Map Locations of contig_137217 (5992 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_137217

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6209 2 801 bp MLOC_6209.1 Available Available None





CDS Structure of MLOC_6209






Contig Sequence (5992 bp)

>contig_137217 5992 assembly3_WGSMorex_rbca.fasta
CTGTGATGTGTCAGCTGCGCCTGAATCCTGCTAGATGTTTATGACTCTGTAGTTGTTTGC
TCCTCTTGTTGTTTCCCCTGCTTGTATGTCCGATGGATGCCATCAAATGTTCAAACCTCT
GGTTTGATAAATGGAAATGAAGTATCTTTTATGATAGACCCGCCCACGTTGTTCTACCTT
TTCTGTGCAGTTAGATCTTGTGCGTGCTGGTCCGACTAGGTGGGTTCACTGTGTGTAAGA
ATCAAATCCCCTGTTTGGTTGCTGCAAGCCTGCAACTACGAATTTCTTGGGGATTTTGTT
CCTGGATTCTCTGGCTGGAACTGTTGGTCTGTACAGTTTAGGAGCACATCCAGGTCAAGT
GAAATTGCAGATCTGTTGTTCTGTTTTGAGCAATTAGTAATCCCCTACACATTTGATCGT
CTAAACAGATCTGCTACTTGCTGCAGATTCACTACTTGCTGCAGATTCGGTTATAATAAT
ATGTATGCAGAAATGACAATCTGCTACTTTCTTGTGCAGCTACCAATCAATTCTGAAACA
GCTCTTTCAGGAATTCAAATGGAAAGATGGAGTAGGTCCTGAGCTGGCTTGTGTAACCAT
GAGTACTAAGCACTAAATTGGATGCAAAATCAAAACAATACAAGGAGCCTGCATTTTTGC
ACATGCTTTTGATAAACAGCACATTCACTATAGTGTTGAGTCTGTCCGCAGGTATGTTCT
TTATGAAGTAGTAGTACAAGCAAAGTCACAGTAAGTTTAGTAAGTGTATGAGTTCAGTCT
AATGCTCGTTTCCCTTTCTTCCAGATCAGAAGCCAAGGATTTGTCAAGCGAGGACTCGTA
GGCATCAAAAGATTGGACAGTAAAATGCAAATCAATATAGAATGATTGTTCAGCAGGAAA
ACTCTGGCTTGAGCGTGTTGTAATTGCAGAACATTCCTTTTGGCATTGCATAGAAACTGA
CAGCAAACTCGCAAAACAAAAATAAAAATAAAGAAGTGGAATGAATAAATATTCATCTGC
ATAGCCTTATTCTAGTTTGTTCGAATGTTGCAAGGCCCGGCTTCATCAGGAGGTAGTGGT
CAGGTAACACAGGAGCTTCAACAACAGCTGCGAAAGAGAGGTTTGCGCATATGGACTGAC
AAATATTTCAGCATACCAGTTTCATCGTGAAGCTCCATTACTTCACTGAAAACTGTTTTC
CCCTGTTATGCAATCAGATCCATCATCCATATCTTTCAATGTGGTATCTGAAGAGATTTA
TGAAAAGCAGCGTGGCTGGTCTGCTGTCTGTTCCAGATTCAGAGTTGCGCGAATCACCGA
GACTTGTGGTTGCAGAAATTTTGTTGCCCGCACACAGATCTTGGCATGTACTATATTTTT
CTTGACACAGCACAACAATCAATTCTGATGCACAAACCAGGACCTCAGGATCATGTCAGC
ACTTGCTCAGACTTGCTTGTTTCGATTCTTTTGTTTTGTTTTGTTTTGTTTTGGGGTTAA
CTAGATAGATGCCACTGCAGCTTTCGTCTTTTCAAAAATACCACTGCCATTCTGCATACA
TCTACAGATGCCACTAGAGCTACTTAAACGCATATACAGTGAAGATTGGAGGTAGGCGAA
TTTCCAATGCCGCCATGGAGAGGCGATGAGCGGAGGGGGATGCTCATTTTTTCGAGAGAC
AAGAAGGGGAATGCTCAGGAACTGCACTGAAATTTCGATCACCTCGCGTATGCTCCCTTT
GCTGTCAGTTGGGCTGATCAAAGGCCTTAGAAATATGTTACTTCTCCTTTACTAAATATA
AGATCTTTTAGTGATTTTACTACGAACTACGTATTTTACATACACAATCTTTAAAAGGTC
TTATATTTAAGAATGAAGGAAGTACTTGTTGATTAGCACATTGAATTCTTTTCTTTCCTT
TCCGAATTGATGAGGAGCAGTCGCCCCTGATTTTCATTTCCAAAAACCTGATAAGACAAC
GTTGTTCAGGATTACAATCCACTCCATCAGGGCGGCGTCATGACTAACCACCCAATCATC
ACGTTCTTGAATAGTAGACAACATCGACCATGTATGACTACAAGTTTCTCAGAGATCAGT
GACAGAGCACAGATCACACATAACTACACGACTAAGGGCATGGCCAATGCATAACCCTCT
CATGATGCCTCACAAATCATGTAGGATTGAATGTCAGGAAAAGAATTGCAACTCGCATCA
TGACCGGAGCATGAACTTGCTGAATACACCTTTAGAGCATGTACAACCGGATACGCCTTT
AGAGCATGTACAACCGGACCTTTCATATATGTATCAAACGTCTGGTCACTGACAGGTCAC
AAAAACACGATTCAATCGGACCTCTTAAACCCGTTTCAAACGTTCGGCTGACTGACACCC
CTCATATCCAACTCAAATCTAGGGCGGATATATGGCGGTCCGGTTATGTCTAGGCGTGTC
TGTCACGTCCTAGCTAACAGGCCCAACCCATCACCGACCCCATAGATGTCCCACAAACAC
ACTAAACCGGATGCCTCGCTCCGAACCCAAGCTCACTCTCTCTCGCTCCGTCCTCTCCTC
TCCATCTCCAATTCCGATCCCATCCACTCTGATGTCCAGCTCTGACTCCGACCTCAACTA
CGACGAGGAGCTGCCCATCCGCATTGCCTTGGAGCGGTCTAAGGTGGACACCAGCGACAA
CTCCGGATCAGGAGTTTTGGCGTAGCTCCCGCGCATGTGCGGGGCGGACGCCGGAGCTGG
AACCCCCGACCAACGCGCAGCTTTGCCAGGACAATGCAGTCCGCACCGTCTCCTTCCCCC
GTTGGCCGCTCCTTCACGCGGGCAGCTGTGGGTGCTATTACCCGGCCCGCTGCCCCGTAC
GCGCACACCGGAATCGGAGGCGCGTGCCACCCGACGCAAGAGGCAGCGGGCAAGGGAGAG
GGACGCGCCGGAGCAGTCTGCGTGCCGTCGCCGTGGGATGCAGGCGGAGTGCGATGAGGA
CGAGCGGCTCCTCACATGGGTCTACCGCCGGTCCCTCACGACGGCGGAGACAGACGATCG
GTGCCTCCGACATAAGAACACCGAGGCGCTCCAGCTTGCTATTAAGGTGGGGTTCATCGG
CTATCCCTCGGTTGGACATGGATAACCAATTTTCTAAGGGATGCCATCCGTTTGGTTTAG
AGGGATGAGAGGATAGGGATAGCCAAGATGCTGAGAATATTCGTGAAAAAATTGGTTGGC
AAGAGCGAGCAAAATAAGGCGGATGAGGGCAGCCACGTTGAGGTCCTCGTCTCCGCTAGC
TCCTCCCCGCCTCCGCTAGCTCCATCGGCGGCCACTCCGGCCCCGACGTCCATCTACGCT
GCTACTCGCCCCTGGCGCGGCCCCATGGCCTCTCGCTCCCCGATGGACTCCAGCCCGCCG
CCATCGGACCAGTCCTGCGTAAGCTCCCGCTCCTTCCGAGATGTGCTCTGCGGCCCTCCC
TTGTCGGAGCCTCGTGCTCCTCGACGATGGCCGCCATGCAATCAAGCTTTGTGTGCCTCT
GCTAGGTTAGGTTGCGGTGGGCTCAATGCCTCTCATCCTTTGAACTAAACAACAAAACAT
GGATATTAATTCAACCAATCCAATCCCACCCAACCAAACAACGAAAAATGATTATCCCTA
ACCAACTCGTTGAGGATATCCTTAGCCAACCTAGTCTCGCCATCGAACCAAATGCCACCT
AAGCAATTGGAGCGCGAGGCGAAGGAAACAGCGGCTCGGCGGCTCGGGCCGCCAAGTTTA
AGCGGGAGCAGGGCAGGGCGGTCCGTCGGATGAAGGGCATCATTGTCCTCTCCGACTCTG
ATGACAGCGGCGAGGACAACTGCACCTCCTCCACCTTCAGGTTCTTTTTTCTTTATCTGG
CTGAGCATCTACGTGAACGTGATCATTCTCATTATCACTAGATGCACGTTCACTACCAGA
TTATGTCTCCGCATCAGAAATAGAAACATCATTATGCTTCTTGACAAATTTTCTACAACA
GGTTCATTAAAAGTATGCAAAGTCCTATCACTTTCCTTTTTCTTTCTCTTTTTAGTTGAA
CTAGGCGCATCTTCATCAATTCTCTGAGAATCTTGTTCTATTCTTTTAGGATGACCTTTA
GGATAAAGGGGTTCTTGAGTTACTCTACGTCCTCTAGTCATTACTCTAACACCATAATCA
TTCTGTTTATACCTGGCCAAACGGACCGGGCAAAACAGGCCAGCTCGCGGGCAAGCTGGC
ACGACCCGGCATGGGCGAGGCACGACACGACCTAAACGGGCCGTGCCCGGCACGCGCCAT
GCCTTGGGCCGTGCCTCGGCCTGGAGGCTGGGCACACGGGCCGGCACGACACGAACCTTT
TATTATTTTTATATATTTCCAATTTTTTTAATATATAGATACATAATATACAACCCAATA
TGCCAAAAATTAGCCAACGAAGCTAAAAATTGCGGCCCAACATGCTAAACGGGCCAACAG
GACGACCTGTTTAGTAATTGGAGCCCACGGGCTGGCACGACACGGCCCGATTAGTAAATG
TGCCTCGGCGGGCCAGGCACGTTTAGCATAGGCCGTGCTCATGGCGTGTCGGGCCGCCCG
TTTGGCAAGGTATGTTCATGTTATCGTTCAATTCAACAAGAAAATCATTTTGTGACATAA
CAACTTTGTTTTTGAGGTGTGACATAGTAACTTGGTCTAGTTGAGTGTGGACCATAGAAG
CATATTTACCTAAACCTATAACATCATTAGCAATTCTAAACATCAAGTCACCCAAGCGAT
CTATCATCATAGCATTACGTTGTAACTGATCTTTAACATAATTATTAAAGTGCTTTTGCT
TGATAACGTAATTTTCAAATTCATTCATGCATTGACTAGGAGTTTTAGTGTAAGGTATAT
CACTTTCATTAAATCTATAGAGATAATTTACCTCTACCACGCGTGTCTGGGTATCAAGTC
GATGTATTTTTTTGATAAGTGATATATTCTCAACGTCTTCATATTTAATACCTTTATCCT
TCATAGTTCTCTTAGCTTCTTACATATCTTCTGGACTGAGGAATATAATGCCTCTTTTCT
TTTAAATAGGTTCCGGCGCCCGTGGGTTCACGAAGCGTCCAATTATCAGCATTTTGTAAT
ATACTATTCAATAATTCTTCAACTTGTCCAACAACTCGTTTCCTGAAAACACAACTAGCA
TAACTATCTAGGTAGTCCCTAGAAGGATCAGTTAGTCCATTATAAAAGATATTAAGTATT
TTATTTTTTTCAATAGGATGATCAAGGAAAGTACTTAGTAGCTGGAGAAGCCTCCTCGAA
GGTTGAGGGATATTCTCTTCTTCAATTTGCAAAAAAATAAATATTTTATGTAAAACAACT
TGTTTTTTATGAGGAGGAAAATATTTTTTTAGAAAAGTAATATATCATATCCTAGGGCGA
CGCACACAACGAGGAGCACGATTGAGGAACCATTTCTTAGCATCATCTTTTAGCGAGAAA
GGAAAAAAGCTGAAGGATATAGTAATAACGCATTTTTTGCTCATCAGTAAACAAAGTGGC
AATATCATTCGATTTAGTAATGTGTCCCACAACTGTTTCAGTTTCATAACCATGGAAATG
ATCCGATTCTACTATAGTAATAAACTCAGAATCGACAGAGAATTAATAATCCTTATCAGA
AACACATATAGGAGAAGTAGCAAATTTAGGATCATGTTTCATTTTCTCTGTCATAGGTTT
TCTGTTAGTTTGCATAGCAGTTTCTTCAAATCATCTCTATCATTACAAGCAAGAAAAACT
CTAGCTATCTCCCCATACATAACATAACCCTTAGGTACATCAGGCAATTCATATCTATTA
GGCGAGGTAGGTACAATACGTGATTCATAACCTTTACCAATTTCAGAATTTTCAAGTTCC
CTAGCTATTGCAATATGAGCCTGCTATCCCACAGACAACAGTGCCAGAAATT