Contig Data
morexGenes
Links



Map Locations of contig_137218 (5432 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137218

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6210 5 2033 bp AK370424 Available Available None





CDS Structure of MLOC_6210






Contig Sequence (5432 bp)

>contig_137218 5432 assembly3_WGSMorex_rbca.fasta
GATGCGTAGCAGCCCCCTTATTTTTTAGTTTTAAACACGCGGAATACTCCTATATCGCAA
CATTATGTGCAAAGAATTTTATTTTTTTTGGTCAAACAGATGCCAAACTTATGGGATGCG
TGCAAAATGGATCTTCCACGAGATATATCCCCTCGAGCCGTTGATACATTTTAACCTCGC
CGGCCGATAACTAACCCCGAAGGATGTAAACAGTCCCCGCGCCATTCACGCCGGCGCATG
CAACCGCACAGCCACAGATCGAGTCCTCCCCCCCGTGGACTAAACCCGCCGCAACCACCT
CGCGTGTATAAATACGCGTCCCCTCCGCCTCTCACTCCCTCCCTCCACCAGAATCCCCGA
AGAGATCCATGGCGCGCGCGAGGGCCAACCCATCCATGGCTTCCTTCGGCGCCGCCGCCT
GCTTCCTCCTCTGCGCGCTGCTCCTCGTCCAGCCCGCCCCCGCCGCAGCAGCCGGCCGGA
AGCGGTCCTACGTCGTGTACCTCGGTGAGCACGCGCACGCGTCGCAGCTGCACGACCTCG
CCGCCGTCGACCTGGCGGCCGTCGAGGGGAAGGCCGCCGACTCGCATTACGACCTCCTCG
CCACCGTCCTCGGAGAGTAAGCAGGCCACGCCCGCCGTTGTTTCTTGAACCGATGATTAG
TTGTAGTAGATGCGTGCATGCATGGAAGGCTGACGTAGATTTCCTCTCTGTTACGCTCAT
CGCAATGCAGCAAGGCGAAGGCGCAGGACGCCATCTTCTACTCGTACACTAAGCACATCA
ACGGCTTCGCCGCGAACCTCGACGCCGATCAAGCCGCCCAGCTCGCCCGTGAGTAGTCTT
TGCTCCTGAAATACGGTGTCGCCGATCGATCGATTAACTGACTTCTTTCCGGTCTGATCT
AATCTGCAGGGCTGCCGGAGGTGGTGTCCGTGTTCCCGAACAGGGGGTACCAGCTGCACA
CGACGCGGTCCTGGCAGTTTCTTGGCATCGCCGGGCCCGGAGGAGTCCCGCGCGGAGCGT
CCTGGCGCAAGGCTAAGTTCGGCGAGGGCGTCATCATTGGCAACATCGACACCGGTACTT
TCATGATCGAATTTATATATAATCATCGGTCTCATAATCAATCTGGTTGACTTAATCTGA
TCACATATATTTGGGACAATATATACCCCATATATAGTCTAGAAAATCAGTAAACTAGCA
AAGTTTTTTTTGGAGAAGATACCAGTAAGTATCAAAATTGTCTTAGATCGGATTGCAAAC
CACCCAAATCTGCACACATGCTGTTAGAATTCCTTTTTTTTTATCAATATGCTGATACAA
TTTTATAGAACTCTAAATGCCAGATATTCTTACATGTAAAACTTGTATGATATACCTACG
ACCTTTGTACTGAAACAAACAAACTCGATACATATTCTAAAAATATCATTAACTCCTTCA
ACATATTTTTACTATCTAGACTCACTTTATTCTTTTAACAAAATTGATGCCGTCAATAAA
GTACTAGATATACCGTGTGTTGCCGTGGAATTGGATATATAGTTTCTAAATTTTGCGTAG
AATACTAATTTAGTCCTTGAGATTTAAATCATGTACGAGATTTTTACTTCTGTTAAAGGG
AAATTTTAACATGAAACGTTGTGCATCTCATAGTTAAATGAAATGAGATTTAAAACTCAC
TTTTATATGCACTAATGGGCGAGTGTATGTGTGTGTATATAAGCGTTTGCGTCTGTACTA
TGTTAAAAAATGCACTAATGCATGTTGCTTGATAAAGATGGATGCTAGTTGATCAAGCTA
CTCCCTCGGCATTATGCATATTAGAAGGTGCACTGCAACCTAGGCATGCAGAGATTGGGT
AGGAGAAGATACTAAATTGTAGAGGAAGTCAATCACACTATTTCTTTCTCAACTAATAAC
ATGCTATTAATTAGAAGACCTCTTCAAATCCAAAAAACATGATGCATAAATTGCATGTAT
TGATCCTTCAATTAATAGATGAGGTCTAATTAATATGCATGCAACTAGTACTACTGTAGT
GTGCCTTAGCGTTTTGGGATTATTTGATTTTCATAAGATGCCTAATGCACCGAGACGGAG
GGAGTAGTAAATCTAACAAGTGTAATCAATGTATGTATATCACATAAATTGCACAATTAT
AAACTTTAAATATTATAATTTTCTAATGTTGTAATTTTGCTATTTGTATTAAATTATTGA
AATTGACTATCTAGGGATACATGTAGGCAATTTAAACCCGCTTAAAGGAGAAAATATATA
GAATTGCACACCATCCAACTGATGTTAGAATAGAAAATATTTCCTTCGTCTGAAATTAAT
TGTTATTAATCTAGTATAATTTATTATTAAATCAAGACAATTATTTGGGGACGGTGGAAG
TACTGTAGAGAAGGTCAGCAGGCTATTCGAGTGTTGTTGACTCTTTCCCATTCACTAATG
GATGCATCTTTATAGCTGATCTTTTTGACAGAGCAAGTATATAGGACCATCCAATGATTC
CATAGTGGATTCCCATCTGTACATGCAACCATGCTAGATGCTCCCTCCCCTACATTCATA
TACTCACTCTTTCTCGACATGTTCATTACAATTCTGAGGCAGCCAAAGGATTGATTGGCC
AGGCATGAGCCATGACCTCACGTACTACTGCAAACCAATCAGGATCCATTTGGGAAGGGG
GGAAAAAAATCCTTGTCCTCGTTGAAAATTAGCCAGCAGATTTTTCATGAAATTTCTGCG
GTCCAAATAGGCAGCAATTGAGATCTTTTGTTTAACTGTTGTTCTCAAACAGTTGTCTCT
ACTTTGGATTGGAATCTGCCGTTCCAGTCGATTAATTTGTATTTCAATCGTGATTCATGA
TGCTGATATATATTTGCTCTTCTTGCTGTATGGATGTGAAGGTGTGTGGCCAGAATCGGA
GAGCTTTCGGGATCATGGGCTGGGACCAGCCCCCAAGCACTGGAAAGGAACATGCGAGAA
AGGCCAAGACGATGACTTCCACTGCAACGCGTAAGCTAACGAACTAGTAACTGAACTTCA
GTTAATTATACACATTTAATTGATGCATGCATTTATGCTTGTGCTAATTAGTCACATAAC
TCGTTTGGAGCAACTTCTTTGTGTCTCTTTCAGATCCAATAACACCCGGGAGTGCATACT
GTGCACATACTTTTTATGATCCGAAAAGTTGATATACTTTTGCCTAGTGTAGCACTGATC
GAGTTGAGACCACCACCATGCACATATATGAGCAGTGGGAGAGTTAGACCACCACCAGCT
GATGCCTCTATAGGGCGTCTACTAGTAGTAGTAAGTGGCAATGATGGATATATGTGCATG
CTTTGACTGCATGCATCATGTCTATCCTTGAATTCCTAATCCCAGACGACAGTGACACTG
CACTGAGCCTGAGTGGTACATAGTGTCTCCCTGCCCCACCTGTAAGAAATAGTCAGCCAG
AGAAGAAAGAACAGGAAAAGTTGCATGCCTTTAATAACAGAAAAAAAATCAGACTACACT
GTATGCTCTTCTCTTTTGTCCCTGCACAATTGAGCATAAAGAAAAATAAGGAACACTTTT
AGAAACTATTTTTGAATGTGCCCTCTCAATCATTGATCGAATGGATAGTGGACATTCTCC
ATGCATCAGAGTTTATTCATCGAGCTGCACAGTGCATTTTTTTTATACTCTAATTCTATC
TCAATTTTTGGCGCGCATGCATGCAGGAAGCTGATCGGGGCGCGCTACTTCAACAAGGGG
TACGGTGCGGAAGGCCTCGACACCAAGGCTCCCGAGTTCAACACGCCGCGGGACAACGAG
GGACACGGCACACACACGCTGTCCACGGCCGGCGGCGCGCCGGTGCCCGGCGCCAGCGTG
TTCGGCTTCGGCAACGGCACGGCCAGCGGCGGCTCGCCGCGGGCGCACGTGGCCGCGTAC
CGCGTGTGCTACAAGCCCGTGAACGGCAGCTCGTGCTTCGAGGCAGACATCCTGGCTGCA
TTTGACGCCGCCATCCACGACGGCGTGCACGTCCTGTCGGTCTCCCTCGGTAACGACGGC
GAGCCCTACGACTACTTCGACGACGCCATCTCCATCGGCTCTTTCCACGCCGTCCGCCGC
GGCATCAGCGTCGTCTGCTCCGCCGGAAACTCGGGTCCCAAGCCGAGCTCCATCTCCAAC
CTTGCCCCGTGGGTCTTCACCGTCGGTGCTAGCACCATGGACCGAGAATTCCCGTCTTAC
CTCGTGTTCAACGGCACCAAGATCAAGGCACGCTTCTTCCCCTAGCAAGCTCACAGTTAT
TCATCGTTTCTGGATGTTCATTAATTATATTGTTTTGATGCATGCAGGGGCAGAGCATGT
CGGAGACATCGCTCAAGACCAAGGACCCTTACCCCATGATCGACTCCGCTGAAGCCGCAG
CGCCCGGCAGAGCGGTAGATGACGCGTACGTGTATCAATGTCTCTATGCTGTTAATCTTG
TCTACGACTAGGCAGTAATGTGTGATTTTTACATGATGACATGACGATGAATGTGTGTGC
AAGTGCAGAAAGATTTGCCTGCAGGGGTCGCTGGACCCAGAGAAGGTGAAGGGCAAGATC
GTGGTGTGCCTGCGTGGGACAAGTGCGCGTGTGGCCAAGGGCCTGACGGTGCTGCAAGCC
GGCGGCGCCGCGATGGTGCTCGCCAACGACGCCGCCTCCGGCAACGAGGTTATCGCGGAC
GCGCACCTGCTCCCGGCCACGCACATCAGGCACCATGACGGCCTGACCCTATACTCCTAC
CTCAAATCCACCAAGTAAGCAAATCAAACCATGGATGGAACCTGCGGCGTAATCTATACT
AATTACTGCTTCTAAATAATTGGCGCTTAGATCGATGCATGACGTTGTTTCTTGTTGATT
GATGTGCATGAGAAGGTCTCCAGTGGGGTACGTTGAGAAGCCGGAGACGAGCCTGGAGAC
GAAGCCAGCGCCGTACATGGCCGCTTTCTCCTCGCAAGGACCCAACCCCGTCAACCCGGA
GATTCTCAAGCCCGACATCACGGCGCCCGGGGTGGGCGTGATCGCCGCGTTTACGCGCGC
CATGGCCCCCACGGAGCTCGCCTTCGACGAACGCCGCGTTGCCTTCACGACCATGTCGGG
GACGTCCATGTCGTGCCCGCACGTCTCCGGCCTCGTGGGGCTCCTCAAGGCGCTCCACCC
AGACTGGAGCCCTTCCGCCATCAAGTCGGCAATGATGACGACGGCGACTGACGTGGACAA
CAAGGGCGAGTCCATCCTCAACGCATCCTTGACGCCGGCCGGGCCCTTTGCCTACGGCGC
CGGCCACGTGTGGCCAAGCCGCGCCATGAACCCCGCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCTCCCCCTCCCCCCCCCCC