morexGenes - Barley RNA-seq Database

Contig contig_137087
Source Contig contig_137087
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_137087 (7934 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location
Predicted Genes from contig_137087

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_6120	3	1611 bp	MLOC_6120.2	Available	Available	LOC_Os01g67160.1, FRAME:-2, EVALUE:0.0, 13101.m07283 protein cyclin-dependent kinase B1-1, putative, expressed
CDS Structure of MLOC_6120

Contig Sequence (7934 bp)

>contig_137087 7934 assembly3_WGSMorex_rbca.fasta
CTCCCTCCCCTGCCGCCACTTCCCTCGCCGCCGCCAACGAGATCCACTCGGCAAAGCCTT
GTGGTATTAGCGGCGGCGAGGATCTCAGCTCTAGGCGAGAGGGACGTGGAGCGGGGCCTC
ATCTCTTCAACGTGGTCAGGGCTCGCGGCGTCCTCTTCCCATGGCCCTTCCACGACGTGC
TCGCAAGCAGGCATCCCCATGGCGTGAGCCCCCGGAGTTGGCGTTGGCCTTCGGTAGGAC
AGTGGTTGTGTTGCACCTGGTGACCAGGTTGCACACTGGCAAGGGCGTGGAAGCGCTTGG
TGATGCCTCGGTTTGGCCCTAGCGATCTTCGTCCGCCGTGGCGCCTACTGTTTGACGTCA
ACCTCTTTGATCTGGCGCTGACGAGTTCCGGTCCTCACCGTTATAGATCCACACGGATTG
GCGTATGTTGCTCCTGAATATCTAGATTGAAAAGGCTCTGGTCGCGTGCGCTCATATTAT
CAGCCATAACGGCTTCAAGATGGCGCGGCGCGAAGCTTCGCTTTCTTATAGGAGTCATGA
GACATGTCTAAGTCAAGATTTTCATGGCACTGATAGAGGTGAAGAAAGTCATGGCGGCTG
TAATTGGAGGTCTTGAAGCGTTGACCAAAAGGTATAGTGGATGCGATGAAGATTGTGTGC
TAGGTGTTTTGGTGACTTGCAACAACGGCCTTGGCAAGCAGGGGCGGCAATGCTGGAGGT
CGGCAATTTCGGTGGTGCTCCTCAAGTACTGAGTCTCATTCCCAAGATGAAAACTCAAGG
TCTAACCTTCATTGGTTATACCTAATAATGGTCTTGTTGAAGGCATTGTTTTTGGGTGAA
CTCGGACTCTCTTCAGGGTGAAAACTCAAGGTCTTCGATCGGGCAACGATAACGGTTGTG
CATTGTTTCCTTTTTGGAGGTGTTGCTTTTGAAGAACCTTTTTGTATACCGGGTGTTGTC
TTCGGTGGTGGTTCGAGTGTTGTTGTTGCTAGGACTAATCACTATGGTGGGGCTTTTTTG
TGTTTTTTTCTTTTTGACTGTGTGTATCCTTGATGTCCTGACATCTTGTTGATACAGAGG
TCGGGTGTAATTGGTATCTTCGCGATATTAATATATTCTCTTTCTCGAAAAAGTAGTATA
ACTTCACATCACAGGAAGTCGTTAGACGGATGGATTACCGTTAGATGGATGGATTAGCGG
GATGCTGCACTTGTGCATGCCATGAAGGCACCAGGGAGGCCGTCGAGCACGACACAGCGA
CCGAGTGGCCCAGCGACTGGTGATTTGACCTAGGTTTTACGGGAAAACGAGTAGCGAAGG
CAGTTTTTGGGCGGGGCCTTCTTTATGGGTGGATCATTTTTACTTTTTTACTGAGCTGCC
AAACAATTCGGTGTATTCCGGTAATTCGGAGATCGTGGCCTTTTACCCGAAATACCCAAA
TTAAATTCGGGTTTCCAAATTTGACACTCGATATAGTGATCGGGTTAGGGCTTTGGGTTT
CGGGTTTTATGCCCACCGTAAGTCGGGAGCCAACCAGACAACCCTATTCCTTAAATAAGT
CAAACAAAAGTTTTTCTAGCATGACAAAGGCAAAGCGGTGTGCAATTTTAGCATGACTTT
TGCGGGAACCGGGCGAGCTTATAAAAATGACTTGTATTTTTTTTTGCAAACCAACCTATG
GTTGAATGATTAAAAAGATGATAATATCTTCTATCCACTAGAGTTCAAGTACCAAACTTG
ATATTAGTGTTTGTATTTTTCTGAATTTATTTCAGGTCTTCCAACGATGTGCGCTTGGTT
CGAGGAGACATTTCCGTCAAGTACGAAGACATCTGTGACAACTTAATCAATCTTAAGATG
ATGTGTCAGTTTAATCTCTTGAAGGTGCTCATAGGGTGTGCGTGTTTGAGTTCATAAGAA
TGAGTGTATGTAAGCGATTTCGATTATACTTCGCTAAAAAGAAAAGCTTGTAATTTTGGA
TATGCCCATTACAGAGTGCGCCCCTTAGCTGGCCAAACGTCCCCCTCATTTAGGAACGGA
GGGAGTATTAGCTCCTGCCACAGACACACGCCTCTCACCACTTCGCAGCTCCAAATAACT
TCACTCGTCGAAGCAACATTTTCTTGACAAATACTAGTAGGAGTACCTTATTATACTATA
CAAACAAGTCCGCAAATCCATCTCATCAAACAATTCCGTACAGAGCAAATAAAAAATCTT
CTACATGATCTGAAGAACAAGCATCTTCAGCCGATACTTCTCAAGACAAATCACCTGCTG
GAGGTTTAGGACATGGGGTTCACATGGTCATGGGAGCCAACTACTAGCAACACGGGGTTG
CTGGGTGTAGGTTCAAGAAACATGGGTTGGTGCGTTTTCAGCATCGATCTTACGGCGGAG
GAAGTTGGTGAGCAGTGCACACACACCAAGTTGAGAGAAATCACACGGTAGCTACAACAG
CTAGAACTGAGACTTGTCGAGGCTGTTGAAGTAGGGATGCTCTAGCGCGGCTTTGGCTGA
GATCCTGTTCGCCGGGTCAAACTGGAGCATTTTCTGCGAGAAAGAGACATGGAAATGTAA
GGCCATAGCTAGATATACTTGATTTTGCCTTGGCGTAAGAATGGAAAACTGAACTCAAGT
GCATCAAACTAATGTCCAGTGGAACTAACATCCTAATTGATAGAGGCGAAGTTGTCCCTG
TCTTTCGATGAGATGGTGGCTATCGTTTTTGGTGGATGACAGGGAATGGATGGTTAAGCA
TAACGCCATAACTTGAATTTATTGAGTTGGAGAAACAGCAAGCAGTAATAATGAAGCTCA
GTGCATGTTTAGTTTGACAGGCTAATGATTTTCCAGTAAAGAGAATGAAGGGTTAGCATT
TAAGCTTTTTAGCGTACCGATAGCAGGTCAATTCCTTCTGTTTCCAGTGTTGGGACTGCA
CGCGTCATTCTTTGTGCTTTCCACTGAGGAAACTCGTGCCAGTCCCTCAGAGCAGTTACT
CCAGGCCAATCCTCCTCGGTAGGAGTTCCCATCAGCCTGGTAAGGAGCAGTTTTAATTAA
CAGCTCAATGCGTGTACAATATAAATTGATAGGAGAAATATTAACTAATAAAATACGACA
TACAGTATTGTCGTACTGGTGCTAATTCGAATCAGAAGTTTTCATAATTGGAGCAAGGAC
TAACAAGGAACAGTTTGCTAAGGTCAGCATCTCAAATTGGGACAAGTTTTGTTACCGTTT
CCAGATTATGGCCAGCATCACATCATGGAAAACCCGGCATGTTTTTCGTTTTCAACAGAA
CAGGACAATAAATAAGATTGTTCTGAAAGTACTAGCAGGATATTCCTCCAACTAAGAAAA
GTAGTTTTATCATGATAAGTTGATAGATACATATTCTCAGTCCTCATGAGAAGCAGCAGA
GAGAGAGAGAAAGAAACCTGAAAATGTGAAGCAGTTGCTGTAACTCAGAGTCACCAGGGA
AAAGAGCCTGTTTTCTGACCATCTCGGCTGTACAGAATAGAGAGTACAAACATCAGATGG
TGCGGACAGGGAGGGGGTCCAATCAAAAGGAGAAAACATGTCATCGTGTAAGTTAAGGAG
AGCAAGGAAAAACTTAGGGAGTTAGGCAGAAATTCAAAAGCGTGAGGCTCATGTGAAATT
GGAGCTTAATATTTTCGTAGTTGACTCTTAACTGCAATACTTCATACTTTAAAGGCTTTA
TAATTGCTGCTATGGTAATATCTTCGTTCAAGCAAATGCAACTTCCACTGATCTAAAGCA
TAAAACCACTCATCTACTATTTCATTATAAACAAGAGTGACCATCAATTCCCTAGTGTAT
TTTTGCTGTGATTGTACAGGCGTGCTTTCTGTTTCAGTACAATTATATGCCACAAAAAAT
ACCTATGAAAACTTCTCTCAAATGTGAATCCAATGATGTATTTTTATGCACGAAACTTAT
ATTTTGCTAGCTAAATCGGTGGTCAAAGTTAGGCTCAAAGTACGAGGGTGACTTGTATAC
CGGTCCAGATGCAGTATTCAATAACATAGGCCAAAATTAAGGAATATTGGCGTACCAAAG
ATGCATCCAATGGACCAAATATCAACACCAGTTGAGTAATGTGTTGCTCCAAGCAGTACT
TCAGGAGCTCTGTACCAAAGTGTTACGATCTACAATACAAACATAGGGAACAGGACTGAG
GAACATACTAAACCATGATGATGAATTCTGTCGAACTAGTGTTCACTGTCCAATTTAACA
GATGAATAGATGAGTAAACAGTACTTCATGGGTGTAGCTTTTCATAGGAACAGTAAAAGC
TCTACTTAACCCAAGATCTGCAATTTTCAGTATCATCTTCTCCTTGTCAACCAACAGATT
TTGGGGCTTTAAATCCCTACGATATCAAAGAGGAACAATCACAAATCACATCTGCAACAG
TTGCAATGTTGTATGGGCTGATAAGTACAGCAACATAAATCAGAAAACAAAGGTCTAACC
GATGAAGGACACCATGTCCATGGCAGTGTGCAATTCCTTTGCATAACTGATACAAAAAGC
TCTACAAGAAAGTAAAGAAAGTTGTCTATTAGCCTGAAACAGACCTATCATAATTAAAAT
GGACTCCAACATCTGCTATCCAATGAAAATTAACAATAGCATCCTCAAAATAAAGGCATG
AAAATGAATTGATCCCAAAGCTACCAACAAAGTTAAGCTCTGGATTTGGAGGGGGCCCTA
ATCTGTACTTGAGTGTATGCAAAATACAGAATGCCAGCAGCAGTCAACATTGAGTTTCGA
CCATTATACTAGCACTTCTTAGTTCCTAATTTAGTCGCCTGCAACTAGGCTAGAGTAGTA
GAGTTTGCATATTTTTTTACGAATCCAAATCAACTACAAACGCGTACAACCATATGATGT
TCTGATTCCACATTTCATCGGCATTTAAAAGGGTTCAATGTTTTCAATTTTTTTCAATTT
GTTGTCAGGATTGGTCATGTCAATTACGAATTAAAATTTGCAGTGTAGTTCGCTCTGATT
GCGTATCAATGTTCCGCCCCTTTGCGATGCAAAACTAAGAATTCAGAATGGACATATAAG
AGGAAGTGCCCAAGTCCTCAGATCGACGGATAGGAGACTCGGCCGACATAGAATCGGCGC
AAAGCCAAGTGAGCAGAGCAAAGCAGCCACAAAACGAAGTAAATCCGCTACCTTGACGAC
ATGTGTTGGGAGTGGCTTAGGGGCGGGCCCACGGCGGTAGGCGTCGACGAACTTCTTGAG
GTCAGTGTCAAGGAACTCGAAGACGAGGTAGAGGACGGGCTTCCCTCCACCGCCGGCGCC
GCCGCCCTTGGTAGTCTGCTCGACGGCGAGGAGGCGGACGACGTAGAGGGAGCTGGAGAG
GAGGCGGAGGAGGGAGATCTCACGGAGCGCGGTGGGCGGGATCCCTTCGTCGTCCATCTC
CAGGCGGGTCTTCTTGAGCGCCACCACCTGGCCCGTCGCCTTGTCCATCGCCTTATACAC
CTTGCCGTAGGTGCCCTCCCCGACCTTCTCCAGCTTCTCGTACTTCTCCATGGCGCTTCC
GACGGTCCGAGTTCGGCGTCGTCCTCTCTCGATGCGGCCTGTGCGATGGGGGGCGGAGGG
AGGAGGCGCAAACCCTAGGTGGATCTGGAAGTTTTGAAATGGGATGAGAGGGAAAAGGAT
GGAAAGAAATGGGTCAAGCGACTGTGCGTGGCAGGTGGCACACTGAACGAAAGTGACGAG
TTGAAGATGGGCTGGGCCGCCGGGTGTTTCCCCAGAGCTGGCCAGACGGGCCCGCCCGGG
CACAGTCCATGCTAATCGTGTCGTGTATAACACGGTCCATCAAGATTCGATTGATAAACA
TGTCATGTCACGTTGGCACACGTGTTATACATTCAAGCCCAAACGCGACTCTTTTGCTAA
CCGGGTCGGGCAATTGACATGTTAGACACGTAAGACCACGTGTTTTTTGGTCGGATGGCC
TTTTTTTTTTAATGAAAACTGGACTTTCTTTCTCAAATAATGGTAAGATCATGTACAATA
AAGGGGGAAATAAAATTCGGGATTGAGCTATACGTTTGCTTCTTGAAAAGAATGGATCAC
CTCAAACTTAGATAGTTCTCCTCCAAGAGTTTTACATTCACATATGACAGTTGCTTTCGG
TCCAAAGCACTCCTTCTGATTGATTGCTTCAACATCATTTGAGCAGTCAGATTCAAACAT
CATTATACTACATCCCATATTAGCAGCCAAATAGAAGTTGTTTTGGATCGCCACCATTTC
AACTATTTCAGCACTCCCATATTGGTCAGGTGGCTTGATTTTGTGTCATTTGTGACAATT
TGTTGTTTTTAGGCTATATATGTATAAGAAATAAAAGCATGCATGTCGTGCCAGCCCATC
CTCTAGGTCAGGCACGACACGCTAGTGGTTGTGCCTGCGTGCTAATGGGTTGGCCTAGTT
GTCACGACACGGATGGCCAGGTATGCCCGCTAGGTGAGATGCTCGTTTCAACGAAATGGT
GGCTGCGGTTCGAGACTGCATCATGGCGACATCTCACGGCAGTGTGTCCGTACCATAGTC
AGATAGATGACCAATGAGTAGAACTGAGAAGAAAGATAAGATGTTCAGGTACGAGATAAT
GTGGGAGTCTCAAGAAAATTTATGACATTCATCAACAAGGCATGGAGCTCAACATAATCT
CTTCTCCTCCTCTTGAGGCCTACATAAAGACAATGCAATCATCCACAAATAATAAATGGG
AAATCCATGAAGTAACCCTTGTGGATGCAACATATCATGTTGCAGGTTACCATGTCGAAG
GGAAGTTACGAAGTGGAGTTATGACGTTATACTCAATCTTGCATGTGAGTCGATGCACGC
CACAAGACTAGAATATTATTCCACTACATGATTATATTGTAAGCTAGCCATGAGCTAAGA
ATGTTTGTATCGTAAAGCACTCGACTTCGATGTAAATACTACGACATGTCTGAGGGGTGC
CAGGAAAATATGTCCCAATTGTCCTAAAGGAAGGTGTGCAATGCTTCATCCACCATTGGG
TCCAGCTGTGTATCGATGGACGTCGTTTTATTGTCATCTATTGGATGCACTTGAAATTCG
ACTATTTCATCAGCTGGTTTAAATGACATAGATTTGGATGTCATCTTTATCGGCAGTTGT
GTCCAGCACCGTTAACTCCTCAACCGCAAAGGCCTCGGCTAGGGTTTCTGAGGCGAACTT
TGCCGTTTTATTCTTGACTCTATGTGCTCTGTCTCGGTTGCTTGCTATAGTGATCACGCC
ATTAGGTCACGCCATCTTGATCTTCATGTAGGCATAATGTGGGATGGCATAGAATTTTGT
GAATGCATCACGGTCCAACAGAGCATGGTAACTACTTTGGAAGGGCATGATACGTCTCCA
ATGTATCTNNNNNNNNNNNNNNNNCCATGTTGATATATTATCATTCTATAATACTTTTGG
AGTATTTATTTACTAATTTATATTATTTTTTAGCACNAACCTATTGACCCAGTGCCAAGT
GCCAATTGTTGTTTTCTGCATGTTTTTCACTTTCCAGGTTTTCAATACCAAATAAAGTCC
AATTGACGTGAAACTTTTTGATGATTTTTTTCTGGGACAAAAGAATAGCAACAAGCATTA
GAGGAAGTATGGGGTTGTGATAGTCTAGCTTATTAGGGATGATAGACTACTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGGAGCCCATTCGAACAGAACTCTCAAGTTAAACGTGCTCA
GGTTGGAGTAGTTCTAGGATGGGTGACCGACCGGGAAGTTATCCCGGGTGCGCAAGAGTG
AGGACAAAGTGCGTAGAAAAGACTAGTANNNNNNNNNNNNNNNNNNNTAGATCCCGCCAG
GAGTAACGACCGTC