morexGenes - Barley RNA-seq Database

Contig contig_137268
Source Contig contig_137268
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_137268 (8163 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_137268

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_6248	1	415 bp	MLOC_6248.1	Available	Available	None
CDS Structure of MLOC_6248

Contig Sequence (8163 bp)

>contig_137268 8163 assembly3_WGSMorex_rbca.fasta
ATAGAGAGTTTGTTCCTATTATATACACAAGGAAATGATGCTTCCGTGCACTGGAAGAAT
GCTTCTGTGGTATGCAATCATGTTGCCATCTACAGAGAAACACATCTTAAAAATATCATA
AATAGTTGCCGAATATGATTGTGACAAACAATTGTACTTTTCTAAATTATTTCCTCATAA
AATGGGATTTGACATCATTCCGAAAATGATGCTTCAATGCATCAAGAAGAATGGTTCCAT
TGCATAAAAATTATCGTACGATCAGTAAAAAATACATCTAAAAATTATCATAATTAACTG
CCAGATTTTGTTGTGAGAAATAATCATACTTCCAAAATTATTAATCAGTTTTAGGAAGCA
AATCAAAAAAAATAAGAAGCAACTATCTTGTTTAGGAAGCATTGGTCCTCACGAATGGAA
ACAAATAAGATAGCTAGTTAACCATCCCTAGATTTGGGGAGAAATTATTGGGAAAAAATA
GAAAGAAATAATAATCACAATTAATGCCAAATCCTGCATGCAAACTGACTCACGCATGCA
GTTCTGCTAAAGAATCGGACGATGAGCATGCTTCCAATCCAATGGCCACAAACTAGTCTG
ATAGGTAGCAAATGACAGTAGACTGATTCCTAGAGCTGTCCCTGCCTTGAGAGAGTAAAA
TTCTGTCTCCTGAATCATACTTTCCACCGGGCCAAAAACATTGTGTGCAATTTTGGCCCG
AAGTTCGTAAAAAACTACGTACTCAAGGTACCCATTTTTATGCATGATATTATGGAAAGT
AATTCATGTTTTGGTCAAAGCTTGGTTAGCAAGAGTTATCCACATACTACTATATGCGGT
ATTGATCTACAAAAGTTAATGCATTTAATAATTTTAGCATATAATATAAGGAAAACAATT
AATGCATTCAATCATGGATCCTCTTTATAAACTCATACCATCAAGGCTCAAGAGTAAACA
TTGCAGCAACACCATCTAGATCCAGATCAGCAAGAAGCTCCAGCATCACCTCATGGCAAT
CCTCACCAAGATTTCTAGGGCCATGTGCCTCACAGCACTAGTGCTCATGGCCACCGTTCT
CTCCTTACGCGCCGATTCTCATTACCCCTACCCCGGTCATGGTTCGTTTTTGTTCATCAA
TGATATTATTTCTAATCAGCAAAATCCAGTTTTACGTTGCGCATTTTGTGATTATCGGAG
GATATTAGTATTACCGTGTCACTATTTCTGGATATGTCAAGTTACTTGATGAATTTTCTT
GCAATTAACCCATACCGGTGCAAATGATTCTCAGGATGCGGCGACCCGTTTCCGTCGGAA
AACTGTGATAAAGATTGTTATAAAAAATGCTATGGCGTTTGCTACATAGGAGATGACCAG
AAGTATTACTGTTGCTGTGAACCATTACATAGAGATGGGTCCATGAGGCCTTAGGACGTA
GTTGAAATGATACAAACATAACAGTGTGGAATAAATGTGCTTGCTCTTGATGTTGATGTA
GTTATTACGGGCCTAATATAAACATGTAGCATCCTCTTTGAAGAAACAGATAATGAATTA
TCTTTGTCAATCTATTGTTGTGTTTGTCTTTTCTCTTTAGTATATAGGCATGTCTAGGAT
GGCCTGGTTATAGCACTTCTAAGTGACTACTTAATCAAATATGAAAAAGAAAATAAGAAG
ATACCCTCACAAATCTTTGTGTAAAATCAATTACTCCAACGGTGCGATACTTAGAACACA
TCTAGAGGTCCAACGGTGTTCCAGGAGGACCTACTGGCGGCCGTGAACCAGTCCTTCTAG
CAGCTCGTTCTGAAAGACTACGTCCAAGAGGTCACCGAGGAACCGGAGAAGTGCCTAGTC
ATTCATGCATTGGGCTAGTCCCTTGCCGAGTTCGCCCGCCATCGGACTAACCACCGTTGG
GCAGCCGAAGCCGTATATGGCCACGCCAGAGCTTCATAGGGACGCGTCCACCGGATGTCT
GCATCGGTCACTAGTAGGGTACGCCGCGGAAGGTACAATAAGCGATTACTTTGCATTTTT
TGAGAAAAAATCATTTTAAATCCTGAATTTGTAGAGGTTCGGCGAAATAAAACTTCAACT
CGAAATCCTTATCGATTACACCCTTAATTATGTAATCCCGGTTTAAAAAAAAACCTGGAT
TCGTTTACAAACCGGGATTGTTGATTTGACCGGGATTGAGCTGCGCTGCGAAGGGCACGC
GCGGAAAAGACTGGGCCAGCCCAGTCAGGCCCATCTCGCTCTCGGACTTCACAATATTTG
CGAAAATAAAAAAAGTTCACGAATTTTGAGGAAATAATCATGCATTTAGAAAATAAAAAA
AGTTCACAGAATTTTGAGGAAATAATCATGTATTTTGAAAACAAGTAAATGGATTTTCAA
AATTAAAATTCAGGGATTTTCAAAAACATTGTGAATTATATAGGTTATTTTATATGTAGG
AAGCACCTCAAAATGGTTTTTAACATATGATTAACATTCTTTTTTAGAATACATGTATTT
AAAAAACTATCATATACATTTTTTAAATGCCCCCAACATTTTATTGAATGTGTGAACATT
TTCGAAATGCAACAATTTTAAAATTAGACACATGTATATGTTATAATATTTAAATATATT
TTAAAATGCCACATACTATTTTTATAATATTTAAATATATTTTAAACTGCCACACGGAAA
ATGAATATTAAAAGAAGAAGGAAAGAAAAGTTAACTACTACTCTCTGCTTTTTTTATTGG
AAGCTAACTGAGATGACGTTGTATGGCCGCCGGCAGCGGCGACTGCACACTTACAAAGCC
TTCATGCTCGACGACACCATCGACTACCTCAAGCACCTCCAGCTCCAAGTGCATCTCAGC
AAAATACCGCTCTGCTCAATTTTTCTCAACAGAAAAGTTTTTGCTGCATCACTACTGTTT
CTCTGAATATTCCATGACGGGGACGACGGCGCGGGCGGAAGGCCGTTCTCCTTATAGCAG
GTCGGCGTTGAACCGCGGCGATAGGTCGTTCGTTGATGGAACTATACACATGCATGCATG
TGTGGTCTAAATTTTCTCATTGCAGCAGCTTTGGACATCACGCGCGTGTACTAATTTACG
TGCGTGAAAAGTCCACGAATTTAAAAAATAGAAAATAAAATTTAAAAAGTTCACAAAATT
TCAATAAAAAGTAAATCACGAATTCAGGAAAAGTTCAATTAAAGTGAATTTTTTTAGGGA
TTTTCAAATGAGAAGTCCATGGATTTTGAAAACACAAATTGCGGATTTTGGAAAAACAAC
TGATAAATTGAATAAGATTTCATGAAATAGAAAATATTTCAGGGATTCAAAAAGGTCCAT
GAGTTTGTAAAAAGATTCATGAATTTTAAAAAGAGTTTGAATCACCTTGCACTTATTTTT
TAGGAGTGTAACCGAAAAAGTAAACAAAATGGGTCGACCCAACGCGCTCCCTAGCCCATC
AGTCAGCCAAATCTCGGTTGACGTTTCTTCTGTCAGCATTTTTGTGTTTCAGGGTCCGAT
TTATACTGGATTATATAGTTTAGGGTGCAAGCGACAGGGATTTGGACTTGATGGTTAGAT
TCGCCAAACCTCTATGAGTTCAGGGTTTAAAATGGGCTTTTTCCCATTTTTTGAAAGGCC
GACAGCCACTGTGGGGGTGACACCGTGTTGCCGCATTGACCGGACTACGGGCTCCGGCAA
ACAGTTACTCAAGGATTGGTGAGGTTACAGGAGGAGCTGGCGACCTGGGACGTAGCACCC
TTGTCCATGAACCATTCGAAGCTGGTGCGGTGGCGGCTGCATCTGGTGGTTGAAATGTGT
CGTCACGGCCTACTGCCGGCCCGAGGTTGATGCAGATGGAGGCGGGCCGGCTGCCACCGG
GTAGGCCTGGCTGGTCAGGAGCAGCGGGGCGAGGGCCGAGGACGCCGTCCGAGTTGGCCG
GAACCCATGGCGAGCGCCACTGCTGCGGCATCGGAGCTGGCGGGCCCCACGGGGCAAAAT
TGCGCAGCCAAGGTTGTTGGCCGTTGTTGACGCATCCGGGGGTGGAGCTCGATGAGGCAC
CCGGGGAGTCGCGGCCACGTCCACGGCCATAGTCGTGCCCACCGTGATGGCGGTCACCGT
CGATGGGGCTCTTGCCCTTGTCCTGCGGCAATGATGGAGGCTCGCGATCGGTGGAGGGCG
AGCTATCAGAAGAGGAACCGCCCGCTTGGGCGATGGTGAGGGCGGAAGCCCCAACGTCAT
CCTCCCGCTCGGTGATGCCGATCTCCTCCAACAGTAGACGAGAGCGGGCCTGCACAAAGG
TAGGGAACGGGTGGTGCATCGGAAGCAGGGTAGCCATGACGTGGAACCGCGTGCTCAGGC
CGCAGACGAGCTGGAGCGTGAGGGAGTAGTCAGAGACCGACTCGCCCACGTTGGCCATGG
CGTTGGCCAACTGCTGAAGGCAGCGGCAGTACTGGGCCACCATCATCCCCCCTGAGCCGT
CATTTGGAGTAGTTGTTGTCGTAGAGTTCGTCGAATATAGTGCCATATATCCAAAGAACA
ATTGTGATACCATCATTGCGCCACACCAGATCTTCATGGAGTGGATCCGCCTCCTCGAGT
ACGTGCTCCTCGACGTGGAACTTGCACAGGACGAACCAAAAGAGATGGCGCCATTTGGAG
TCGTTGCTGTCGTCCATGCTCAGCTTGAAGGGGATGAAGGAGGAGATATTAATGTGGTGC
ATCGAAGGAACCGGGATCATGGGAACCTGGAGGGGCGGAGGAGCAATGGCGAGCGCATCG
GCGGTTGGGCGCACGACACGAAGAGGAGGCACCGTTGGGACAACACCGCGGCGGAGGACC
CGAGCATCGGGGGAGGCGGGCATTGGCGCAACTGGCTCGGTGGCCGGTGTGGCAGGCTAG
GGGCCGGGGGTTACAGGCGGGAGGACGAAGGGCACGTCGGCGTCCCCGGGGGAGAGAGTG
CGGCGGAGCGGGTGTTGGAAGCTCATGGCGGAAGCGAGGAGAGGAACGAGCGACGTCTGA
TACCAAGTTAGACAGGAGAATGTGTGTCTATGTTCATTGATCATATACTTAGTGCTTAAA
TACATGCAGGAGGTATAGCAGATAAGATCAGTTACAACAGAATCGGGAGAGAAGGAAGGG
ATCACGACGTGGCTGGAGTCGTGGGCGTGCATGCAGTAGTGGGCACCGTGCCTCCCGAAC
GATTCGGGCCAGACTGTTGTCCTCCTCACAACGGAGGCCTAGTGTCCGATGTGACGGTCT
TCCAACAGTTTGGACTTCGGATTGTTATAAAGTTTCACTTTACATCAATTCTTGTTGAAC
ATAACATATTATGACAACTCTTACGAACAAATGTTTAATTTAGATAATCAATATGTCGAA
GAAATATCTAAAGTTACGTGCGTTGCACGTGCACATTTGCCAGTCACACCAACAAAAAGA
GTATTGTCTCAAAAAAAAAACATGACCCACACGAGCCCTCTATTCCCGATCTGATTGAAC
CAGGAAGTAGCGTGTTTCCTGGGAGCTAGAGGATATACTCGGATACGCGTATTGGTGAGC
ATCACGGATATGGCCAGATTCTAGCACTGATCGATCTCCAACTATCCTGGAACTGCCGGG
GGCTTGGGAACCCTCGGACAGTTCGTGAACTTCACAAGATTGTGAAGCAAGAAGGGCCCG
CCCTGCTCTTTTTTATGGAGACAAAGATCAGGGGGAGGAGAGTGGAGGACCTAAAAGCTA
CTTTGGGTTTCTCAGGTTGTTTTGCCGTCAATAGCGACGGGCTTAGCGGTGGCCTGGGGC
TCTTTTGGTCAAGAGACGTCACAGTTTCACTACAGAATTATAGCTCTTCCCATATTGATG
TCAGTGTTCAACAAGGAAGCAAAACTTGGCGATTCACTGGTTTTTATGGCGAACCTCGGA
CAGAAAACAGACACCACAGCTGGCGTTTTTTGCGCACTTTGTTTGCTGTACCCCATCAAG
CATGGATTTGTTGCGGAGATTTTAATGAAATATTGTAGGGGGACGAGCAGTTTGGAGTTA
ATCTCCGATCGGAGGCACAAATGCGATCCTTCAGGGATGTAATTGCCGATTGTGCACTCC
AAGAGGTGGGGTGGCATGGTGTTCCCTTCACATGGGATAACAAACAACAAGGCACAAGGA
ATGTCAAAGCACGCTTAGATCGAGCCTTTGTCAACCAGCAATTTTTGCAGGTGTTTCAGT
TCCCAAAGGTTAAGCACATTGTTAGTGTAGAATCAGATCATTGCTTTGTGCTAGCAGAAC
TAAAAGATTCGGAGTCGTGCAGCTTCCAGGCGCCACGACAGTTCCGATATGAGAATGTTT
GGCAGTCCCACCCTGATTATGATGACATGGTTGGCCGGATTTGGCGTACGGGTTCGGGCC
AGCAGGGTCTGGGGGGGCTGCTCGAAGCACTGACAACAGTACAGACACATCTTGGCTCAT
GGGGGAAGAGAGAATTTGGGAATATGGCGAAGAAAGTTCGCAAGCTCCAGCAACGTCTCG
AAAGACTCCGACATGCCTCACTGGGACGTGGTCCGACAGTGGAGGAGAAAGCAGTGGCAG
AACAATTGCGAAAGGCCCTTCGACAGGAAGAGGTCTGGATCAAGCAGCGATCTCGCGTTA
CTTGGCTGAAGGAGGGTGACAGGAATACGAGCTACTTTCAAGCTCAGGCGGCTCATCGGA
AGCGAATCAATCGTATATCCTCCTTGCAGCGTAGCGATGGGCAGCTCTGTACTGACCCGA
TAGAAATAAAGCAGGAGATCTTTGCTTTTTACCAAGGATTGTACCAGTCCCAAGGGTTTA
ACCAAATGGATGATCTGCTGAATTGTGTTCAGTCCCGCGTGTCGGAGGCAATGAACTTTG
ATCTTGAGAAGGTTTTTGTGGCACAGGATGTTCGCAATGCCCTTTTCAATATGGCCCCAT
CAAAATTGCCGGGGTGGAAGGATTTACGGTTGGCTTCTTCCACCGACACTGGAATGTCGT
GGGTGCAGATGTGACAGCGGCAGTTCTTGGTCTCCTTAATGGAGATGAAATGCCAGCGGG
ACTAAATGATACGGCAATCACATTGATCCCAAAGGTAACACACCCTCAGAAAATTTCCCA
ATACAGACCAATTTCTCTTTGCCCAGTGCTTTACAAGATTGCCTCCAAGGCAATTGCAAA
TAGAGTGCGTGGGATCCTGGACGAAGTGATAAGTGAAGAACAAAGCGATTTTGTCCCAGG
TCGTTTAATCACGGACAATATTCTTGTTGCTTACCAAACGATACATGCAATCAGACGTCG
GAAACGTGGCAACAACCCCTGTTGTGCCATCAAGCTTGATATGCTCAAAGCGTATGATCG
GGTGGAATGGCATTATCTCGAGGCAATGTTAACTAAATTAGGCTTCGGAGATTAGTTTGT
TAGACTCATTATGAAATGTGTCACCTCGGTAAGGTTTACTATTAAGGTAAATGGCGAGCT
CCTGCCCTACTTCAGTCCAACAAGAGGTTTACGGCAAGGATGCCTCCTGTCAACGTACCT
TTTTCTCATCTGTGCCCAGGGGCTCTCCGCGTTGCTGAACTATTATACAGGAGCACCTTT
GAACAGAGGCATCAGGGTTAGTATTCATGCACCTTGGGTTAATCACTTTCTTTTTGCTGA
TGATAGTTTGATCTTCCTAAAAGAAAACATCCAGAGTGCTGCAAGGCTTAATGAGATTCT
CCGTATCTACGTTGGCTGCTCGGGTCAAGCCGTCAATAAGGAGAAGAGCTCGATTTATTT
CAGTGCAAATACAGCACATATGCTTCGCGAGGATCTCAAGCTTGAACTAGGGATCAATGT
GGAAGCCTTTTCGGAAAGATACCTTGGACTGCCCACGGCAATCGGCAAGATAACGAGCGG
GACTTTCATGCACATCAACGAACGTATACGTGGCAAGGTCCGGGGATGGTCTGAACGCAA
TCTTGCTTGTGCGGGACGAGAGGTGTTGTTAAAATCCATCGCCCAAGCAATCCCGACTTT
TAGTATGAGCTGTTTTCAACTTACTAAACAGGTGTGCACGGGGATCACTTCGTGTATGGC
CAAATATTGGTGGGCAAGCTCTGTTGATAAGAGATCGCTGCACTGGCTCTCGTGGGATAA
ACT