morexGenes - Barley RNA-seq Database

Contig contig_137303
Source Contig contig_137303
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_137303 (7674 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_137303

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_6269	2	3610 bp	AK363708	Available	Available	None
CDS Structure of MLOC_6269

Contig Sequence (7674 bp)

>contig_137303 7674 assembly3_WGSMorex_rbca.fasta
ATCTGGCACTCTTTCTTTGGCATGGCCGGATCACACAATGATATCAACGTGCTTCAACGT
TCGCCGGTGTTTGTAAGGCTTGCCAAAGGAAACAACCCGCCGGTCAAATTTAACATCAAC
GACCACAACTATAATAAAGGATACTATCTAGCTGACAGAATCTATCCACGGTGAACCACC
ATTGTGAAGACAATCTCCAACCCCGTCGGAGAGAAGAGGAAATATTTGCCCAAAAGCAAG
AGAGTGTTAGGAAGGATGTCGAGCGTGCCTTTGGTGTTCTACAATCTCGATGGGGCATAG
TTCGGTTTCGTGCTAGAACTTGGAGCACCAAGAAGTTGTGAGAAGTGATGACTCCTTGTG
TGATCACGCACAATATGATCGTAGAGGATGAGCGTCCCGAACTCTCCGCGATCAAGGGTT
TGAGTTTCAGGGTGACATGTGGTGCCTCAACATGACGGAGAAGCGGCATCGTTTGCACAG
TTCACTCAATTCCATCATGAAATGCATGATTGGGAAACTCATATTCAGTTGCAAGATGAT
TTAGTTGAGCATATGTAGAATCATGTTGGCAATCAATAAGTGTATCTTTTAAACAATTTA
ATTTTAATCGGGCTTGTTAAACTTTCCTATATTTTATTTTCAGTTATGAAACTATGCTAT
TTCATTTGTTTTTAGAAAATATGCAAAATGTTTATATTTATTGAAAACCGACGGCTAGCC
GGCCACGCACATAAATATGGGTCAGCGTGTTGGACGCACTGCCGATCCAAATCATAAATC
GAACGGACAAACAATCGATGGGCGATCCAAGCGGACGAAAAGCGAACAAAATCACCGTCC
GTTTGGGTCGGTTGGTTGAAGTTGCTAGATATTGTGTTGGAAGACCGACGTTTGAGGAAT
ACTTGAGAGGGTTCGTTTGATGGTTGCATGAAATTTGAAGCAAAAAAAAGTCGGCCGCTC
AGGATGCGTAGACGAACACGGCGTCGTGTGCTAGTGCTGACTTGAGACGGGAGGTCTTTT
CAGCGCACAGCACAGCACATCAGAGCGCAGAGACAGAAGCGTGCAGCCATGTTTGACAAT
CACAGGCAAACCCACATGCGACACCAGTGCGTCTGCTATAAATTTGGTTGGACCTCAGCG
CCCGTTTGCTTTCCCACGGCCCGTGTTGGGGTTAGGTTCCTGCTTACTGCTACCACCAGT
GGATTTGTCGTTTCGCCAGCGGAAAAAAGCAGATCAAACCCCGATTAGATGGCCAGGCTA
ATCTACAGCGGAAATACACGTCCTCCTCTAAGAACTAAGATTGTTTAGATGAGCAGAGCA
TCTACCGTCATGACAAAAATCGGTGCATGCCAGGTCAAGTATTGACTCCGGAAGACCCGT
GGGAGAAAGACAGCGCGGGAGAATACCATCATCATCACCTACTTTATCTGTTACCCGCCC
GTGCAGCGTTGCGGTGCGTGGGCATGCTTTGCTCCGCCTTTCGGCTTTCGGTAGAGGACC
GAAAGCCGCGTGTTCGTGTGCGACATCCGAAGACCTTTCTCTTCTTCCTTGCCCATCAAG
GGAGGTTTCGGTTTTGGATGGGCCTTCGATCGCTTGATCCGAATCACATGCCACGTGACT
TTCTCTGGGTCGGCAGCTTCTATACCGAGATTCTCTTTAGAAATTACCACTACCACCACA
CTTGTTTTTACTTACTTTGCGGCATAAATCTCGTGATGTCTGGCGAGGACAAGACAGATC
ACAGATCAAAATGCAGTAGCGGCCATAGGTTACTTTTCCATGTTTTTCCTAATAGTAGTA
CTCTTTAAAGATGCTTTCACCAATTCGGGGAAACTTGTGGTGCTCGTTTGGACAAAATGT
TTCAACAAAGTAGGCTTCCTTTACGCGGAGCCGTCTCTATACGTACTATTCTTGCTTTTG
CTTGTTGCTCCCTTTTCTCGTCTTGCCGATTGTTCCTCTCCCGAAAGCAACACGCCTGCT
GGTTTGGAGTGCGTGCGTGGATCCAACCACGGCCGCAGCATCTCACATCCAAGGCAACAC
GGGAAATTTCCGGTCCCCAGATGCTTTCATTAGCCGAGACGACCCGGAGAGAGAGAGAGA
GAGGATGACAGCTTGAAAATCAAACTTCTAGAAGCAACGGCACGTTGAAAGGGCACTCCA
AAATAAGAAAAAAAAATAGAGTGTACTAGGCGTACCGCGTACACATGTTTTATAAGATAA
GAGACGAGGAGTATAACTTTTCTTTTGCCATTGGCAAATTCTGGATAAATTGCCGGACGT
GCAATGCTTCAGGTTCCGCATGATCTTTATTCAATTATCAGTATTCTTTTGTCGCAGTGC
TTGGAGTATTATATTACGAAAAAGACCATTAGATTTGGCTCTACTTTACCTACACGAGGG
AGACGGACACGTGATTAATTACGTACTAGTAGTACTTGGTTAAGCAGCATCTAGTGCTGG
CCTCAAGACAAGAGGAAAAATGCTTTTTTTATAGAAAGGGAAAAGGGAAGACCACACGCC
CGGTTCCCACCAGCTGTACCCACCCGGGCCGCTCGCCGCCACGTGGGCCCAGCTCCTTGA
CGCCCCTGCGTCAGCGTCGCAGCCAGGCCAGACGGACCGCATCCATACGCTACCCCCACC
GCCCACCGCGCTCGAGCCCCCCGAGGAATCTCAATATCGCAAAACGGTCGCTCCACCTCC
AGAGCCCGCCCGCTCAAATACGAGTATAACCAACCAACTAGCACTCCTCTTTTCCCTTGT
CGTCTCCGTTACCGCTCGCACTTGCCACTCAAGCAAGTACTACCGCCCCTATTCTCTCTC
TCTCATGGCGGACTCCTCGTGCTGCCCAGCGAAACCCTAATGGCGAACCGGCGGCACCGC
CACGCCCCCCGCGCCGTAGCCTCGCCGCCACGAGCTCCCTTGGAAGGTAATCGCCAGCCC
GCGTCCTGAACCCGCAGCGGATCTTACTCACCCCATTTCCCACCGCTCGTCGGATCCGCC
GCGCTGATCTATTACCTTGCTGCAGATTGGAAGCTCTCGACCCGGCGAGGAAACTAGGAG
ACGCAACGCCTCAGGGACAGGGAGGGAGGCGCCATGGGCGATCTGAAGGAGATGAAGTAC
AGGCGGAGGATTGGGCTCGAGGAGCGCGCGCAATGCAGCGACCAGAGGGGCGTCGACTGG
GGCGTGCTCAAGCAGGACCCCGTGGAGCTGCTGCGCAAGCTGGACGAGCTGAGGGACCAA
ATCACGCGCTCCTGCCAGGTCGCCCAGCAGCCACGGGAGCACCGTCGGGTGGGCCGCCGA
CCGCCCTCCTTGCTACCCGAGCTTCCCGAGCCGGTGCCTCTACCCGGGTATCATCGCCCA
CGCTATGGTGGTGGTGCCCGGTATGGGCATGGCTTGCCGCTGAGCCCATGTGAGCCGCAC
CACTCTGATCATGGGGAGAGGTATGCGAGGCAGTCAAGTGGAAGTGGGCGGTATCGCCAG
TACCCAGGGAGGCAGTGGGACAACGGCGGGAATTACCATCAGTATGGGTGTGCTAGTCCG
CATTATCCGCATGGACAGAGGGCGGCACCACAAGAAGAGCACATACCGATGGCCAGATAC
TTCGCGGGGCAGCATGAGTGCTACCGATTTGAAAGGTCACCATCTATTTCATCAGATTAT
GACCAAAGGTCTGTGGCATCATCGCTTTACTCTCACCGCTCGGTGTCAAAGAAAAGGGCT
GAGTATTTCAGGAAGAAGGCAGAACATCTCTGCCGGCCAATGCATGGCGCGGCACCATTT
GTTGTCTGCAGCTCTTGTTATCATCTCTTGCAGGTGCCTGTGGAAAAATGCATGGGGTGG
AAGCAAAACCGGCTACAGTGTGGGTCTTGCTCTGAGATAATCAGCGTGAAGCGCATGAAA
GGAAAGGCTATTCCCTACACATCCTCACCGTCCTTCAGTTTGTCCAAAACTGAGCAAAGC
TCACATGATCGAATGAGACGAGAGTTTGAGCATCAACATCATGATGATGTCACTTCCGCG
TTTTATAATCTGAATGAGCACAGCAGCATGCAAATCAACATAGACTTTGGTGATGATAAT
TCAGTTTCTTCTACCATTAGTCATGATGAAAGGACTGACAAAGAATGTGGCTCAAACAGG
AGCATTCAGTCAAAAGCAGATGGTATCTCTCTGTCTCCACGCAGGTCTGGAGATATTGAA
AGCCCAAAGGATATATTATGTGAAAGAGATGCAGATTGTGAGGAGGAACATTCAGTAGAT
TGTCCAATCAGCCCGTGTTCCCCAATTTTAGAGGACAAACTTGTTGATCCACTGTGCAGC
CAAGAAAAACACAATTGTTCAGAGGACCTAGGTATGGATAATGGATCTGACCTTAATTGC
AAAGGAGAATACAATGTCAATGATGATGAGAGTGTCAGCATGGGAAGTGAACAAAAGGTC
AATGAAGCTGAACTTGTAGAGGAAAGCATGTGCAGAAAGCACGATCAAAAGAACAAGGAA
GATCACTGCTCTAGCCTTGAAGATGTTAGCAAAATGCAGAATAGTACAAAAGGTGACCCT
GATAGAAACGAAAAGTGTGAGTGCGCAAGCAAAAACGATGTCAGAAGCAGTCCTGAAAGT
GAAGGTACATGCAAGAAATATGACCGCAACAGCAAAGAAGATGAAACAAGCGGCCTGGAA
GTTGAGAACATAAGCAATGAGTTTGACAAGAACAACGCAGTGGACAGCAACATTGCCCTT
GAACATGCCAACACTGCCATTGAATTTGAAGGTACAAGCACAAGTGAGAGATCTGAAGAA
AACCTAATGGAACAACATAATGGAAAATTGCATGAGCCATGTGCTGAGGATGCCAATGCC
CTAACGGAGAGTGGGTCATCAGTTAATGGGCGCACAAATTCTGGTTTCTCTCGTGGTTCT
TCTGAGGCAGGGTTAGATGAAGATCAATCCTCAACTGGTAAGAGCGGGGATTCATCATTT
TTTGCTGGTTTCTTGAAGAAGGGGTTCAAGGACCTTTCTTTATTTAACCAGTCCATGGAT
AGTGTTAAGGTTTCAATCAATGGCCATCCAATCTCTGAAAGAGCTCTTAAGAAGGCAGAA
AAGAAAGCTGGTCCTGTTGAGCCTGGTTCATATTGGTAAGTATTTGCTGTAGTGCTAGCA
GCAATTGAATTGTTGAATAGTCTGCTGCACTTTTATTAGTTTGCGTTGGGTAGACTGCTT
TACTTTGTTCATTGTTAACTTTGATAAGGACAAACAAATGCTTGTCTCAATAGTCTTATA
GCAGTAAACCTGGTTTAGTGAAATTATGACAGGCAAGACATAATTATTTTTCAGTATCTC
TAGATGCTAGAGCAGAAAATGCTCTGGTGATCTATTTGGAATTCTCTTCCATGTATTTGA
GTCATATTTTTAGTTTTAGCTCTGTGTGCAGATGCACCTTTGTGCCCCTTCTTTTCTCTA
AATAATACTATTTTCAGCATTTCATATCTGATAGCTAGAAACCAAATTCGTGGTCGTGCT
TTTGGCTCAACATATGCTCCCTCCGTTCCAAAATATTTATCGTGGTTTCCACTAGAACCA
CGACAAGTATTTTGGAATGGATGGAGTACATCATAAATCACACTTCACACCTATTCCGTA
ACCCATTATTGATTTTGATGAATAAGAAAGTGAAGGCCTTGCACTGTCATATCAGTGCTG
CAAAAAAAAAGCGTTCCTCTTAAGTTTTAATCAAGAATGTATTTTTTTTTCAAACATGCT
TGATGTCAGATGCAATCATTCACAATTACACCTTTAGTGTAATGAAGGTTAAAGTATTTT
TACTTGTACCTCTTCCCAGTGCTAGGGATGGCTTGTTCCATCATCTGTTTATTTCTTCAT
AAGAAACTTAAGAAATGAAAGGCTGGGATGTCCATTGATTTCCCCTTGATTAACGAGACG
CAAATCTTTCGCGCTTTAAAAAAAACTGAAGTAATGGCAGCTAAGCTTAAATGCTTAATA
GTTAGGTAATCATGGTGATAACTAGTATGTTCCTTGCACTCGTATGAAACATGAGTCATA
ATGCTACTGTTATGATTATCATCATGCCAATTGCTGAGCTTCTTACCTTTCAACGTGCAT
GGACATAAATTATGTTTACTGTTGGATTTGTGGTGGAGTGTTACCTCCAGTTTCCCCTCA
GATTATTCACTTTTCACTTGGCTTGGGGTTTTTGTTTTTCAACGGATATTAGTGAGGCAT
GCATTATCTAACTAATTAGTTGCTTTGTCGTTAAATCATGATGCATGCTGTTGTATGATT
AAACTTTCATTTCGGAGGGATTTCTTTGAAGACAACATTGACAGTTCTGTTTGTTGTGTT
CATGGTACAGGTATGACTGCCGTGCTGGATTTTGGGGTATCATGGGTAGAGAATGTATTG
GCATTATTCCTGTAAGATCTAGTTCCTGTTCTTCTTTCTAACTAAGGATATTTCTATAAA
ATTGTGTTCTCATGGTTTCCACTTTGCAGCCATATATAAGAGAATTCAATTATCCAATGA
CCAGAAATTGTGCTGGTGGGGACACTGATGTCATTGTCAATGGCAGAGAACTTCATAAGA
GAGATTTAGATTTGCTTGTAGGAAGAGGACTTCCACGCATCTCTGGCAAATCATATTCCA
TCGAGATTTCTGGAAATGTTACCGATGAAGCAAATGGAAAGAAGCTACGCAGTCTTGGCA
AACTTGCTCCGACGTAAGTTCCTTTACATTCTGTTGCTCACGTCACAAGTTTTTGTGGCC
GTCAAATTTGTCTCCATGCTCGTTGTAGAAGTTGCTAGCGAGTCTATGACATGTGGAATA
AGAGGCTAAGAAAGTGTAGGGCACTGTAAATCATGATATTATTTGTTGAACAAATTACTT
AAAAAGATATGTGAATATACAACCCAGAGTTGTGTTGAAAACTTGAAATATATTGCCGGC
CCTTCTCCATCAGTTCAGACTTTTGTATGAACTGGCCGGAGTATTGCTTCAATTTGGTAT
CAGGGCCAATATTTTTTTTGTATTGCGCACTACATCAATCCCGTGTCTAAGGCCTGGAGG
AGCCCAGATGTGAGAGGGAGTGTTGAAATATATTGCCCATCCTTCTCCGTCAGTTGGGAT
TTTGGGATGAACATAGAGCATTATCAGTCAAAATTCATTTGTGCTCCATCATATTGTTAC
CGAGTCCATGGTACTATGTTTTTTCGATAAATAACCCCAGTAGTCAAGCCAATAGCAAAT
GTGGTAAATAACCTCTCTGGGGTCAGGAGGTAGTTTGTTTTCAAGACAAGCAGCGTTTGT
GTGGTTTCCACAGTTTCCATAACATTGCAGCCAAACATAGTTTAGCTGTAACACTTCCCC
ACCCTGCTTTCTTTAAGCCATTCCCCTACCTACCCAACTCTACTGGGAGGTGTAGGTGAA
GAAAAAGCACATTGAACAATGATCCATACAAATGTGTCCAGGGCAACTGAAGAGGAGATG
GTCAATGATTCCATCTATTGCGCAAAAAGAGCCGATCCATCCCCTCTTCCTAAGGGGTTG
TCTCTAGTTAAAATTCTCCACCGCGTAACTAACCGTAAGGAGATTTTAATTTTTAAAGGG
AGTTTCAAGCACAACAATTGTTTAAAAACTTTCTCATGGCAAACATCCTTTAGG