Contig Data
morexGenes
Links



Map Locations of contig_137223 (4097 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137223

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6219 1 1733 bp MLOC_6219.1 Available Available LOC_Os11g14900.5, FRAME:+2, EVALUE:1e-64, 13111.m01535 protein thiol protease SEN102 precursor, putative, expressed





CDS Structure of MLOC_6219






Contig Sequence (4097 bp)

>contig_137223 4097 assembly3_WGSMorex_rbca.fasta
ACATAACTGGCCTGGACCCGTTTACGCTGTGACCTGTTTACGTTGTAGAGTTACCAAACG
CAGGAACCGTTTTCCATTTACGGCGTTAACATGTTACGGGTAAAATACCCGGAAACAAAC
ACCTCCTTAGATGTAGATGTCGTCGTACAAACATTGGTGGGTAATTTCTTAAACTTTAAA
TTGAATCTAACGGTGGATATCTGATGATGTACAAAAAAATGATTAGTTGATTCTAATTAA
CTCGGATTTTCTAGATAATTTCTTTATTTTTATCTATATTTTATTTTTAGTATATAATAG
AATAGAATTGATAGAATTGAAGATAGAAGATAGAAGATTCCATCTGATATTTTTGAGTGC
AAATATTGTGCATAATTAGTTGCCTGCCGAGCCTCTCGGCCATATATAAGAAGTTAAGAA
CCCCCTTGGCCGATGGTGAGAGGAAGTGCCCAACACACTTCGCTCAGCCTTGTTCGGTCC
TATTTGTGGTTCCATACCAAGTAACCATGGCGACCACAGTGGCGAGACTCCTTCTTCTGG
TGACCATGGTCTTGCTCCTCGCCGCGCCGGCGATTAGTGGTGGCACCATCACCATGTCGT
TCGCCTCAGAGGAGGTTGCGTCCGAGGAGGGCCTCCTCTCTCTATACGAGAGGTGGGCAC
ATCATTTCGAGAAGGCTCTCCCAAGTGGAGGAGTACGCGGTAGCACTCGTTTCACCGTCT
TTGCACAGAGTGTCCGGCTTGCGCACCAGCGCGGCCCCGGCAAACTGAAGCTCAACGAGT
TCGCTGACACCGCCCTGAACAATGGCTACAGCATGCGCTGCTACATTCCGCGGGCGCAAG
CCGGCGTCCAGGATGGCCAGAGGAGAAAATACCCAGATCCACCGGCGGCCGCGGACTGGC
GCACCGCGGGCGTGGTGACGCCGGTCAGGGATCAAGGGATAAACTGTGGAAGCTGCTGGG
CTTTTGCAACTGCATCAGCCATCGAGAGTCTTTACGCTATCGAGCACGGTGACGTGATCC
CGCTGTCCCCCCAGCAACTCATCGACTGTGACGGCAGCAACCGGAACTGCAGAGGCGGCA
ACCCTGCCGAGGCATTCCAAACCATTAAGCTCGGTGATGGCATCTCACGATGGGTGGACT
ATCCATACACTGGCGCCAAGGGCTGGTGCTACCCGGCCCGCAAAGGAGTGGGCATCAGGG
GCTGGGCGCGTGTGGAGCCACGGAACGAGAATGCACTCATGTGGTCGGTGTTCAAACACC
CTGTCACTGTAGGCATCGACGCCAACAGCCCGGCTTTCCTACATTACCGCGGCGGCCTCT
TCGACGGGCCCTGCAACACCACCCTCGATCACGTCATGACCCTCGTTGGCTATGGCACTA
CGAGACACAATGACCCTTACGGCGAGCCGGCGGGAGTCGACTTTTGGATCCTCAAGAACT
CCTGGTCCACGGCATGGGGCGAAGCCGGCTATATGAGGCTCCGGCGTGGTGCCGAGGCCA
AAGGTGGGGTCTGCGGGGTAATGCTCGATATCACTTATCCGGTCCGTTCCTATAAGCTAT
ATTAGTTAGAGGAAAAAAGACTGCCTATGGAATAAATTAAAGCTACTCGTTGTAAGATGG
GGCAAAATATTACTCTCTCCTCCGTTTTAAAATAAGTGTCGTGCGGGTTTAGTTCGGAGT
AGTTGGTAAGCAACTCAAAGTCCGTAGTTGTGGTCTTTGATCCATGATGACACATTGTAT
ATCTATAATGAAGAGGGAGGGCCCAACATTGGAGGAATGATAGAGGCCGCCCTCTTGCGG
TTTGTTGACTTTAATTCCATAGAAATTCCAGGGAGGCCAGAAACTAAGGGACCTGGCGCG
GTGCCATCTCACGGCCGCTAGACAGTGTGGTAGACTTAAGATGGTGTTTCACAGAGGGCT
TCACTAAGGTTGTGTGAAAACGAGGCCTTCTCGCATGATGCATCTAGGATGCGACCGGGA
GCGCATCTAGTTTGTGGCGGGGGTGCAAGCAGTGCCCATCCCTTCGTTGGACTTGAATGT
TTTTATATGATCAACAGGGTCCTTTCCATGACACATGCTTGGTACTGGCCTTTTTGGGGG
GGTCGCCTGCATTATGATCTATCTATCTATCTCTATCTATCTATCTATCNNNNNNTCTAT
CTATCTATCTATCTATCTGTTCTTTCTATTTATATATCTATCTATATCAATATCTATTAT
CTATCTATCTATAGTATATCTAACAAGCTATCTATAATCTATCTATTATTTCAATCAATA
TATTTATCTATCCATTTTACCATATTATATTCTATCTATCTATTTATCTAACGACCTTCC
TATGTATAGGTGTATCTATCTATCTATCTAACTAACTAACTAACATATTTATTCTTTCTA
TCTATTTATCTATAATTTATATTAAAATCACAATGCAGATCAAAATATTAGGCTAGAAAA
TCGCACAATAATCAGGAACACCTACTGTCAATTGGAATCCTGGAAATCCACAGCCAAAAG
ATCTAGACAACTAGAAAATTGCTCATACAAAAATATGTAAAAATAAAGTATTTATCCACC
TGTGCCATAATTTGTTTTTCCAACAATAAATAAATAAGGATGCGATGTCCAGCAAGCACA
TGCCATTTAGTTATAGTCTTTTCAAAGTAAGAGTATTGATTCCACTAGGAGTACGGGAAT
TGGACTTGGACTTTCTCCCTTATAGAGACTTGTGGTATTCTTCATGTAATTAAGTTTCTT
GTAGAATCTTACCAAAGTGAAACATAGGAGCCTCCTCTTCTATTCTTTTCAACCGACGCC
GATGTTTCCATCTTTCTCTCTCTCCCTCTCTCGACCGCCACCCGTGGCCAAAATCAGCCC
TCCTCTCCCGACCCAATTCCCCATCTCCTGCCATCACCGTCGCTCCACCATCCAGGCAAA
AAAATGCTCCCACGGAGTTTGTTCCTTTTAATGGACCATAGATTTTTGCTCCCTCGACGG
GTAGCTGCTTTTTGGGGCAACCTTTTTTTTTGGAGGCGTCGATGGTGAGCATCAGCGGCG
AGCGTTGACATCGAGGTTAAACAGGGGAGGGTGGACACGTGCTGCATGATGCGATGGCAG
TGGGACGGCCGCCATGAATCTGCATTGTTTTTCCTTACATCTGATGTGCTAGTGAGATTG
AGAAACGATGGGATAGGGAAGCATCTCATGTCCATGCGTGGGCGCTCTGACGGATCACGC
ACGACCAGCCGAATTTTTTAGCCGGTGCGCCGGTGCGCCGGTGCCTAGTGCTCGCGTTTT
TAAAAATTGTCCGCACAATAATGACGGTTTTTAGAAAGAAAAAACCCTGAAAGATGATGA
TTCTCTGAATGTGAGTCTCCAATTTTGAGAGCTTTTTTTACCGTACCGTATACTGTTTAG
AGGGGAGGCAGCAATATATAACATAATCAAACCGTCAATTTCTTAAGGATACGATGGGCA
GAAAAATATTTGTATCAAAGGAACCGCTTAGTTAAATATGAAAGTTTGAGATATACTTTC
CTACAAAGAAAAATAATATGTCTCTTTACAGAATGGGTTCTTACGATTTTATAACAGAAA
TCCTAACAGAAACTATGTGAACCAACACATAAAAAGATTGTACCCAGGCATCAAACCCCT
GTGAGTACAGGAGAACAGCAAAGCGGCAATGTCAAATAAGCAAAATGCAACACTATAGAC
CACCAGCCTTGACGAGTACCAGCTCCACCTTCAAGCAAGAATCTGCCTCGAGGAACAGAC
TGATCATCCAAAGTAACAACCAGCTGAACCATCTTCTTCACTGCAGCTTGAAAATCCACA
TAATCACCCTCCTTCAGTAATCCACATAATCCACATAATAGCACTGACTGTAGGGAGGTG
GAGGGGGGGAGCCAGTCGGTACCTATGGAGAGGACCCCCGGGAGGCGGCGGAGGTGGGGC
ATGTCTGTGAGGATGGACTGCAGCAGCCACGCCTTGCATGACTCCGCGGCGCCCGCGGCC
GGCGCCTCTCCCCGCGCGGCGACAAGGAGGAGGAGCGGGAGTAGGAGGGGTAAGTGCCGG
CGGCGACGAGGCGAAGG