Map Locations of contig_137260 (9273 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_137260

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6241 1 381 bp None Available Available None
MLOC_6242 4 2444 bp AK356613 Available Available None





CDS Structure of MLOC_6241






CDS Structure of MLOC_6242






Contig Sequence (9273 bp)

>contig_137260 9273 assembly3_WGSMorex_rbca.fasta
TCAATCTATCCTTACTTTACCCAGGAGGGATTGACAACCCCTCCATGCGTTGGGTTNNNN
NNNNNNNNNNNNNNTGTGTAGGTGTTGCTTACATAGTCTTATGAATCTTCCTACTGAATT
GATATCTTGATTTCATAACTGAGGGAAATGTTTTTCGTCGATGTGCTACATCATCCTTTA
AGCTTGGAAGGAAACCAACGCAATCAGCGAGGAGTCAATATCTTGTTGGTATCTATTCAA
AATCCATGAAATATCTTCCGATGGAAAATTTCCTCATATGGAACTTCAAGAAACTGCTAG
TTTATAGAATTTATCATTCATTACCAAACCCCAAAGCATATCATTAGCCAGGTGGCATTA
ATCCTCGAATTTACCCAACAATCTTCATGAAATCATTAGTACACGAGGGTTTCCATTGAT
TATGAAACCACACATGTGGGAAACATGCACTTTCAATATGCCCCGCTTTATTAATTGATT
GCCATCCCAATAAGAGAATTTATATAACAAAACTAAATCAAGTATGAATTTTGTCTGAGA
ATAAATTGTATACTTGAGGTGGTTTTGATAGCATCAAATATCACAAAGATACTTGATGTT
ATCAAAACCGAATGTACAAGTATCGAAAAATTACAAACACATTTGGAGTTTTCTCTATAT
ATGCTTCTATGCCACAAGCATCTAAAACATAGGTATATTCATGAATGACAACAACCACTT
CTAGAACTTCTCCCTCATGGGCATCAATTGTTAAAATGGAAGATAAAGTACAATGCCTAT
ATTAGTACGAGTTCGTAACATTTGGGAGAAAAATATGAGTTCCTCCCAAATTTGTGCATT
TCTCAAAATGTGAGTGGAATCAAATGCACATATCCAATTACAAACAATCGGAAGAGTTCA
CACTATATTCAGGACTTGTAAAATGGAACAAAACAAGATGATATGACAATAAGCATTAAA
CATGTGAATCATGCATTCAAAAGATCAAAAAAACAAATTTTGGACAAGGCATAAATAGGT
ATATCCAGTAAGATCATCATTTTAAGCATGAGTCCAAAATACATTCCAAACACATGTGTG
TGCAAATATATATATGCACATGCAAGCACTTGTAAGTGATAGCATACCCTCTTACAGGAT
CTATAAAAAAAGAAACTAATCAACTGGCCGGCAAGGAATAAGGTTATCAATAAAATAAAA
GCACTTTCTCACGTGTGTAAGTTTCTAAGTGGAAAATATTCATCACAATTTGCATCCACA
AAGAAGCTCGCGGACGTAAGCTAGTTGATGGAGATAAGAACATGATATCCATGAGTGAAT
CCAAAGTTAGACACATGGTACAAAATGGTCTAATTTGTATAACAAAATGGTCATTGTTCA
TACTTTTTGAACTTTTTGTGTGTTTTTGAAGGAAGTCAACGAGATTTTTTTTGTGGGATT
TTTTACCAGTGCAATGGAATGTCAAGTTTATTTCAAAAATATATTTAGAATTTATTGACT
TTTTATTTAATTACTAGATTGTTTCATATAGGGTGTATATACACCCATAGAACAAAAGTT
CCCCTGCATATGACGAGCCACATGTTTAGCTATATCGAGGTTTAAAGCTAATACAAAAAA
CACAACTTTCCCAAGTACTTTTCATGTCAGGAGGCAACTCGCCAGATTAATATGTAGTCG
AACTGCGCCATAGATGACACGTGAGCCGACATCCCCTCACATATCTTAATTTATTTTGGA
AATTTCAATATACTTGTGATGGGATCATGTTGGTGTACATGCTATTCTTCTTCCTCCACT
CATCTCTGTTCTCGCTTAATTGCAGCACCACCATGGAATGCATGTTCCATCAATACAGAT
GAAACTTTCAGCATGCCAAATATGAAAAGGTAATCTGCTTTGACCACATCGTCTGCTCAG
ATGTGATGGTGAACGGTCAAACTTATGCCACATCACACGAATATAACCTCCCCAGTGACA
AGTATTGACCTAAACACCTTAACGACCTGTATTTCGAGAACATTGGTATTCAGTGACAAA
ATTGAACATACACCTCGAGTAGAATGACCACGGATGTATGTATTACACTCTTTCAGTTTC
ATCCAACAGGCAAGCACGGACGCTGCCTTGGCCTGCTTGCGTTGCTGGCGATGGCGAGGG
GACCGTCGAGAGAAGACTTCACTTCTTCTCCGCTGCTTTACGGTCTGGAATCTTCAGTAT
GCCACTGTCGATGAGCGGCTGCACCTCGGATCTCGCAAGATCCTTCACCTTGGAATCCGG
AGATTCCAGATAGGCAGCCACCACCTTGGAGCTGACAAACAAGTTCAACAGAGCATCAGC
GCATGATTCCTTTCTTTTTCATCCTTCAAAATACCACCTCAGCAGTGCAATGTAGTATAT
AAATTGCAACAAATAGTTGAAATTTTATTCATTGCATTTGCATGGTCCACAAATATTATG
AACTGAGATATCGATGAGGAATCATTTTGAGGTACCTGAATCCATCTGCATACAACTTGC
ACTTCCCTTCGAGGGCATTTTTCCACAGGGTAGCGGCAAATGCAGGGCAATCAAGTATCA
TCTTTCTGATTACGCGGCTCGAGTGGTAGTTATCAAAGGCGTGCTCAACATCTTCTGTCC
TTGGGCGTGCTGCATCAGAAGCTATAGCATTGTGAAGCACGTGGATCCTGTCGGTGACCC
CCTCCAAAACATTATTTTTTCCACCTGTAGCAACCTTGGAAAATGGCAATGCAGAATCTC
AGTAGGTGCAATCATGACGCTCTTCAATAGTCCATTACTCATCTGTATCAAGAGTCAGAA
CAAGACAACAGTAGGTGTAGACTGGAGTGTTGTTTTCTTTTGCAGGAGGTTGATTCATCA
TTAAAGAAAAGTGAATAGCAGTAATACTAAGCATGGGCACAAGGACTAACACATCCCAGA
GAAAAGGTTGCATCAACTTATAAGAATATTTTCACATTGTCAAATAATAATCAGGAACAA
TGCTTGGCTCTTGTGAAGGTCATGCAAGTAAAAGCATATTTATCATAAGTAACTCCTTTC
AAGAAGAAATAGCACAGATGAATGAATATTATCCCAAGATACTGGCTATACAGGTAGAAG
CATGGAGAATGGACCAAGGAGATTACCTCATACAATAAATCTTTGCCAAAGTTTGTTCTA
AGTAACTCTCCAACATTTTCAATGCAAGTCTCAATGAGAACCTGCAAAGAAAAAAGAACA
CCTACATTATTGCTTGGATTAGGGGTACGTGGCTATGGGAGCATAGTGATGTCGGGATCA
GGGTGTTATGTGACTAATGGGGGCCATAGTAATGTTGCGACTAGGTTTTCTTTGACAAAT
GGTCACCTTTAAATCATAGTACTCCCTCCGTCCGGAAATACTTGTCCTAAAAATGAATAT
ATTTGATGTATCTATAATTAAAATAAGTCTAGATTCATTCATTTCTAGGACAAGTATTTC
CGGACGGAGGGAGTACTAAACTACTGCAAGAATAAATGTAGATCTCTTGAGGTGGGGAAA
CTACATACTCCAAAAGAAATGCCATTGAATAAATAAATAAAAAGTTTAATACATGTTACA
AGTATCACCTCACAAAGCTCGCTTTTCACCAACAGTTCTTGCCGTCGTTTAAACGGGTCC
TTCTTGCTATCAGATGCAACCAGTGTGTCTTCTGAACCCCCATGTTCTTTGTCAGCTACA
TCATCCAGCTTACTATCCAAGTTAACATTAATAGCACTCTCTGATGCCTCATCCTGAAAC
AAAAGAACCAAAATTCTATGGGCCTGTCTCTCTTCAAAGCACTTAACAATTAATAGAGTA
GGTCACTTGCCTTTGAAATAAGGGAAGGCACACGGTAGTTCAGACAAATCAAATCAGTCG
GAGTCAGATAACGTGAGCAAAGTGGGTGAAGTAGCTGCAGCAATGGGCGTCTCCCGTTCT
GTTCCAGCAAGGAGATCCATCATAAATAGCCTCATATGCTTATAACTAACAAATAAAAAC
AAGCATATCAGAAGCTTGTTATTCCTTTTACCTTATCAAATATGATTTCCTTTAACTGCT
TTGACAGCTCTTCAATTACAACCTACAGATATTGAAAGTAAGCTATAAGCATCGTCTCTT
CAGATTGCTTGTAATGGCAGCATAACACTTGCTTCAAGCAAACAATTGGTGGTGGCTAAC
CTTAGTAACAAGTTTTGTGTCATCAACAATGGAGAGAAGACAAGCAAGGAACTGGAGAAA
AAAAGACAGGTTAGTTTAGTTGATGATTAATTAATTGGAAGCATAAAACCATCTGAAATT
ACAGTATATTTGGGAGAATGTTTTTTAAAGTTAAAGCATAAATTCACACAGTAGCATCCT
GTTTAAACACTAAAATATATTACATATATAGACATCACTTACAAGGCATCCATAATCACT
GAGAGCAAGCTTCATAACCTGCCCCTTCAAGCTTTTGATAATTTTCTTCCTATCCTGAAA
TGCATTACCATGTTAAACAAGAATGAAAAGAAATACTGCTGAATATGCAGCGTGTGGCAC
TAACAAATGCATGGTTTAATTTGCGTGACTATTTAGTGTCTCTGAAATCTATAGAAGTTA
ATAAATAAACATTGGATAAAGCAGATGAGTGGGCAAAGTTATACCAAGTGATCGCTCTGA
AATCTGTCCTTTTTAGATACAAATAAGAAAGCAGAAAGAGCGACAAAAAAGACAATGTAC
CTTCGCACTGCCATGTTTGAGGCAAGCAAGCCCTAATTTCAATCCTTCCCTCGTCTGCAT
GATCCGAATGAGAAGTGGTTCTGAAGATCTTTTCTTCTTAGCTTTTGATTTCGTTGGTAC
TTCAGCGACACCTGATAGTTCCTCTCCATCTACGACAGATGACCCTTGAGTAAGATGGGG
GGTTAACTGACGAATCACGTCCGAGGCTGATGTCTACAAAACACATGCATATATTAGATA
ATGCGATAAGATGAGAAACATTTCAACAAAAAAGGAGAGCTTTGTTATGAAGATAGGTCA
ACTGCATCAATATAATACATTTACCTTATCCGCAATTGTTAAGTACTCCAATATGACCGT
GTGTACTATGGAATACTCAACAATACCCTTTTCCAAAACTGGCTGGATAACAGTAGTCAT
ATACTGCAGGACAGATGATTTCTGTAGTCCAAGCTTGGAAATTGTTTCTAACAAACTGAA
AAAGAAAGTTGAATTTTAGGATACTTAACTAAATAAATAACTGCAGCCACCTATGGCAGG
CTAAGTGGGTGACTACAAAAATATTTCCCTCCACCCAAGTTAAGGTTTTGTACAGAGAAG
TAACAAAAGCTAAGGGAAAACTTCAACGCAGATGTATGACAAAACATTACAGCGTGCCAA
CCTGCATGATTTTTGTTCAGTCAGGTCCTTGAACAGCTGAAGCTCGGTGGAGTACAATTC
CAACAACAAACTTCTTTTCTGAGGCGGTGTCGCCTGATGGAAGGCACAATCAATGACTGC
AAGAAAGAATGCATGTCAATGTGAGATAACCATGTACTGTACCCCTTTACTTGTATAGCA
AATAGAAACACATGCGTACAATGGCATTCAGCCATTAACTCCTGGTGCTCCTATACATGA
TGAGTTCCTACCCCTTATATGACAATAACACATAGCAACACATACCTGCAGCTCCTATTG
TGTGACGAAGTAGAGAAGCGACATGACCATGAAGGGAAGAGATGAACAAGGCAAGCTGTT
TTTTAGTGGCTGCAGTCACAAACAAGAGGTATATTAGTGAAGCTAAGGGTTATCAAACAA
ACGAGCAACATTCACACATACGAACCCATACGAGTTTTTTGAGAATCGTAGAGAAATTTA
CCAAGTTTTATGAGCTTTTTCACAAGAAAAACAGCGTATTTCTTGCGAGAGAGATGGAGC
AAATGTGGCTGCAGGGCAGCAAAAACAGCATCCCTCTCTGACTGTGAGCACCACTTGACA
CATGTCTGAAAAAAGAATGGTGGCTATCAGAATAAGGACCAAAACACCATAAGCAGTGGG
TTCGTAAAGACTGAATATCGTCAGCTTACTTGAAGAACACGTGCGGTTACATGGGATCCA
GCAATTTCGAAATATTTGCCATCCATTTTACGGAGAGCCTCAGTTACTAGCCTGTGGAGA
TGACAAACGCATCGGCATAAGAAGTTGAACATAAGTTGCAGCTCACAAGACTTTAATAGT
GACACATACTTGGATCTATTCTCCTTGCTCACATCACGGCATCTCATCTTTTCCCAAAGT
ACTGCCAGTTCCTGTCGAAATTATGTGTTGACGGCACACCAAATTAGAGTTGGCCAGAGT
GTGGTTAACTTAACCATCATAAACAGAGGAGACGGTTCAAGCAGGCACTGGTACTATACG
TTACTGGGATCAAAGCCAGTTTTTGCTTCACCGTAAAAAAAAAATGAAGTAATGCTACCA
CCAGAACTCAAGCCCAATCCAAAACTAAAAACCATAATATAACAGAGGTGACGGTTGAAG
CAGGCACTGCTACTGACTATGAATGGGATCAAAGCCAGCTTTTGCTTCATTGTCAAAAGT
TAAGTGATGCACCAGAATTCAAGTCCAAAACTAAAAATCCAGAAGATGTACTACTCAGAG
GTGGGTATATTACTTTGGTTTTAGGATGCAAGCATGATTAGATGAATTGATTGTATATGC
AGCGAGTGCAATCTGAAGGTTCAACATACAACTATACAAGGGTTGGTAGTGGAGTTGCGC
ATCCGTAATCAGAGCAGACGGCAGGGAAATTAAAAAAAAAAACTACCTTCTCGAGGTTGT
AATTGGGCTTCCTCTTCATCTTCCTCGACTCGGACATTTCCTGGCACAATGGACACCGTT
CCACGGCTTCAGCACAAGCACGGGCAGGAGCAAATCGCAAGCTCTCCAAACGAATCACCG
GAGGAAAGGAGCGCCGATGGAATGAATACCTTGGCTGCGACCCGCTTGTCCTTGGCGGTG
ACGGGCTGCGGCTTGGCGGAGGGGGCGGGGGGGTCATAGGTCTTCTTCCGCTTGGTGGCG
TCGGCGGCGCCCTTGGACGGCGCCTTGGGCCTCCCCGCGGCCTCGCGCTTCCGCTTGTTG
GCGCCCGGGTGGTCGCCGCCGCCGGCCATGGCGAGGTCGAGGTCGAGGTGTCGGCGAACG
AGGGTTTACAAGCGGCGGAGGACGTTGCCCGGACCCGGATGGGTTTCGTTCTAGTCTAGG
CTAGGGTTTATCTATCGCACGAGTGTTGGGCCTGTGGGCCGTCGCGCAGTTTTTTTTTAG
TGCGCGCGACATTTCCAATCGGCCCACGCAGTCCAACTTCGGCGACGTCTTCCAGACGCT
CGGCCCACGGGCCCGCGTCTGACCGGTCAAAGCGCGCGAGGGCAGCTTGGTCAATGCACC
TTGCGGTGTGCCGAGCGCGCGCGAGGATTTTCACTTTTTCCCGCCGCGGAGCGCGCCAAC
CAAGTGTAAGCCTGCAAGGGCAATCAAACGCGCCTTCCTTTCAGAATAAACAGACATAAA
CAACAGTCCAACACGTAGAATTAAACAGATAAATGTACGTCTTTTATTCGCTTTCGATTC
ATTTTGAGCCCAAGTTTGGGTCGCGCTTGCGCCCAAACGGGCACCGTGCGGACGAGCACG
ATGCCCTTGTCTGCCCTGGCCCGTCCGTCGGTGATACAGCCCCATTCTTCCTCCCCTCCC
CTTTCCTCACTCCGCCATCGGCCCCCGCCATAGTCGTCATCATGCCCATCATTTATTTTG
CTTTGTCCGTTGGTGAACAACCCTTTTTCTTCCTCCCCTGTCGTCGGTTCACCCTCCGCC
CGCGGTGGCCCACCTTGCTACATGCGAAGGGGCTAGACGTGCCATTTGCAGACGCGTCTT
CGCCACGACCGTAAGGTGTTCGACGCTTTACTCGTAAGGTACCATGGATAGCGGAGATGA
GTACTTCTTTCACAATTTCATTTGTTTGGCGGATGATTCATCCTCACACAGTAAGGACAT
AGTGGTGGCAGCATTGGTCGTCCATGACCACATGAGTAGGATGCGGCCTCGGTTCAGGGG
ATCAATCCCCGACCATGCTCCGGCCTTGAACCGCAATAGGAAAAAAGGGCACCACCTCCT
CTATTTCGATTACTTTGAGAGAACCGCACTCTACAAGCCGCATCAATTTCGTCGCCGCTT
TCGAATGAGGAGACATGTGTTCAATCGTATTCGGGAAGGAGTTGGTGCATATGACCCATA
CTTTGAATGCAAAGAGGATGCCCTTGGTGAGCTTGGTTTCTTTTTTTACCATAAATGCAC
TACGGCTATTCGCATGCTTGCATATAAAATTTCCGGTGACCTTGTGGATGAGTATGTTCA
TATGAGTGAGTCTACGTGTCTCCAATCAATGTACATTTTCTGCAAGATCGTGGTGGCTGT
GTTTGGTTCTGAATACCTGAGAGAACCAAATGTCGATGATACACACAGATTGTTGACAAT
CAATGCGGAGAGGGGCTTTTCGGGCATGCTTGGTAGTATCGATTGTATGCATTCGGAGTG
GAAGAACTGTCTATTTGCTTGACGGGGGTAGTACAAGGGACACGTGAAAGGTGCCACTCT
CATACTTTAAGGTGCGGCTTCACAAGATTTATGGATATGACATTCTTTATTCGACATGGC
TGGTTCTCACAATGATATTAGCGTTCTTCGACATTCTTCAGTGTTTGCAAGGCTTGCACA
AGGCCACTATGTGGAGGTTAACTTTGAGATCAACGGTCACCATTACAACAAAGGATATTA
CCTCGCTGATGGTATATATTCTGAGTGGTCCACTCTTGTGAAGACCATACCCAATCCGTA
AGGAGAGAAAAGACAGAGTATTGCCCAAATGCAAAAAAGTGTTAGGAAAGACGTGGATCG
TGCAGTTGGTGTGCTTTAGTCTCGATGGGGTATCATTCGAAACCATGCATTGACATGGAG
CACTCAAAAGCTTTGGGAGGTGATGGCAGCTTCTATGATCATGCATAAAATGATCGTTGA
AGAGGAACGTGATGGCAACATCTACGTCCAACGATTTGATTTGTAGGGTGAGAATTTTGA
GTGTGAGTACACATCTATACTACTAATAAAAGATCAAACGAAAACTTCTCTAAATACACA
CAACTATTACCCCCACGAAAACAAACACCAATCACCACCACACAATTAGACAACAAATTA
CAATCTAACGGCCTTCCACCATCCATGCACCAC