAGCCTAATTGGGAGTCTGTGGTTGCAGAAAATCATCTGA
GACACTACATTTATTATTAGAACCCAACATTGCATCACATCCAAACGTCATAGTATTAAT
TTATCAGCTACAGTACGGAAGCAGTACGATCTTATCTATTTCGTCACCACTAACTTCTTC
AGCTAAACTCCAATTTGCACAGTCCGAACAAAGAAACCGCCGGGGCTGCTCATCTCAGGA
ATCGAAGGGCATGGACCAAACTACAGAATATGAAAAATGTCGAACCGAAAGCTAAGCACG
TGTTGTTATTATCCATTAATTAAAACTTGGACGAACCTCGAACCGGAGCGCCATGGAGGG
AGGAGGGTCTCGAACCACTGAGCCGGAACCTGCGCGCCAGCGTTTCCAGTTAGCTCAGGA
GACGAACTCGAAGGCGCGAATAGCAGAGGGGGGTGCTTCTCTTTTGGCGCGAAACAGAGC
GTCAGGCGCGAACCGGCGGAGGAGTGCGGCAAAACTAACCTGAGCTGAGACGTTGGGGCG
GTAGGGCTTGTTGCAGAGGCGGCTGCTCTCGCCGGCGGCGGGGGGGAGGAAGCCCTAGAC
TGCCTCGGCTCCTTCCAAATGGAAAGGGAAGACTCCGTGGCGGCGGCCGGCGGAAGCCTA
GAACTCGTTTAAAAAAGAGGACGGGATTTTGCACGGAGCACCCTGTCGTTCTCGCCGCCG
TGTCGCCCGTTCTCCATTACAGCGGTCCAAGGCCTTCGGGCATCGGCCATGGCCAATATT
ACTACTCAGCCCATGACTATGCTTTTGGGCTTTAACCGTCGCAGCCCAAGGTTGTCTCCC
GTTGCAGCCCATGATGGATCATGTCATATCAAACCGAGCCACTTTTCACCGGGAGGTCCT
ATACGCCGCTCGCTGCGGCAAGCAGTCGGCCTCCCGCACAGGAGTTCCCCTACTGGAAGT
AGAAGTGCAGCCGCGATCTACTGGGCCGGCATCACAGACACATTTCATATTTATTGTAGC
ATACAACTATTTCAATTGTTTGAGCACATTTTAGAAAACACGAACATTTTTTTGGAAAAT
TTCAGATTTAGAAGTAGTTTTTGTTGAAGTAATCCAAACATGTTTATTGAAAGTTTGGTA
AGTGCTAGTGTCTCATGAAAATATATGTAATAGTTTTTATGCAAAGTTGATTCCGTATTA
GGATAGTTGTAGCGGAGTCGGTTCATGTGTTCAAGTTTGGTAGTACTAGTTTTATGTTAG
TAGGATTAGCTTAATTGAGTTCAGTGTAGCCGGTAATTAAGAAAGTGTGTGTCTGTGTAT
GACTTGCATGCCATGAGTACCGAGTCATGTTCCGAATAGTATTTAGCGTGTCCGTGCGGT
AATAGGACAACTGCCGGACTATTTGGCGTGTATGTGCGGTAATAGGACAACTGTCGGGTT
TGTTAGCTATACAAGCTTTGGTCCTATATATACACATTCATATACGTTGTAAGATTGCAT
CAGAAAAACGAGAAAAGCAATAAAGAGATATTTACGAGGCACGACACGTGCCTCTGGCCA
TCTTTGTGTTACTGTGTTCGCGTGCGTGTGTTCTGGTCCCGGTGTTTGGGTGAGTGCCGG
TGAGATATCGAATGCTCAGATAGTTCGTATACGTCGAGCCGAGTTGCGCGTATATGACTA
GTCGAGCTGCAGGATGATCGTGTGTTCGATCCTGAGGGCGAAAAGCCAACAATTGGTATC
TAGAGCAAGGTGTGGAAGCTTCGCCGTCAAGTTGTGTCACGGTGGAGTTNNCGTCACCGT
CAAGTTGTGTCACGGACAACGGAAAATCGAAGAAGAGAATCATGTCGACTTCAAAGGCGA
GTGGTGGTGGTGTGACCACCCAGTACCCCATGCTTGATGATGACAATTATGGGGTGTGGG
CCGCGAAGATGAAAATCTTCATGCGTGCGCGTGGAGTTTGGGCAGCGGTGGAAGGTGACG
GCGCGGTCGAAGAGACAAAGGACCAAGAGGCTTTCGCCGCCATAATTCAAGGTGTGTCTG
ATGCTGTTTTCATGTCCATATCGGAGAAAGAGACGGCAAAGGAAGCTTGGCAAGCGCTCA
AGG