Contig Data
morexGenes
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Map Locations of contig_137025 (4758 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_137025

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6072 2 1614 bp AK356097 Available Available None
MLOC_6073 1 345 bp MLOC_6073.1 Available Available LOC_Os02g44102.1, FRAME:+3, EVALUE:7e-15, 13102.m04910 protein remorin C-terminal domain containing protein, putative, expressed





CDS Structure of MLOC_6072






CDS Structure of MLOC_6073






Contig Sequence (4758 bp)

>contig_137025 4758 assembly3_WGSMorex_rbca.fasta
GCCTTCGTCACGCACCGCCTCCCCTACCGCTTCCCCGACCTGGCGGTCCTCGACCTGTTC
CCGGCCTCCATGGCCGCCCCGGCCTCGCCGTCCCGGGCCTCCCCTGTCCTCACATGCGGC
GCGGTCTCGCTAACCCTAGACCCCAGCGCCGACCCGCCGCTCGGCGCCTGCCGGTTCCTC
CCCGACGACGTGCTCGACAGGGGCCTCGCCGTCGTCGCCGCCAGGTTCCCTAACCTCCGG
CGCTTGTCGGCCACGGCCGCGTCCGAGTCCGCTGGCCTCATGGATATCGCCGGAGGCTGC
GCCACGCTGCAAGAGCTCGAGCTCCACCGATGTACTGACCTCGCCCTCCGCCCGGTCTCT
GCCTTTGCGCACCTCCAGATCCTCCGCATCGTTGCCGCTTCCTCCCCGCTCTATGGCACC
AGTGAAGATGGCGGGGTAACTGACATCGGCCTCACAATCCTCGCCCATGGCTGCAAACGG
TTGGTTAAGCTGGAGCTTGCGGGTTGCGAGGGCAGCTACGACGGCATCGCTGCTGTGGGA
CGGTGCTGTGCGATGCTGGAGGAGCTCACCATTGCTGAACACAGGATGGACGGCGGCTGG
CTTGCTGCTCTAGCTTTCTGTGGCAACCTCAAGACTCTGCGGCTCCAGGGGTGTGCCAGG
ATTGATGATGATCCTGGGCCCGCCGAACATCTTGGCGCCTGCCTCACGCTTGAGAGCCTG
CAATTGCATCGGTGCCAGCTACGTGACCGCCACGCCCTCCATGCTCTCTTTTTGGTCTGC
GAGGGTGCTCGCGAGTTGCTCGTCCACAATTGTTGGGGCCTTGAAGACGACATGTTTGCG
TTGGCTGGCCTATGCAGGTACTGCAACCACCACTAATCTGACCCTTCAAATGCATTGGCA
CTAGTTTCCTAATAGATTATCATGATTGCTTCTTATGGGGACAGTTTGTGCCTTCTACTG
TTTAATTATTCATGCTTTTTGTATCTTCTGTGATAATGACATGCTACCAATAAAAGGAGC
CTTATAGGTATCTAACGTTCGGATGCTCTGACATTGATTAAGTGCCAGGGGATAGAATGC
TTGCAAGACATGGACCCCCTGCATGATTAAATTGACCATTGCTTCTTTGGAGATTTGAGT
GATAAATATTAACTATCTTGAGGATTAAGTGGCATTCTGGTTGTCTGTGAGAGTGTTCTA
ACAACCAATTCTAAGATGACATTTGCTAGCAGATTTTTATGGTTACTTGTGGTCTATACC
CTTGGTATGTTATCTTGTTACAAGTATTGTACACTAGTTATCCTTTTGCTCTATTTTCTT
TTCGTGTTGTTAGTTGTTTAAAGAAAACAAAATTACAATCCCATAGATGTAGTTAATGTA
TTCAAGTATTCAAGATTGATGTTTTATCTGATGATATATTTAGTGTGTTGGGTGCACCGA
TTTGAAGGTGTGTGCTTAAGTGAGACCTTTTTCTATATAAATGACATTTGCGCATGATGC
CATTTCTTAGTATGCTTCCTCTGCTGTTGATAAAAGCTTCATCCTGAAACTATTTGTCAA
ATGCTCATCTGGGTAGCTGAGTGGCTGTTCCACAAAGGTCGTCAATAGTTTCTTATGACC
AGGCACTAGTAACCTGTAAAACGTAAAACCTGACCTGGATTTCTGCATAATTTCATTGAT
TAGCGTATAAGTTACTTCTATTTGCACCACAAATTAGGCTCCATTGCCAAATGCCATAGA
GTTCACTTTCATGGGGAAAGGAAGCAACGGATGGCTAATCTTGCACCTGTTATATATTTG
TGCGTATATACTGAATACTTAGATGTTCGCAGACCACTGGTTGCCAGTTTTCTAATTTCA
TGGTGTGGTATAAGGCTTTGTTGTTGTTCTTGTTGTTGGTATAACGGCTGAAAAGTGGAA
AACATTAGCGTTAATGTAGCTAAGTAGGATTTGGTAGATAATTGCCCTCACATGAAGAGA
TTATTATGCCATTAGTGTTCTTCTGCAGTTCTGCTGTTTGTCAGCTATTTCTTGTTTGCA
TTTAATTAGTCATCTGAGTAAGTGCTTCCTAAAAGTGGCATGTTGCTGTTTCTCTCTGAG
AATGGAATATACTTCCTCATCTTGTCGAGTGCAATTATTTCGGTCCTGCCCAGGAAACGT
CTTAATATCCAGCTTGTCTGCCGTGTAGTACTTTTTTTCGTGAGTCTGTAAATGGAATCT
ACCAAGTCGTCAACTATTCTAGCTTGTTTCCTGGGTAGTGCATTTTGTGCCATTCATTGC
TGCTCTATGGATTACTGAAGTACCTAGATTTCTCAATATAATACGAAGCTAGTTAACTGG
TGGGCTAGAAAAAATGAGACGAACAGGGACTATCCCCCGTGGCAATTTTATTAAGAAGAA
ACAACCAGGCACACAACCTGCAGAGCTTGGGGCTCGAACGCGGGTGGCAGGCTGAGCGTG
CAGCAGACCGTGCGCCATTAGCCAACTGGTCGATGCCTGTTCCCAACTAATGGGCTGAAA
TGAACGGCTAATAACCAGACGCATACCGTAAAATAGGCAAAAGCTGGTAGGGCGACCTCA
ACGCCAAACACAACTTAAGTTTGCATCTGGTTATTAGAACAAACGGGGGTTGTTTTTGGC
ATTGAGGTAGCCCTACCGGTTTTTGCCTATTTTACTGTTTGTAACCAACTTTTTTCTGCT
TTCATGGTAATTTTTTCACAACAGATTACTCCCTCTGTTCCTAAATATANNNNNNNNNNN
NGATTCCACTACGGACTACATATGGAGCAAAATTAGTGAATCCACACTCTAAAATATGTC
TATATACACCCGTATCTAGTCTGTAATGTAATCTCTAAAAGGACTTGCGGAGGAAGTATA
AAATAAGTTCAGGGCAACATAATTCAGCAACTGCATACCGAGCCTATTAAACTGAAATTC
ATTGAACTTCAGGCTACCTGGAAGTGCTAGTACAAAACAATCTTAGTTTTTTTGTGTGTG
GATATTTTGATATTTCCTTATCAAGAAATCTGCTTTCGCTGCAAGTGGATGCCACATGTT
GAAAAAAAATCCTCTTGTGGAAATGCTTTGGCATATGACATTCCACAGCCTACGTTTCTG
GAAACTAATATTTATGTATTGCAGTATTGGATATACTATAGGATCTTGACTAAGGTCGTC
TCACTCATTTTTCAGGAGAGTGAAACTCCTGTCCTTGGAAGGCTGCTCATTAGTAACAAC
TCGAGGACTCGAATCAGTAGTCACCTCATGGAATGATTTGCAGAGCCTACAAGTTGTCGC
GTGCAATAAAATAAAGGACGAGGAAATTACCGGTGCACTCTCAGAGCTTTTTTCTAATCT
CAAAGAGCTGAAGTGGAGGCCCGACAACAAATCTCTCCTGGCGGCAAGCCTAGTGGGCAC
TGGAATGGGAAAGAAGGGCAGAGTATTTTTCAAAAGGGTATGAAGTCTGATCATCTTGGT
GCTCCATTCCCTGCGATGATGCGCTTCATCTGTTCTTTGCCCGTAAGGATTGAGCTTTTC
TTGTGGCAGATTTTACCGGGCCATCAACGAGTCAAAGGCACGATGCTCAACTATCCAGCG
GGTGTTGCTGCTTAGTCTGATCACGCTTTTGGTCCAGACAGAATGTTGTGCTGCTGCAAA
ATTCTTATAATTGGGAGCTGGCGCAAATTCTTTGGATTGGGATCGAAGTTCTTCATATCT
GGAATCTGGCACGCCCAGGGGCAATTGAGACACCAATCACCCAGATTCGTGTTTTTGGCA
GAGTATTAGCAATCTGACACTTCCCCATGAGGATCCTAACCAATATTTATGTACGCCATG
GATTTTTTTTCCTTCATAAGTTATGGCGGAATTTATTAGTTCCTGATGATGAAATCAGGC
AGAAGTAACAAAAAGTGTTCATGTTTTACATCACATGAATCGAGTGTTAAATGGTTCTTG
TTGACTGCACACTTTGCAGTGAGGAAATACTTTGGTGGTTACTCTATGCAATGTGCCCTT
CGTGCTAGTCTGAAGGTGATGCATTAACTTGGTTTGTCAAGAGCGCCGCTAAAAACTCTG
CCAAAAACCGCTCAGATTCGTGTTTTTGGCAGAGTTTTAGCAGCAGTTCTTTCTCTATGT
CTCGAACAGGAGAAGGATCTGCAAAAAAAAAAAAAAATAGAAAAAAACGAACAGGATAAG
GAAGCGCAAGGGCCTGACGGAAGCACGACCAGCCCGTCCCATCTGTCGGACGGCCCAGCC
CATAGCCCACCTCCCATCATATAAAGCCCATCGGCACCATCTTCTTCGGCTCTCCTCTCC
CTCAATCTCTCGACTCGCGCGCCCTCTGCAAGACTGCAACTGCCAGACGCGCCCCGCCCC
GCCCCGCGGCAAGAAGAGGCGAGGTGCGCAGAGCAAGAAGCCAAGAAGATGGCCGCCGTC
CTCGACGGCGTCTCCTCCTGCGGCAGCATCAACATGCGCCGCGTCGACCACCTCCTCCCG
CTCCCGCTCCCCTGCGTCGGCGAGTCGACCGCCGCCTCCCGCGTCTCGCCGGGTTCCTCC
CCGGCCCGCTCTGACGCCTCCGAGGGCGCCTCCGCCTTCTACGCCGATCCCGACCCCGAC
CCGAATGACGAGCCCGAGGCGTCCGCGGGGAGGAGCACGCAGATGCTGCTCGCCATGGCC
GCCATGGGCGGGCGCGGCGGCCCCTACGGCCGCCGCCCCGCCGCCCCCCACCGCCGCCGC
CGCCGCCCGGTGCGCCTC