morexGenes - Barley RNA-seq Database

Contig contig_137319
Source Contig contig_137319
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_137319 (7037 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_137319

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_6279	1	405 bp	None	Available	Available	None
MLOC_6278	1	810 bp	MLOC_6278.1	Available	Available	LOC_Os05g28210.1, FRAME:+1, EVALUE:1e-26, 13105.m02905 protein small hydrophilic plant seed protein, putative, expressed
CDS Structure of MLOC_6279

CDS Structure of MLOC_6278

Contig Sequence (7037 bp)

>contig_137319 7037 assembly3_WGSMorex_rbca.fasta
GAAGAGGGTTACGCGGAGGTGGGCGACAAGGGCGGGAAGCCTCGGAAGGAGCAGCTGGGG
GAGGAGGGCTACCGCGAGATGGGGCACAAGGGCGGCGAGACTCGCAAGGAGCAGATGGGA
GAGGAAGGGTACCGCGAAATGGGGCGCAAGGGTGGGCTGAGCACCATGGAGGAGTCCGGT
GGCGAGCGCGCAGCTAGGGAGGGAATAGACATCGACGAGTCCAAGTTCAAGACCAAGTCC
TAAAGAATTGTGTAAGATGTCCAGTGCCTAGCCGAGTAGCTAGTCACTACTTACAAGTTA
CAACTCGTAGTAGTAGCGAGCAAGCTGACTGCTCAATAAATAATGTAGGTCAAGGTCAGG
TCTTCACGTAGGCGTGAGCACGCATGTAGGCGATCACATGTACTGTGATCATGTGTTTTA
GGTGTTTTAGTTTGTAGTATAGGTGAATAGGTGATCATGCCGTGCTTCAGGTATCCTAGC
TTGTAGTCAAGTCGTTGCTTGTAGTAGGTGTCGTTGTGGCTCGTGAATCAGCTTGCTTAT
GTATGTTTAATCAGAATCTCAGTATCTCCATCTGTGTTTTGTCCTTTCCCTTGGATCGGC
TAGAGAGGAACAACTCCCGACCGTACTGGTCATAGACAAATGGGTGCAATGCATCGTATC
CGAAATGCCCGCGCTCTCCACGCGGCTCTGGTGACACCAAGCCTCCATGTATTCCACCAC
AAAATCGCCCATGAAATGTTTTCTATGTAGATGAAATGGAGCAACATAAAAGTTGCTGGC
ACGAGAACTTTATCGTTTAGAGTGTTGTCGTGGCTATTTGATCTTTAGTGTCTTCTAATC
AGGGACGATTCTAGGGGGCTTTAGGCCTCCTAACAAATTGGCCTAACAAATTGATTTTTC
TATTATGTAAGTGGTTGTCGTGGCCATTTAATTTTTTATTATGATAGTGATTGTCGTGAC
AAAAAATTTCACTAACTTTGCCTCTTAGCTCCGTCTCTGCTTTTAATTAACTTGTTTAAC
ATTTTATTAGAGGAAATACAGATCAATCTATGATACATTTTTGTTTCCTTTGTGACCCGT
GAGTTCATGAAAGAACTCTAGCACCTTAAAAGCAAACAGGTTAGTTCATCGATCATGTGA
CTATGCAACCCAGATCAACTTTAAACGGATCATGGACATGTAAAATTACGCTATACATCC
CCACGTTCAATCTTGGACGTGGGGTTCTTACACGCGTCAATATCTCCTGATAATTATTTT
TATTTTCATCGGTTTTTCTGCGTCCAATTTTTCATTGAGATCCGAATGGACTTTTTTAAT
AAAAAATGCAATTACCAGAATTATAAACCTCACATTTTAGAGCCCTTTGATTCGCATGAT
CCTCAAAACGCAAGAATAATTTCACGTCTTCTTGTATTGTATTATAGAACTAGATAAATT
ATTTAAGGAAGATGAAATTTTTCAATGTAATACAAATGAATCCTATGAAAAGATTATTTC
AATCATGTGAATCAAACGGCCACGGATAGAAAATCTTTATATAATCAAACGGCCCAGCGT
AAGAAAATCCCAGAGATGTAGTTACTTTGAATGAAATAAGCATTAATTAGAGAAGTCCTC
TAGGTGTAAGCTTTACTTAAACATTTAAAATATTCTTGAAGTTTCAATCGATCCGTAAAC
AATTCAAATACCAAAAGGTGCAACTTCCATGTTTTTTAGACTTCACTGGACTTTGATCGA
TTGAGAATTTGAGATAATCTGCATTCACAAATTGCAACTTGCACTAATTAGAGAAATCAC
TAAACTTAAATCAGTTTTTACTAGACTTAAATGACCTCAGTACAGAGAGACACTGTAAAA
TTAAGCTAATAGTTAGGTTTTTTTATGGAGCCAACCCATTAAGATTTAAGCTAATAGTTA
GGTTTCTCGTGGAACCAATTCATTAAGATTTAAGTCTTAGATTTGATAGTGATGCTTGTA
TTTTTTGAATTTATTTTAGCCTTTTCAGCAGTGTTCCTTTTAGTGAGGAGATATGTTTCT
GCTGACTAGATAAAACTGTCAATCCCAAAATGTTGTAGTTCTAGTATTCTTAGTAGGATA
TATGTGCATCCCTTCATAAAAGTAAATGTATGTATGTATGTATGTGATCATTTTGCGGTA
GGACGGACATATGTTGTTATACCCTAGATCCGGACGGTAAAAAAAATAGATCCTGAAATT
TCCATACACTACGATTAGATCTAGATAAACTTTATCAAAAGGGTCGAAATATGAAATTTG
TCCCCTGGACGCAGCGGAGCGCGCCGCTTTATGGTGCGACCGGACGACAGCGCGGGACAA
CGCAGCAGGCGTCCAAGCATTTTTGCCCATACAGGACGTTTCCACGGATAGCGATGGGCT
TATACGGCCTCGCTCACGTACATATGTCCATGCCCACGCACGCTCGGCTGGCGCCGCGGT
ACAGCATGTAGAGTCCATTGCTCGTAGTCTCTGACCGGCCGCCGAACACCCGAGCATGGC
GAGCGCGAGAACCATGATCCTAGCTACGTGTCACCAGGACGACAGCACAGGACGACTCAC
GAGTCGCTAGCATTGGCAGCTCATCCAAAACCCTACATGTCGGTGCCCATGCAAGCTACC
ACATGTCATCCCACCAGAGGCTTGCATGCACGACGCGTCTTGATACAACAGGAACATGGA
GAGGTACACGCGCCGGCTCCTAGCCGTCCGAAGCTCCTCCTCGCCGGCTATATAATCTCG
ACGTCGCTAGCCCCTCCGCCATCACCATCAGGGAATCACAGAGCACCACGAGCAGTAGCA
TACAAAACCCTACATCCACTTACTGTTTCCGTTTAGCTAGGTCCCAGGCAGCGCGCAATG
GCTTCCGGTCAGCAGGAGAGGTCGGAGCTGGACCGCATGGCCCGCGAGGGGGAGACCGTC
GTCCCCGGCGGCACCGGTGGGAAGACCCTCGAGGCGCAGGAGCACCTTGCCGAAGGTATG
TGTGCTGTACTTGCGTTTCGCTTGAGCGATCTGTGACTTCTGATACTCAGTCCTGCCATT
GTTTGTGTATGCGTTTGTGCAGGGCGCAGCCGTGGCGGCCAGACTCGCAAGGAGCAGCTG
GGCGAGGAGGGGTACCGCGAGATGGGGCACAAGGGCGGGGAGACTCGCAAGGAGCAGCTG
GGGGAGGAGGGGTACCGCGAGATGGGGCACAAGGGCGGCGAGACTCGCAAGGAGCAGCTG
GGGGAGGAGGGCTACCGCGAGATGGGGCACAAGGGCGGCGAGACTCGCAAGGAGCAGATG
GGAGAGGAAGGCTACCGCGAGATGGGGCGCAAGGGTGGGCTGAGCACCATGAATGAGTCC
GGTGGCGAGCGCGCCGCCAGGGAGGGCATCGACATCGACGAGTCCAAGTTCAAGACCAAG
TCCTAAATGATGTATGCCAAGATGTCCCGTGCCAGTAGCTAGCTACCGGTAGTAGCGAGC
AAGCTGACTGCTGAATAAATGACGTAGGTCAAGATCAGGTCTTGACATAGGCGTGAGCAC
GCATGTAGGCGATCACATGTACTGTGATCATGTGTGCTTTAGGTGTGTTAGCTTGTAGTA
GGTTATCATGTGTGCTTAAGGTGTCCCAAGCTTGTAGTAGGTGTCGGTGTTGCTCGTAGT
GTCAACTTGCTAATGTATGTCAGTCGTTGTTGAATCCGAATCTGCATATGTGTGTTCTTA
AATTGTTCTCTGCTTGGACTGGCTAGAGAGTAACAACTCCAGAGCGTACCATCAATGAAA
TAAAATGGATGCAATGCAATGCACCGTAACCGAAATGCACGCGTTCCCACGCATCATGTA
TTCGGCCTTTCTACACTTGTGATGCTTGTCTTGTCTAATCAATCGTTAAGAAGCAATATT
ATAACTGAAGCAAGGACTGGACTACAATTCATTGAGAGAACTATATGAAGATTGATATAT
CATATCAAGTAGGGAGACTACATGTTTTTGTTCCATATGAATGAATTCCTAAATATATCT
CTTCTCTTCGTAGAGATTTCACTAGTGAACTATGTATATAGACATACTTTAGAGTATAGA
TTCAATCATTTTATTTCGTATGTAAACCTTTAGTAGACATACTTTAGAGTATAGATTCAA
TCATTTTATTTCGTATGTAAACCTTTAGTGAAATCGCTTNNNNNNNNNNTATTTAGAAAC
GGAGGGAGTAGATCAGAAGATGTAAGACTAGATAATGTGAAGATGCAATCCTCACAGGAA
ACTAATGAAGTCGCCACCCTGCCTCTCCTCCCCGGTGCCTAGCCGTCGCACTGCACCTCC
TCTCATCTGGCCACTCGCCGCCACCGGAGGAAGCAATTGGTAAAGTCCCTTGCAACAGAC
TGGGTCCTCGTCTCCTTGCAGAGAGAGAGGCCTCCGACGGGAGCGTGGCGGCTCTCTCCT
TGCAGAGAGAGGCCTCCAACGGGAGCGCGGCGCAGCTAGCTGGCCTTGACAAGCAAGTGT
GTGCGGTGGAATACCGACACCGTGGCGGCAACCCTAAGATCTTTGGTGGTGGCCAGGCTG
TCACGACTGTGAGACTATAAACATAAGGAAACGTCTTTAAATCAGACGGATGATTACTCG
ATGGGTGTCAGCCGCCTCCAGCGATTGCCACGAGTTCCGGTTGCCCCTCACACCGCTCCT
CATGTATTGACCCCGGCTCCTCTTGCATCTCCTAGATTTCACTCATTCCTCCCTCGATCG
ATGCTCTTTCTCGTTCCCCTGCCCCCATCTACTTCCATGACGAATCAAGGCAGCAACCAA
GCGGCATATGAGCCGTGATGGGGAGGCACATCTGCGAGGCTCTTCACTTTGTGAAGGAGA
TGTTGCAACCCCAGAAAGATGATGTAGACTCACCGGCGTTGCAAGACCTGTGGGAGCGTT
ACAGACGCGATGCTACCGCAAGGGCACATCAGCGAGGCTCTTCAAAAGTGAAAGAGATGT
TGCAACCCCAGAAAGATGATGTAGACTCACCGGCGTTGCAAGACCTGTGGAAGCGTTACA
GACGCGATGCTACCGCAAGGGCTCATCACCAGCGTTGCAGCAGAGATAGCCTCGGGGTGT
ACCCGGCTGTTGCAATGGCCACGCCCATCATGAGAGTTTCTACCCCAAGCTGCACGCTCT
GCTCGTTGGACCTCGCGGTGCTGCGATGCAGCACTCTAGTCGCTGCAAGGCTGATGGTCC
ACGAGCACGGGCGACGCCAGAGAGCGGCACCGATACTGAGACACATCAGTCGTTGATGTT
GTCGGTTGGGGTGGGCTCACCGGAGCTGTAATAAAGCACTCCTCAGCGGTCATGGAGCTG
CAATAAGAGCATGCTTAATAATATAGTCAACTGCTGGCTATAAGTCATTGACATGTCACC
TATAACCCATCTTATAGCTAACATATACAATAGTTGTTACAAAAATGTATTACATTTTTA
CTATATGACCCACCTTTTACTCTCACAAAATGTCTACGAGCACGTACTAGAGCTGGCTCT
TAACTAAGAGCTCGCTTGCCTTCTCTCTCCTTTTCTCTTTTCTCCAACTAAGCATAAATA
TATTATTTTATTTCTTATAGCCAGCTGACTCAGCTCTATTGTATTTGCTCTGAAGCGCAC
CTCAGCGGCCATCAAAGCTGCAATAAAGCACTCCTCGGCGACCACGAAGCCGCAATGAAG
CACACCTCAGCGGCCACCGGAGCGGCAATAAAGCACTCCTCGACGACCACGGAGCCGCAA
TGAAGCATACCTCGGCGGCCACCCGAGCTGCAATGAAGCACTCAATGCCTCCTCTCCCGC
GCGCTGATGCTGTGGATGAGGCGCAACGCCATAGGACTGCGTTGTGATGCAGGATTTGGT
GGTGGCAACCGTCCTGAAATACACGAAGGCGCGACTGGGGCACGGCAAGCTCATCCGAGT
GACGAGGGCGACGATGTTGTTGGAGTACCAATGCATTTGCGTTTGATGCCTCTGGATAAA
TAAGTGGTGGTGCGTTGACCCCATTTAACGGGCTACATACGGTCCATCGGACGGCTACCA
ACCCGGCTAATTTCTAGGGGAAATCAATCGAATGACGCGTAGCAGCCGCTTAAACATAAA
CATAGATATATAGTACTTTCTTCGTTGCTAAATATAAGTTTTTTTCGAAGTTTCATTACG
AAACTACATACGGATGTATAGAGTATAGGCATACTTTAAAGTATATATTTACTCATTTTG
CTCTGTATATAGTCTCCTAGTGAAATTTCTAAAAATACATATATTTTTAAAAAAGGAAGT
AGAAATATAGATGTCACACAAGCACAAAAAGATGATGTGACAGCTAATTAATGAAAAAAG
AGATAAATTAAATAATATAGCTAGTTACTCATATTATTGTTAGATGTGTATAGCCTCTTT
TCTGTATATCCCTATTGTATAAGAGGTTTCTTGCACTTCTATCACATGTATATGTATTGG
CCTTTGGCCCTTGTGAATGTCAGTTGCTTATCCTAACATGGTATGAGATGCTTAGATTCA
CTAGTAGAAAATGAGGCTTTCGCCCGCAGCCCCAAATCCCATTAGCCTCGGATCAAAATA
AAACTAAGACCAATGCCAGGCATTGGTACCGGTTCGAGCTGCCAGGGCCTCGCGGGACAA
TAGCCCCGGTTTGGTTCGATGCATTAGACCCGGTTCGTGCCAAAAACCGGGACTAAAGAT
CCAACGACTGACACGTGGCGTGCCGCGGAGCATTAATCCCGGTTGGTGGTTGGAAACCGG
GACTAGATGGTAGGCTATTAGATCTGGTTTTAGACAAAAACCGAGACTAAAGTTTTGCCT
ATATATATCCACCGCCCCCTCCCATTTCCTTTGTTTTTTGGCCGTGGAAGGGTGGAGGTG
TGTGCTACTCTGGTTTTGCCTACATATGTACATGAGGTGTTCGATGAAATGCTCGAGCCA
CACTTAAGCTTTCTCTTTTCCAAGCTCGACCTCCAAGCTCCATTTTCCTCCATATTTGTC
TAGGTTTGGCGGTGCAC