Contig Data
morexGenes
Links



Map Locations of contig_137298 (3421 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137298

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6265 1 289 bp None Available Available None
MLOC_6266 3 1432 bp MLOC_6266.2 Available Available LOC_Os09g02400.4, FRAME:-3, EVALUE:4e-88, 13109.m00158 protein RNA-binding region RNP-1, putative, expressed





CDS Structure of MLOC_6265






CDS Structure of MLOC_6266






Contig Sequence (3421 bp)

>contig_137298 3421 assembly3_WGSMorex_rbca.fasta
GTCGCGCGCAATGGACGGCTATTGTCAGTTGGAGGTTGATCAGATCCTGTTTCAGAGCCT
GTCGTCGTCGTTTGTCAGTTGAGATAAACCAACCTCGAGTCTCGAAATTTTCTTTTCGCA
GTCCTTAAAACGATGACATGGCAGCGTATGATGAGTAAGACGGTGCCACGCAAGCAAAAT
ACGAACGAAAACATTTGTGGTGACCGTATGTGCACATGCGGAACAAGTTTGTCAACACAA
ACAATACAGTTTCTGAATTGAGTGACCTTTTTGCACGCGACGAACGATTTTAGTGACTGT
TGTTGAATTTTACTCTTTAACTTTCCATATTTCTATGTGCATGAGCATGAGAAGCATTAG
GAGAAAGCAATGCAGCCCTAGCCGACCGGAACGTAACCAACCATCTATGCTATATTTTCT
TCCAGAAAATTAGTATGTTGCAACTCTAGGCAAGAGGAAAAAGAAAGGGAAGAAAGACTT
GGAACTATATTAGCAATTTAACATTCGGCGCCACTTTATATATGAATCAACATAGTGGCA
CTACTGTACTTGTTGTATAGAACAATATTCAACCATTTCCTTGTTGCAAAATGACCTCTG
GGTTCACTGAATCAACATAGCATCGCTGTACTTGCTGTACTTGCAATAACATAGACAGGA
TCATAACAGCATTTAGTTGCGACCAGCTTTTGGCAAATGGAGGATGGTAGTTTCCAACTT
CTAAGGACAACAGTCTACTAAATGTCTTTGGCTTCCATGAAATTAATGATACAGATATTG
CAATCTATAATTGGCTTGGCTCGGTTAGGAAAATAATAGTAATGGTACTAATGACAAACA
TGAGTAATAGGATATGCAGAACTGAGTTAGTTTAGACCGACAGAAATGCTAGACTATGTG
TGATGTTTGCGCAGCAAGATTGGAGCAGCCCACAGGAAAATGTTAGTATTAAAAGGTGTA
CTGAAAGATCCAGGCTTTTAGGGATCATTTCATGCACTAGTGCTGTCTCCACTTACACCA
GAACAGATGATTGAAAAGGCAGAAAGAAAAAAAAAACACTTGTTCTGTTTATATATCCAA
CAACCACATGGGAGTGACAGTGTGGAGATTTGATGAACAAATTACCTGTACTTTCTGTTT
GGAATGCTCTTGAATTAACTATATCAGGATCAGGCTGGAAACATGGCACTTGTAATGATG
TGTTGCCAATATTCCATAAAACCTCTGTGATAATGAGTCCATTCCTGGGATCAAGACTTC
CCACCTATTTGAATCAGGACCGGCATATATCTCAAGCTAGCCAAAAAACTGCAGACAGGA
CTACACCATGGCACAACACGCCTGATATGCGAGTTCCACATAATACACAAGACAATATCA
GGCATCATTGCATCATCTTGATGCGAGGTTAAACTGACATCATACGAAGATTACGTCATA
ATCTAAGCTGACACACTAAGTACCCACTTTTACACAGAAGATGCAGCTGGCCACAAGTAG
TGCGCAGCTGCATCAAACTAGTCGATTGTTGTCACTATCACACATTTTTACGAGTGGAAT
GGAGCAAGCTTGCACTGGGGACTGCAATCTCTGAAGCCATTTCATAGACTGTCGAAAATG
ATCAGCCGTCGAACAAGTTGACCCTATAATGGCCAGCAAGGTTCTTGATGGTCCCGTTCT
GCACGATGTTCTCAAGCATGTTGTACTTGTAGTAGTTCGCATCAAGCATTATCTGCTGCT
GAGCCGCCAGCCCCTTCTCCTCCTCCAGTATATTCTGAAGGGGAGAGAAAAAAAACTCAA
TGAACTACGGCTCAAAATACAAGTTACAACCAGGGCGCAAAGCAACTGCATTGTGTTTTA
AAGAACAGCACCATCATCAAAATCCACAACAATGTTGTGCATAATGTATGCAAGTTCCAG
TCAAATGGTGCAAGAGTGATAATGAATGGTAAAAAGATATGTTGACATCTCTGGCTGCAA
TTGCACACGCCCTATTAGGTCCTAAATTCTACATTCCAGAGCAATAGTTTGTTCCTATAA
TAAGTACAGAGAGATCAGTCATAAACCAAGTACCTCACCTTGATAAGCGCCATGTTCTCT
GCTTCCTGCCTCTTTGCGAGGCTCTTCAGCTTGTTCATCCCATCATACTCTGGATCTCCT
TGTTTCAGCCAAAGGAACTCCATCTTGGAGCCAGGCGGGCTCGGACGGTCCGGAAACATT
TCGGGCCTTGCGTAGCTGGCTCGGACAGGCCTGGGCATTCCGCCGATTATGAAGGGGAAA
TCTCGCATCAAGTCCACGGCAGACTTGGCCTGCGACTCGTCGTCCAACTCCACCAGCGCG
GCGGCGGGGATGTCGTACGGGATTGTGTAGTTCTCAATGAACTCCACACTGACGACGTTC
GCACACTGGGAGAGAGCTGCTCGGATCACCTGGCGGGTGACCACAGGGGAGAGGTGGTCG
ATGTATATCGTCCTCCTGACCCTCGCCTCGAAATCGGCACACTCCGTCTCAGCGTACTCC
CCCGTCATGCTCTCGGCATGGTCTTCGGGTGTCGCCATGGGAGCGCCGAGCCCTGCAAGG
CAGTATAACAAATTGCAACGATAATGACTTAAAACGGCTGATATTTCACTGTGGCAGCAC
GGCAAATGTTGTGCAATAGCATCTGCAGGTTCTACATTCATAATAAACAGAGCATGAAAC
TGAAAAACATAACAAGTACTGACAGTGGGAGGGTTGCCTATCGCCTGAATCGAGTCCTGA
GGTAGGAAAATCGGGGGAACTAGGGTTTTAAGGTACCTCGTCGCGAGGTGAGCTGCGGCT
GCCCCGGGGGAGCCGGGGGAGTGAAACCAGGGGCGGTTCTAGATCGGAGAACGCGAAGAT
CCGTCGGATTCAGCTGAGGGGATGGCCATGGCGGGAGGAAAAACAGCGTCGTACCTCGAA
ATCTGGAGATTGCGTTCGGGCGGAGACGGCAGGGGCGCCGCGAGGAAGGATGGCGGCGAC
GTGGGTGGAGGGTTGGGGGAGAGAAGCGGCGATGGCGGCGACGCAGCGTCGGCGGTGGCC
GCCTTGGGCAGAACGGAGGCTCGCAGCTCAGGCGAGGAAGAGGAAATGGTGGTACGGGAA
CGGGACGGTTGGGGGTGCGAACGTTAGGTAGGAAACTAGTAAAGGTGTAAAAAAATATGC
TTAGACACTTGAAAAAAACTACCACTAAAACAACATTGCAATCAGTCAAACAGCCATATA
AAAATAAATTTTTCAAATAATTTTGGTTTAAAATAATTTTTCAGTTCCTACATCCAATAT
CATTATCAGAAAACAAACTAATAAGTAAACATGGATATGCTCTTTCTTGATTTTCCACAT
GGCAAGTTGAACTTTCTTGATTTTCCACATGGCAAGTTGAAACACTTTTTGTTGTCAAAA
T