morexGenes - Barley RNA-seq Database

Contig contig_137342
Source Contig contig_137342
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_137342 (6054 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location
Predicted Genes from contig_137342

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_6294	1	1535 bp	MLOC_6294.1	Available	Available	LOC_Os02g57110.1, FRAME:+1, EVALUE:0.0, 13102.m06569 protein GDSL-like lipase/acylhydrolase, putative, expressed
CDS Structure of MLOC_6294

Contig Sequence (6054 bp)

>contig_137342 6054 assembly3_WGSMorex_rbca.fasta
TTTCCATACAACTTCAGGTGAGGGTCTTTACTCTGTTGTGTCTATTCACTTATAAGTGTA
ATTGATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATATATA
TGTACATCTAATTAAGTAGGTGCGTGCCATGCACGTCTAACATCGATCACTGTCATCGGC
GCATGGTATTAATCAGACAGTGACGCCCTATCAACCTCATCATCGATCCCTCGATCGACG
ACAGCTGCTAGCTCGTATATGCATGCTGCGGCAACATCGTATGTACCAAAAGGGAAGGAT
AATTGATTGATCGAGCCATTTTGATAGCTGCATACGCGATTAGCTTTAAGGCCGGACCTA
AACCGTCGTTTTCGTTGTAGGTAGGAGACTAGGAGTAGTGAGATACGTACCACCGGGAGC
TACAGCCCATGCAGCGACCTCGACGTTGATCGTCGCACTCCGATGATCCTACCTGGGAAT
GTTCAGAGAAATGTGCCAACGCACGCACCTCATTTCTGAAAAATGGCGCGCGAACGTAAT
GCTGAAAAGCTCGAATTCAGACGGGGGAGCTGACAGTTGAGGGGCACATGCTGACATGCG
TACGTGCTCCGTGCAGCCGTAAGGCAGATTCAGGTTTCAATGAGCTGCAGGTACACAAGA
ACATCTCACCGGCCTTCACCAGTACCCGGCGGCAGTGGTAACTCAACTGTCTGCTCAGTG
AACCCTGCACTGCACCTGGCGGATCGACTAATTTGCCGGAGCCGGCAGGAGGGAGCCAAA
GTCGAAATCCATGTACGTACTTCACCTGCTGCTTCTGCTTCGGCTTCGGCTCCAATCCAT
CCCGGAGTTAACTCCGTTTTCATCCTCCATGGTGTCTCTCCGGGGAGGGAAGGGAACACC
GGAATTCAATGGCCTCCATAAGAAGGTGAGTGAACCTACCATGGATCCCATCCGTCCGGC
GGCAGCTTATTAACTTCCCCCGCCAGGTCACACGTCCGTGATGGTGGAGTACTTCTCTGT
CGATCGAGCCCGGCCCACCCTGTGAAAACCAGGGCATGTGCGCTGCAGCTCGCTAGCTAT
TACTCCTAGAAGATTCATCTACTGTCTAAACTGTTTGTAGCTTGGCTGGTTTTGTTTCAC
CATGCCTGCCTGCCTGCCTGCCTGCCTAGATTTGCCTAGATTTAACTGCTGTTCAGACAC
GCGTACCTGAATTCATCTATAGATATTCCAATAAAGCCTTTCTAGATTTAACTGCTGCTG
CTCAGAGACACACGTACCTGAATTCTGGAGTAAATGCCGCGCGGCTGAGGGTTGGGGATT
GGGCCCCTGCCTATGGCATTGCACTACGTACTGCAATGCAGTACTGCTTGGGCACAGATC
TATCTAATTTTACATGCATATGGATATGGGGTTCCACTTCCACAGTGAAGCTTGCTGAAC
CAAAGCCCTGGCTAATCTAGAGCCTGGAGGAGACAGGCAATTACATGATGAGGCAGTCGA
ATCGAATGGTGCTCCTCGACTCATCCACTGATCGATCAATGTGCTTCACTGGCTTCTCAT
TGGCATGGTTACAGCAGCCACTACTAGTCACTACACTACATACTCCAACTGAATCCAGGT
TTCATTACGTAGATGATAGATAGATCCAGGTTTCATTGCGTAGATGATAGATAGATCCAA
CAGCCCTCTTGAATGAATAATAACAAGTTGCCGTAGGTCACTGTGAATCAACAACCGTGT
TGGACAGGATGGCAACCGTGTGAAATGGATTGACCATCATCATCATCATCTTCATCTTGC
CAAGCAATGCTCTTCACTCGCTCCTCTGGGGTACCCTGTCCGAAATTCGCAAGATCCTTG
ATCTCTTATCCCTGAAAAACGCCGGCCGTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTCG
CAGATCCAATTGATGACGAGTCCTAGTTGCACTAGGATCCATGTGATGTGCAGATATTCA
GATGGATCGGAATTCATCATTCACCCTAGGTACGGTACTGCAAATCGTTCACCCTATGTG
ATGCTTCACGCAATTAAACAGAGTTGCCTGTCCTCTGTTTGCTGCGTACTGAACAATGAG
ATGCCTCCCTAATGAACGCACTGTTATTCGGAGGGTAAGCACAACTATTGATCGCGCAAA
GGCAAATCGATTAATTGCAGGACGCCCTAGTAAGAAATCGATTCCACCCCTGTTTTTTTT
TTGGCTCATCATTCATGCGAAAACAGCCTGCAAAGATCCAGTGCACATCTGAAACTGCCT
ACACCAACCAAACCCCAAAACCGGCAAGGGATTACTGTATATACCACGGGACATAATTAC
CAGAGAATTAAAGGTCCACGCGCGAGCACTGTGACCAGCACAGCAGGTGCACCAACCGCA
CGCCGTACGGGCCACGCGGAGTAAATTCCGGCGACGACGACGACATGATCCAAGCGGGAG
GTCAGTCGACGGATGCGCTATAAATGGCGACTGCACGCAACGTTTCAGTGCATCCACCAA
GTGTACAAGCATACCACACTGCTAGTACATCTCTTTCAGTGGCAAACGGCAAGTGAGTGA
GCGACTGGAGGGGAGTGTGGAGCGATGGCAGCAATGGCGGCCTCCTCGTGGCGAGTGGCT
CTTGTCGCCGTCGCGCTCTGCGTGCTCCCGGCCCTGCCGGCGGCGAGCGCGGCCCGGGCC
TTCTTCATTTTCGGCGACTCGCTGGTGGACAATGGCAACAACAACTACCTCATGACGACG
GCGCGCGCCGACTCGTGGCCCTACGGCATCGACACCCCGGACCACCGCGCCACGGGGAGG
TTCTCCAACGGCAAGAACGTCGTCGACCTCATCAGTTGAGTGGCGAGCTATATATAACGG
CCATGGCCAGATTATTTTAGCTAGCTCATGCATACACGCATGGTTGATTGATTGACAATG
TTGTACGCAGGCGAGCAGATAGGATCTGTGCCGGTGCTGCCGTACCTGAGCCCTGAGCTG
GACGGCGAGAACCTGCTCGTCGGCGCCAACTTCGCCTCTGCCGGCATCGGGATCCTCAAC
GACACCGGCATCCAGTTCGTACGTGCTTCCTTTAACCGATCGACGATCGTTTAGTGCACA
CTTTCATTCGATAATTAACTGTATAATGCATCATCGGACGTGCAGGCCAACATCATCCGG
ATCTCGAAGCAGCTGACCTACTTCGAGCAGTACAAGCACCGTCTGGCCAAGCTCTACGGC
CCGGAGCGGGCGGCGCGGGTGGTCGGCGGCGCGCTGACGCTCATCACCCTGGGCGGCAAC
GACTTCGTCAACAACTACTACCTGGTGCCCTACTCGGCCCGCTCCCGGGAGTTCTCCCTC
CCCGACTACATCAAGTACATCTTGTCCGAGTACAAGCAGGTGCTCCGCCGCATCCACGGC
CTGGGCGCGCGCCGCATCCTGGTGACCGGCGTCGGGCCCATCGGGTGCGTGCCCGCCGAG
CTCGCCATGCACAGCCTCGACGGCAGCTGCGACCCGGAGCTGCAGCGCGCGTCCGAGGCC
TACAACCCGCAGATGGAGGCCATGCTCAACGAGCTCAACGCCGAGGTCGGCCCCAGCAAC
GGCAACGGCGCCGTGTTCGTGGCCGTGAACACGCGCCGCATGCACGCCGACTTCATCGAC
GACCCCAGGGCCTACGGCTTCGTGACGGCCAAGGAGGCCTGCTGCGGCCAGGGGAGGTTC
AACGGCATCGGCATCTGCACCATGGTGTCCAGCCTCTGCGCCAACCGCGACCAGTACGTG
TTCTGGGACGCCTTCCACCCCACGGAGCGCGCCAACCGCCTCATCGCCCAGAACTACCTC
TCCGGATCCACCGACTACATCTCCCCCATGAACCTGTCCACCATCCTACACCTCGACCGC
CACCTCCACGACTAGAAAGAAGGCTGGGCGATCGATCGATGCATGGTTCAGCCTCGCTCC
ACCATTTGCTTTGCGGTTTCATCACTTGCTTGGTGCATTTTCATAAATAGCAGCGCGCGG
CCTTCTTGATTTTGTCCAAGGAATTAAACGTTTAGTTTACGTGTATTCATTCAAAGTACG
TATGTATGATCCATGTATTTCAGCTGGTATAGCGTGTCGGGTTGAGGTCGTTCTAGCTAG
TTTGTGTAATAATCAGCTAGCTAGCTAGCTAGCAGATAAATATATCCATAAAATGCATGC
ATGGTTGCTTGTGAGATACTCCCTCCTACTACGGTCGATGTTCATATACTGAACCATGGA
TGTCGATTTTGATTCTCAATTGTCCTTTTCCCTTGAGAGGATACAATTTATAGCTAGCTT
CATGACGCAGTAATTAATCTGACGCAGAAATTGCTAAAACCGGAACAAACTCATCATCTG
GAGATCGACGATCAGGCTGGCATGGGTACTAGCTACTAGTCGCGAGCAGTAGGCAGCATG
TCGGCAATGCTACACATACATAAGTTCACATATGTTTTATAAAAAGGTAAATTTTAATTA
AAGATTAAGGAAAATGACGGCCTCATTCTTTTAAAAATCAGGAGGGAAGTGGTTAGTTAG
AAAGAAAGAATCCTAGTTAGCGTGTAACCTTATGTAACTCTTTGTATGTCTAGTATTTTT
CGTCGTCAGGTCTCCCTCTCCTCAGTCCTGATTCGTAAACAGTGGCACCTCCAGCTGCCA
TGCTATTTAAGCGCCCGGATGGGCCCATGTTTTATTTAGAGAACTTTGCGTATTCAGAAC
ATCTACAAGCGGGCTAGCTAGCCAAATCCGCAGACGCCTCCGTGGGCAGCCGCACATTCA
ATACAATGTTTAAAATCACAGTCGAAAACAAACAAAGCAAATCATAGATTAATAATTCTG
ACATGTTAAAATAAAATCGGTATCCGAGCATATAGGATGCCTCGCTCGCTGGCTGGATCA
CTAGGCAGACGCCATCCATGCGTGCTGTTTTGCGTGCATCCGGGCTATATGCTACTCCTG
CATCCTTGCCGCATGCTTCGCTCCATTCTTGATGAATGCTCCGCTGCCGCCCTCGCCATC
ACGTATTCTCTACGCTCATTGAATTTTTTTTCTTCTTCTCTGCAAGCAGGGGCGGAGACA
GGGGGATGAGCAGGGGCCTGCCCCCCCCCCCAACGGTCGACAAAACCTGAAGTATCTAGT
GTATATTTGACTGATATGCGTAAGTATGTATGTATTTGCCCCCCCTATGAGTGGTCATAT
CCAAATCCTGGCTCCGTCACTGTCTGCAAGCCACTTCTTTGCATGCTCATCTAAAAGGGT
TTCACCCGCCAACATGATCTTGGCATCCTTTATCTCCTGTGCCAGTTGCAGCATGTCCTT
TTCAAGCTCAATCTCTTCAAATGTCTTGACCTTTTCGAGCTCCCATTTAATCGGCGCCTC
TTGCTTTTCCAATTCGACCTTCGCTGTCTCAATTTTCAACTTCTTTTGCGTCCTCTTCAT
GTCCCAATCCATTCTTTTTTTGCACATCCAACATGAGCTTGTACCTTTAATATTTCTTAT
TCTCTCTAGCCAAAAAAAATTCCGTTCATGTGGACGTCATTTTTGTAGCAGCTGTGTCAC
GGGTGGCCCTTGCCTACTCCCACATGTTCTCCATGAATTGTCGGTTATCCGCTGACCCAG
TGGCTCTTCCATTCTGGACAACAATACCGTCCTCTACATAGTCCAGCTCAATTGATTGGT
GGGAGATTGAGCCATCATTCCTCTTCTTTCCAACCTTGAGATCGACCACAAGTTGTGTCC
ACTTTGGCACTCCGTTCAATATGATCCAACAATGGCTAAAAGCAAACAACTTCTTCTGTG
TTTCGTGATACAAAGTGACTGCCATCGCCGTCTAGCAAACAACGTATGTATGAGCACGAG
AATGCAAACACAAGATATATATATGCAAATCATGACAAGATGAAGCAATTGAGCTTGCGT
TAGTTGGCAATCACATCCCACTTTAAGGGCGGTTGGTCACTTGTGAGTAGTAGCTGATGT
ACTTGTTCACTTCCGTCTGAATGACCCCCCCAACGTGTTGGGGAACGTCGCATG