Map Locations of contig_137221 (8787 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_137221

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6215 4 2382 bp AK366127 Available Available None





CDS Structure of MLOC_6215






Contig Sequence (8787 bp)

>contig_137221 8787 assembly3_WGSMorex_rbca.fasta
ATAACTTGGGAGCTGGAACCCCCCCGGGAACCGCAGGCCGCCTGACAGCGCGGTGGCCAG
CGGCAGGGGCAGCCACTTCCCGGCGCCGAGGGCCTCGTCCCCGCGCTCCCACGTGGCAGA
CCCCTCCGGCGACGCCGCGGACACGTCCATCACCATATCCGCAGCCGCCGCCGGTGCCAC
GCCGGCAACAAAGCGGTGCTCCTCCAGCAGCCGCGCCGCGGCCACGCCGTTCGCGAAGAC
GAGGCAGAGCGTCGCTGCGGCGACGAAGGCGCGGCAGCGGTCGACCATGCTGGAGGTCAT
TGGTACGTCACGTCGAACTCTTCGCCGGTGGTATACGTCTCGGCCGTGGTGCTGCATTGC
CGGGCTCTTCCAGGCCGTATATGTAGGAGCTCATGGGGGTGTTTAGGTACGGGTTTGTAG
TTGTACGCTGCACACGCATGCATACTCTACGTGCAATGTTTGTTGGGGAGCTGACTGCTG
ACCGGTGCTTGAAGGTGTTAGCAATGGCGATGGAGGGAGGCAGAGAGGTAGAGGTTAGCT
GATGGTTCGGTTGGGCCATGCTATGTTCGTGCTTGCGACTTGCGAGTATTTATTTTCTTT
CTCTTTTTGAAACACCAGAATTGAAGTTTAATCATGCATATCCTGGTACATGGTGTAAAC
CTCATAGGTGCAGAGCCTGAGTGTAGGGCAACTCGAGCGCCGTGCATCAAATTAAACGCT
CGTAAACGCTCGGACGCTTTAATTTCATCCAGCGTCATGCACCAAACGTCCGCGGACCGA
TTTGGATGTCCGAATTCCCACAAAGCCGAAAGCAAAGCGGGGGATGTTTACGAGCGTTTT
GATGGCAAAAGCGTGTGAAATGGTGAGCGAGGTATTTGATGGCCAAAACATGTGAAACGG
AGGGTGCCGGTCGTGCAATCGCCGCTGCCCCGCAGCTAGATTCTGCAGAAGCAGTCATGT
TCAAAGTCAACGCCAGCCATCAAGTGTGGTTCAGCGTTGACCTAAACGGGGACTATATCT
TCGTCGAGGCTTAGAGCATCTCCAACAGCTGCACAAAAAATTCGCGCCCAATAAATTTTT
TAGCGCGCCGCTGCAGCACTTTTAATGCGTGGGAACCAGAGCATCTCCAACAGACGCGCG
TGCGCGGCGCCCAATCCAGCAACCTCACCTGCAACGGTTCAGAAATTGCTGCGCGCACGA
GCCGGCGCCTCAAATATAATGCGTGCGATAGCGTTTTTCAGCGCGTGCCCAAAACTTTTT
AGCGCTTGCACAATTTTACAGCTTCTGTTGGAGTTGTCCGGCGTCCAAAAAACAAATAAT
TTACCGTGTGGAGTACTTTTTGAGCGGCTGTTGGAGATGCTCTTAGTCGCAGTCACGGTA
GCCGACACCTGACCGTTTGCGGATGTTGGCTCCCTCGTCCTTCGGTGCTTGTTCTCTGTT
TGTCGGAATTTCTTAACCAGGCATGACGGTGGATGAGGAGGAGGGACTGATGAACATGAT
CCACGACAGCGACGACGCAAACCCAAGTGAGGACTCCCAACTGGAGTCGGAGACCCAACA
GACGCACACCCAGATGTCGAACATCCAGTGGGCACAAACCCAACCGACGCACGCCCAACA
GCCGGACGACATTTCGATGCCAGGTGCGGGCGCAAAGAAGAAGAGGGGAGAAATTTTAGT
ATGAATCATTGACTGATTTGTTGGCCACAAACATTAACCGGATTCATAGCACGGAGAGCA
AAGGGGAGGAACCTTTTGGACAAATGTGTATGCTAGGTTCTATGAGCAAAAGCACTATGA
TCCCTATCGCAGGGAAGTGGTCCATGAGCGTATTTTGAAGTCCCTCACTAATTGATGGTA
TACCATTCAAGAGGTCACAAGCAAGTACAAACAATTGCAAATCTGATGGCCAAGTGACGC
GATACTCCAAGAGCTCGTAAGTTTTTTGTTGCTCTATGTGTGTCATTATGCTGAATATGC
TCTATGAGTTGGTCATTTGACCGAATATGATCTATGTTTTGGTAATTTGGTTGGATGTCC
AACTTGTTGATCATGTCTTTTTTTCTAGGCCGATCATTCATGCACATTGTTCTTTAGGAC
GGAGCAGAAGCACTCCCTCTTCATGCATTGTTGATTGAGATTGAATACACACCTCAAGTG
GCGCAATGTCGTTGCCAATTCCTTCAAGACCGCTGCCATGGCCAATGCAGATGAAGATGA
TGATCCAACAAAAGAAGGCCTTGCTCCAACCAAAAGGATGGGTAAAAACTGAGGGAGGGA
GTGAGAGGAGAGGGAGAAGCGAGAAGGGGCGCCGGCCATGATATGGAGAGGTTCGAGGCC
ATCATGGCGAAGGAGTCATGCGTCAAGGGCAGTGATGTGAAGGAGGAAAAGAAGACGGAA
AGGTTTGACAAATTCAAGGAGGTCCAAGAAGATGAAGCTCTAAGAGAATAAGGTTGATGC
AAAGATGTTGATCATGAAGATTTTAAAAGTGTATTGAGCGGTACACGGACACTTTGAGGG
TGCGAGACAAAAAATGAAGAATTTGGCACAGACGGCCGGACTAAGAGGCAAGATTGACAT
CTTTTGCGCGGACAGCTGTCATCCTTTAAGATCGGTTGGGCATAAAAACTTGTTGAACAC
TCGATTTTTTTTCTGTGCGTGATTACTAGTTATACATATGCTAAATTGCTATTTATCTAT
TCCCTCTGTAAACTAATATAAGAGCATTTGTATCACTATTTTAATGATCTAAACGCTCTT
ATATTAGTTTATGGAGGGAGTACATAGTATATGCATGTCAATCGGAATCACTAGTTATAC
ATATGCTAAATTGTTACTCCCTCCATCTCAAAGTAAGTGTCTCAACTTTGTACTAGCTCT
AATATAAAGTTATACTAAGGTTAACACATTTATTTTGAGGCGAATGGAGTATTTATCTAC
ATAGTATATGTATATGTCAAACGGAGGAGACCAGGGCTGGATTGCCCGTTCCACTGCCCC
ACTACCTCTGTTCGCAGAGACATACAGACATCTTCACATCTTCGCGAACGGTTGGTGTGT
CCAATTTGATGCAGAGCCAAATCCAATTATCATGTTATATTCATTGTCTAATTTATTTAT
TTTCTGTTACGAGAGCTCAAGTTTACCCTGTTCCTTTTTCCTCACATAATTTTTCGTTTC
TCATTGAGCAGTGAAGGACTTGGACCTGAATTTCCTGTACTAATTCGTGAAGTTCTTTGA
GAAATATAAGCCTAAAATGGTTTACATAGCCGGCTGCCTGCGCATGTTTGTCAGCCATTT
GGAATGGATGAAGAGAAATATACTCCAAATCACATAGTCCACCATGCGTGCAAGGACAGA
TTAATAATAGAAACGACAGATTTTCAGTCTCCAAATCACCAGGTCAATATCGCGTGATGT
ACAGGTTATGACTGTATCGTCATGCCACAAACTCTTCACTGGCTGAAAACACTCAATTAT
CACAAAAGAGTTCAGATTACAGATTAAACTGTGACGGGCAAAATTGCTAGGATGGGTACA
CTGATTCACTGACACTACTAAATATCACTACAGAAGGAGCTCTGATCCAATCACCAAATT
CCATTGCCATCGCCCACCGGGTTGCATGACAAGCATCAATGTCCATGATACTGTGGTCTT
CTGGGCACAGACCGTTTGCCTTGGCGGCACGAGTCAGCATTCTTTTGCTTCTACACTGAC
AACTGCAACTAGCAAGTATACCATTATATAATGCGACAAAACTTCGGCGGAAGCTTCTCA
CTCCCCTGTAACTGGTCTCTTCTCCAGCAATGATGACAAGAAAACAGAACACAGTTTCGT
GAGGGGCGGGAGAGCATGAGAAGATCCAGTGAATATAGTTTCCCAGGGTCTCTCTGATGG
GATAAATGGAATATCCGAAACCTCTTTGTTCAGTTCCAGTTTTGGAAGTTCTCCATAAAT
AGAAGCATAACCGATTGGTGCTGAAACAACAGAGATGACCATGAGTACATTTTCTATCAG
TTCCAGCGCAGCAAGGAATAGGCCAAAATTGCTTTTACCAGGCACAATGTAAATGATATT
CACAAAGTCTCTTCGAGGTATGATGACATTTAACAATAAATACTCCCTCCATCCCATAAT
GTAAGACGTTTTTTGACACTACACTAGTATCAAAAAGCGTCTTGCATTATGGGACCGAGG
GAGTACATGACAACTTGTCATGTGATAGTCAAGTGCCATATAAACCTTTCCACTAGCAAA
TACTGATTATTAATAAGAAAAGGCAGGTTAAGAAAGCAAAAAAGTCATACAACAAACTCA
CCAGGTTCATCGGCTTGAATGTTTTTCCGTGTGCTCTTGCTGATTTGCAGCTCCTCATTG
TTTCGGGGATCAAAGATAACATATTCATGTGAACCATTTACATAAACCAGCAATGAAGCA
TCTCCACTTGTGTCGTCAGTGTTTGAATCCAAAGAGGGATCGGCCTTCACAAAAGCAATG
CTACCTCCTTTTGCCTGAAAGAAATGAGAAGGTAATAGAAGGTACACATTAATACACTCC
CTGCTGAATTCCCCTTTTTAAAAAGCAGATACATTCAGAGGAGAAGAAACCAAACAACAA
AACCAACAGAACATAGACAACACACAGTGTGTGATTAGAACCTTAGAGGAACAAGTCGTC
GAATGGACCATTTAATGTTAAACTCTAAACATAACCCATTTGCTTGGTTTCACAAATAGA
ATGGGTTGGCCAAGTACCACCTCTCATAAGCCTAGTCAAAAAATGCTGCTGAGGGCACAT
CTACCAAATCACGGGATGGTCCCAACCTATCCTAGGACAAGGTGGTCCCTCACACCGAAC
GCCTCTAACGGACTACATTACTAAACTGCAAATTCTTAAAGTGGGCAATAACAGAAAGCT
CACTTTCACAAAGTCTATATTGCACTTCAAAGCTAGTGGTCATGAAATATAGCAAGTTTT
CAGAGCATACCTTCTTTACAGACCAGGAGGAAACCGGTTTTGAATTTTCTGCATCAAAAA
TCAGTATTACCCCATCTTGCTCTGCCGGTGCTCCTCCTTCAGGACAGCTTAGAAGAGAAA
GAACCGCAAATTCACTCTTACTTGACGAACAACATGCAGCTGTCAAAGCATAAACACTAA
CATGAGAACTAGATCAAATGTGCTTGCCTGAAAACATTTAGTTGTGTTGGTACGAGGAAC
CAAGCTAGAACAAGGGCTACTAAAGTAATTATAGTGTGGTGCTTTACTCCATATGATGCA
AGTGTGTGACACAACTGGATCATGAACCACATCTGTTAACAGTATTACACTGGACCTGGG
CTACTTCAGTGTGATCATTTGGTAGCCCTCGAAGATGGCCAAATTTATCCAAATAGTCAT
ACTGGCCTGAATTATTAAAGAGCAATGGTCATGCAACCAGTAAAAACTGATGCAACAAGG
TTGTGCCAGATCATTTTAGTGCGCCTCTAATTGGCATGACCAAGCAGCTTGATACTTCTA
CCAATATTACAGATTCAGAACTCGACAACTGGGTTAGCCAATACTAGAACAGAATGCGTA
GTGAAAAATTTAAAGCATTCATCATGTGCTAGATGCTATTCCGCCTTCATGCAAGTTTGC
CATCATAGTTTTATACCTTCTGCAAAAAGGGTGTAAGACCATTGCATGGAAAGATTTGAC
ACATTCCACACAGCAACTTGTGGTTTTGAACTCTGAGATAGAGACATCAAATAAGCTGAA
TCCCCAGCGAAAGAAAGTTTTGTAATGGGCTGCAAATTTAGAGGGGGAAAAATCAAATCA
CTTATGTCAATATAGTGGCAAAAGTACAACATAAAGAACAATAAAATACCGATAATGCTT
CTGCAATCACGCCAACAAGTGCATTATTATCAGGGTCCCACAGTGTAATGACGCTCTCAG
CTGCAACCGCAAGAACAGACCCATCGCCTGAGAAGGCTGCGGCTGTCATAGGTTTCTTCC
TACAAAATTAAGTTATTCAAAATATCATCTGCATCATTTAACAAATCAATAGGCAATAAA
TGAAATAATCGCTCTTTATATGTGTGATTAGACAGGTCATTAAACAGTTACACTAAATAT
GCTTATAACTAGTCTTTATACAACTAAATGTAAACATATATTGCTTAAAGGAAAATCATG
GTCAACTCACTTGTATGAGCCAACTGATTGGCATCTCCAACCAGATTGACTTTTTCCGTC
ACTTGATTGTAAAGACAAACTTTGGACCCACACCTACAGGTCAAAATATACTCAGGATAC
GGAGAGAATCAAACAAGGCATCGTCCACAAAGCTGATATAACATGCACACCTTGAAGTTG
CAACCAAATGAAGAACTCACGGCCATGTTTTTTCCTGGATGGAAAGCAACGGCAGAAATC
CCAGCATCACTGTTATGGAACATGTGAGTCAGAAAACATAGTATTACTATATATTATCAG
TGACGTGATAAGCATGTACACCAACCTGTGAGGCTCATAAATGACAGTGGACAGATGAAA
TTGTCCAGTACGAGACCCTTGGTTCCAAAATTTCAGTGTAACAAGGCCACCTAATTCTTC
TTCAGGAAGCTTGACCTCCACAGTGCACATTAAATTGCCACCAATGGACAATGAAACTAA
AGAAATGTACATCTATATTAAGGGGACAAAGGAAAGGTGTCAAATTGTGAATACCAAACA
GAGAGTGACAAATTATGAATATCACATAATAGTTTATTCCGGAGATCCCAAAGAAATAGA
TCTATGATACTCACTATGTAAAAAAATATAAGACGTTTTAGATAACTAGTTTAGTGACCT
AAAACGTCTGATATTTGTTTACAGAGGGAGTAGTAAATACGACACAGCAAGTATGTCAAC
CATGTTCAGGACATTACAGCAGACTATTTGGTGCTTTGAAATATTTTCACATAATCAAGA
TACAACATAACCATTCAGAAGAAAAATCATTAAAAAGAAACATATATACTATAAAGAAGA
GAACTTAAGTAGTTAAACAGAGGCAGGATAGGACAAAGGTATCACACCGTAATATCATCA
ACAGGCTGAAAGTTCCTCTCACACACTTGCACCTGAGCAGGTTAACAATATTGGAATCAA
TCTTATTAAAATGTTGCACACAATAAATCTCTTAAGTTGATTGTCTTACCTCTGAAACCT
CAATGTTCTCAAACAAATTGTAGAATTGTATGCAGTAATCTTGTGTTGGTATAGCAACAA
GGCCATTAGTGGAATCAAATCCATACACATCTCGTCGACTCAAATCCGCGGAAGCAACCG
GTAGCTGAGGAGACACAGACGGTAAAACCATAAGGGGAGATAAACACAGACAATATATAC
AGCCATAGGTCTCAAGCATATTGAATAATTGTCCGAACGATGGTAACCAAAATCTGACAA
CGTCATTTGCTGGCATAAACAATTAAAGGGAGAACTGCAGATTTTGATGCACAAACCTTA
ATTCCAGCAACAGTTTTCAGGACCTCCATGTTAGGCATTTTTAGAAGATGAACTTGGTTA
TCTTTACATGACACCTGCAAATAACAAAAATTATAGCATGAAAAGCTTGGCGTCTTGGCG
ACACAATTCAAAGTGGAATAAGATGTCGATATCACTCTATCAATCAACATCCTCATCCCA
GCCCTGTTTACAAGTAAATACAATTCACGTATATATAACAAAGCGAAAGCTCAACAGATA
TACTTTATTCATTCAGTTCCAATCACATTGCTTGATCAGCTCCTGAAGCTGTACGAGCCC
AAATTCATGAATCGGCATCATCCCTAAGTAAATATTACTGTGCAAAGAGGCATCGGTGAA
CCAACCTTCTAACAGTACTACTTCGAAATGTTCTACTGCCGTGACAGCAACTACACCTGA
TACTATCACAACATTTTCTCTTTGGGCTTTGACCACAAGATAGATCCATAATAAATATTG
TACCATGAAGAACTTCTTTCAAGTGCGAACTCTACAGTATAATCTTTGGCATCTATAACC
CACATTTAATTGGTCTAATTTTAGGTCAAAGTTCAATTTTGAAATGTGTGCACGCCTTAT
TCATTTGAATGGAGGGAGTACAAATTTAGCAGCAACATGATAAAAGGCGGGAAAGCAGAT
TTATGCATCCAAACTACTCCCTCCGTCCCAAAATAAGTGTCTCAAGCTTAATACTACTTT
GTACTAAAGTTCAAAGTTGAGACACTTATTTTGGGACGGAGGGAGTATAAAGCAGATGAG
AAGTAGCAACCAAATGATACAATGAAATCATGCAAAATGACTACATGATAAGCATGTCCA
CACATTTCACGCCAGGTGTGCCTACTAGGAATCTCACATAACTTCTTAAATCACCAAATA
ACTTCTCTGAGGAGAAATAGATCTCAGGTTCTTGTAAAAATACACTGAAATATCATACAG
GAGGTAAAAGAAGTGATACTTACACAGGAAATGGAAGAGTCTGGAGAATCTACAAAGAAG
AGAAGAGGAGATCCCAGACGTGGCTTATACCTTCTCTTTCCAGTATCTAGTTGCCATACA
ACAATAACCCCCTCCATACCACCTATAAGATAAGAAGATGCTTGTCACTGAAGTTACAAG
GCTAGACAAGAGGGTCAACATACAAGACTAAAATGCAGTATAAAAATGGCATCGATAAAA
GGTAAAAGCATCAGTAATCAAAACCTGAGAGCAAGTAAGCTCCATCAGAAGAGAATTTGA
CAAAGTTCACTCCGCTAGAATGCCAGT