morexGenes - Barley RNA-seq Database

Contig contig_137011
Source Contig contig_137011
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_137011 (7588 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_137011

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_6059	2	3031 bp	MLOC_6059.2	Available	Available	LOC_Os04g53760.2, FRAME:+2, EVALUE:0.0, 13104.m05545 protein kinesin motor domain containing protein, putative, expressed
CDS Structure of MLOC_6059

Contig Sequence (7588 bp)

>contig_137011 7588 assembly3_WGSMorex_rbca.fasta
GTTTCCCCCTCCCCCCCTCCATCCATCCATCCCGAGAAAGCTCCTTTTCCCCCACCCACC
TCCACCTCCACCGCTCCATCGCCACTGCTGGGGAGCACAGGACAAGAGACGACACGCCGC
TCGCTCTCCACTAGTAGTATTAACCCCTAATCCACCTAGTAATAATCCCCGGCCGGCCAT
GGCGTCCTCCCTCACGCCGCGCAGCCAATTCCAGGTCACCCCTCTTTCTTTCTTTACCCT
TTTCTTTCTTCCTCCCGTGGATGAATTTCTTCGATCTGTTCCTGATTTCTTTCTTGGTGG
TAATGGTGGCGGCGCAGAAGAAGGAGAACCTGGGGAACGCGCGGAGGGGGATGGGCTACA
ACGCGCCGCCGCGCCGCAACGTGCTCTCGGCCATCAACAACGGCGGCGGCGCCAACGCCG
ACCCGGCGCCCTCCGAGGCCGGCTCCGAGGCGCCCGCCTTCGAGTTCAGCGGGAGGGACG
ACGTGGACCGCCTGCTCAACGAGAAGATGAAGGGCAAGTCCAAGAACGACTACAAGGTGT
CCCATCCTTCCGGGTTCCTTGGTTGGTCCGGGGTCCATTTCGTTGCAGATTCGTCCTGCA
AGGGTTTCCTCAACCCGCTGGATTTGTTTCAGGGGAGGACGGAGCAGATGAGCGAGTACA
TCAAGAGGCTCAGGGCCTGCATCCGCTGGCTGGTGGAGCTGGAAGACGGCTACTTGGCCG
AGCAGGAGAAGCTCCGGGGGCAGATTGATTCAGACAATGCTCGTCACGCGGAGTTTGGTA
AGGAATTCGAATCTATGATGCTCATAACTCCTCCCCGTGACTCTTTGATCTTGTCCAGGG
TACAAGTGACTCATTTATGATGCCACTTGCGTGCTCTTTCCTCATCAGTTAATCTGGTGG
TGTAGAACCTGTGACCGCGTTCTTCAGCACTGCATTATAATGCTCCTGCTTCATCATTTG
CGTCTGTTTGGTCTTTTCACCAGAGAGTAACAACTGAGCCATGTTTAGTGCCTTCTTACT
GTTCCGGTCACCAGCTTATAATTTGCTGGTGTTCAACCGTCAGTGATGTTGGTTCATAAA
AATGCAAAAGCTATAGATAGTGCCATCTTATCAGAATTTGATTTTTGTTGGATTTCCTCT
GCAGAGGCTCAGCTCAGTGGCGCGCTTGAAGAGTTGAAAGCTGCAAACTTGGAGATGACA
ACACGGTGCGACTCACTGGAGGAGAGCCTGAACAAGGAGAAGGCCGCCAGGCTGGTGAGA
ACTACCACAACGCTATTATGTATCTGATGTGATACAGACTTGAAGCACAACTTTAATTTC
TCAATTTCCAAACTGGCAGCTTGCTGTGGAATCCTATGAGAAGGAAAGAGAAGAAAGGGA
ATCAGCCGAGGCTTCACGGGATGTACTGACGGTCGATCTTGAAAGGGTCACTCATGAGGC
AAAGCGGTTTAGTGAGCAGGTAGAAGTTCAGATCATGATGTCTTTACATGAGCCTGTATC
CGTAAATCCTTTTGCTGACTGCAAAATTTGTGAACCAGCTAAAAATGGTCCAAGACACCA
ACAAAAGACTTCAGGAATACAACTCCAGCTTGCAGCAATACAACAGTAATCTTCAAGCTG
ATACATCTAAGAATGGAGAAATCATCTCGAAGCTGCAAAGGGAGAAGAGTGCAATGATGG
AAGCCATGACTAATCTGAAAGATCTCAACAACTCAATGAAGAACCAGTTGGATTCATCCA
TGGTGAGTTTTGTTTGTGACATGTACAAATTGCAGTTTTCAGTCTTCAGGCTTAGTATTT
TGAGTCAACTCTTTCTTTCACTTATAGTTTGCACAATCTATTATATACTCTACAGTCCTC
CCAGAAAGAAGCAATTAGAGTGAAAGAAGAACTTAGAAAAGAAGTAGAGTGCCTCAGAGC
TGATTTACAACAAGTTAGAGAAGATCGTGATCAGTCTGTTGCTCAACTGAATACCTTGAC
CGCTGAACTGGCCACTTACAGCGAACAGGCTAAAAAGTCTTCAAAAGACTCTGAACTTTT
GCAAATAAAAGCGGCAGCCTTTGAGGTTTGTGCTTTCAGTTCATTTGGTTAATTTTCATG
TGACTAGTTGGCTAGACATTATGCTTCTTCTTTTTTTGCGAAAGGCTTACCATTATGCTT
GTCCTCAGGAAACATGCAGTTCACAGCAAGAGCAAATTGAAACATTGCAGAAGCAGCTTG
CAGTTGCAACCGAGAAGTTGAAGGTTAGAAAAGCTTATTTGTAGCTCATGAGTTTTTGCA
ATATATAAACATCCTTTGAAGATTAATATAATAATTTGCTTACGCAGCATGCTGATGTGA
CTGCAATTGAGGCGATGACAGGATATGAAACGCAGAAAGTGACAATTAAAGATCTGGAAG
AGCGTTTGGCACATGCAGAGTTTCAAATCATTGAAGCTGACAAGCTACGAAAGAAGCTGC
ATAACACCATCTTGGTAATACTTACAAAGCAGTGGCAGGGGATGGACTTATTCTGTTGTA
GAACAAATTATAAACAGATTATTGCAATATTATGCAGATTTCTCTCTTGGTATTGATGAT
GTTCTTTGTTTTGCAGGAACTAAAAGGCAATATCAGAGTATTTTGTAGGGTTCGACCCTT
TTTATCGGACACTGATTCTAATGGTCAGGAAGAAGCCATTATTTCTTATCCATCATCTGT
GGAAAATGCTGGGCGTGGTATAGATTTAATAAATCAAGGTGAACTATGCTACTTCAGGCT
TTTTGCTGGTTATACTTAAGATAATTTCCTGCATCAAATCTAACGAAACATTATGCCTTT
GGTTTTGCATTTGTAGGCCAGAGATGTTCTTTTTCATATGACAAGGTTTTCGATCACAGC
GCTTCGCAAGATGATGTGTTTGTGGAAATGTCACAGCTAGTTCAAAGTGCGCTTGACGGA
TACAAGGTAATAATCTTTCAATACAAAGTTAAGTGCTGTTGCCATTGCTTGGTTGCAACT
TGTAAGTGGCATTCATTTTCTTGTTGTAACTAGGCCGTAGCAGCGTCTGTTAGAACAGTT
TTATTTAAGTATCTGGCTATCTGCCATATTCCAATAGTATCTGTGTTTTTTCCACCACCA
CCACACATAGAAACTGCAATTTGATATGCACATTCTTTTACAAATGTTTATTCTTGTGCT
TTTGTGGTATGTGAAAAGATAGCAAACTAATCAGGCACATTCTAATCACTTCTGTGTCAC
TGTCATCCTGGAGGCTTAAGCTTATTTATAGATTTCAAGACCTATATTATTTGGATGCCT
CTGCAATTTTTATTTCATTTCAGTTAATATGATAGCTGTTATGCTTAATTTACCTTTGCA
TGGTACAGGTATGCATATTTGCATATGGTCAGACAGGGTCAGGTAAAACTTATACAATGA
TGGGTAAGCCAGGCCGTGATCAGAAAGGTATCATACCTCGATCTTTGGAGCAAATTTTCA
AGACCAGTCAGTCTCTAGAAACCCAGGGATGGAAGTATTGTATGCAGGTTAGTCCGTGCA
TTACATTGCAATCTAACTCCTGCAATGATATATTATCCATGCTGCTACTAAGACATTCAC
ACACAGGCATCAATGTTGGAAATATACAATGAGACAATTCGTGACTTGTTAGCGCCAGGC
CGCTCCAGCAGTGAGATGCCTGGCGGTAAACAATACACAATAAAGCATGATTCCCAGGGA
AACACAACGGTCTCCGATCTTACTACTACAAATGTGTTCAGCACTGCTGATGTGACGTCT
CTTCTAGAGAAAGCATCCCATAGCAGGTATACCATTCGTTGCCGAACAAAAAGCTTGTGC
TGAAAAATTATGTTGCGAATCTGATGCGATGCACCACATTTACACAGGTCTGTAGGTAAG
ACCCAAATGAACGAGCAATCTTCCCGGAGTCATTTTGTCTTTACACTAAAGATATTTGGA
TCAAATGAGGTAGGTCACTTCTCTCAGCTTTGAGCGTAAGAAACACTGTCCGAAACTTCA
CAAAATCATTAGCTACCGACATTTTTACAACACAAAATTGTGCACACGTAGAATTTATCA
AGAATTGCTATTTTTTCGAAAGGTTATGCATACCAAGTGAACACAGATACTGAGAACTGA
GAGTAATATGGTGCTTTTGATCTGGTTGCAGAGCACAGGCCAACAAGTACAAGGTGTACT
GAACTTGATTGATTTGGCCGGGAGTGAGCGTCTTACTAAAAGTGGTGCAACAGGCGATCG
CTTGAAGGAAACTCAGGTGAGCAGTTGAGCAAAGATAACTATGTTGTTGGGATTTGGTGA
TGATGATGCCATGGATTTAACCGTCGTGTTTGTTGATGTTTCAGGCCATCAACAAAAGCC
TGTCAGCTCTCAGCGATGTTATCTTTGCGATTGCGAAGAACGACGACCACGTACCCTTCA
GGAACTCGAAGCTCACGTACCTCTTGCAGGTGAGTGACCCCTCTGCTGCATAACTAACCA
CCACCATATATGTATAAACGACCTGCACTCAAACAAACTCTTACACCAACTTGTTTGTGC
ATTGCATTGCAGCCTTGCCTTGGCGGGGACTCCAAGACGCTCATGTTTGTCAACGTCTCG
CCCGAGGCGACCTCGGCCGGGGAGACGCTCTGTTCCCTGAGGTTCGCGTCGAGGGTGAAC
GCATGCGAGATCGGGGTGGCGAGACGGCAGACGCAGTCCAAGTCCTCATCATCGGATAAC
AGTAACAGGCTGAGCTACGGGTGAACTCTGCCCTGTCTGTCAATGGCCATCGTGGCCTGA
TGCTGATGTGATACTGCTACATAACGAGCTAAGCTAGCTAGCGGCTCTGTGGGCCGACTT
GGCCACGAGTGTGCTGTGCTGGCGACGCGGAGCGGCTGGCCTCTGGCATTAGTAACAATG
TACAGTCAGTAGGGAGAGTGGCAGAGCATGCGCTGTGGCATTGAGAGCAGGAGAGAACTG
GCGCTACTTGCTGCTACGATGATTGATCTTCTGTTTGTTTGTAGTAGCTGATTGATTTGA
GATTTGAAAAGTAATGTTAACTGGCGCTATATTCTTTCTGTGTGTGAGTGCGTGCTGCAG
CTGGTACTTGTGGGTATCTTTTGACCCGCCGATGCATCAAGGATGAATCCATGATGCTGA
TAATATGATTGCGCGTCCATCGGTGTGTATGCCACTCCGTTTTGTGAAGGGCGGAGCCAG
GATTTGATCGTAGGGGGAGGAACTCTATTTTAGGCGCAAAAATTTGTGACTACATATGTG
GGAATTGGGAATTCTTCAGAAAAGGGAATATAGGGTTCCTGGCTGCATTGTTCAAGAATG
ACTATTGAGTTTGTGTTAATGAGTCCTCCCTCTCCGATTTTCATATAATGAAATTAACTG
GAATATAAAAAATGTTCATAAGGTTCTACTCCCTCTGGATAATAAGATACTCCCTCCGTC
CCAAAATTCTTGTCTTAGATTTGTGTGGATATGGGTGTATCTAGTCACGTTTTATTATTT
AGATACATCCATTTCTAGACAAACCTAAGACAATAATTTAGGAACGGAGTATGTCTAGAT
GTATTTAAATATGTTTGAAATTAAAATATGTCTATATGTATTTATCTCTCGGACAAGTAT
TTTTGGATGGAGAGAGTATTATAGACCCACTGAGAGATCAACCACATCCTGCCTAAAGCG
GGATCGCAAAAAAACATCCCTAAAAGGGAAACATTCAAGAATGCTAAACGTACAAAAAAA
GGCTGGGTTCTCTAGGCCAACACCCATGCGAAGCGCGGTAAGGCCAACTGCAGCGCGTGA
CCCCATCTGGACGTTGGTTTTGCCCGGATTCTGTCCGTTTGGGGCGGGTGATGGGGTCGT
GTCCGAGTCATCTCTAGGATGCGGTGGTCGTGCGTCCAACGCGCGGACGCATCCTTGGCC
ACATTATGTCCGCCTCATTTTCAAACACATATCGAATAGCCATGGCCCATAGTTCATCTA
AAGCGGCCCTAGATCACGCCGGCAACACATCCAGCCTATACGTCCTCGTCAGCAACACAG
CCAGCGGCCGGCAACACAGCCGACCTCCAAAAAAGAATAGGTTTTTCGCCGGCAACACAG
CGAGCGGCCGAAACACCATGCTAGCCTCGAAAAAAAAGAACGACCAAGGCCGATCTGACG
CCCTAGTTCAGGCCATCGGTGCCGAACATCTCTTCCTGCCGGGCCTCGAACTAGCTCCTT
GTCTTCTCGCTCATCTTGCTCAACTCCACGCTCATGATCGCCAGCGCCAGCTCCTTTGCT
TTAGTTGCGCCATTGGCGGCCTCGATGTCGAGCTGCCTCTGCATGGCCGCCTCCTCGATG
TCGAGCTGCCTCTGCTTGGCCGCCTCCTCCATGTCGATCTTCCTCTTCTTGGCCGCCTCC
TCTGTCTCAAGCTTCTTTGTTTGCAGCTCCATGTATTGCTTCATTTGCTCCTCCTTGCCT
TGTCGCTTCTTCTCGTCCCTCACTTCCTTTTGAGACATCACGCCATGCAAAGTCTCATGC
AAAGCATACGATGCCGCATCACGCTTGTCGTCCACCTTGGTGTTGGTCTTGCCCCCGTCA
ACCCTACCATCTCCACCTCCGGCCAAGGCGGCCGCCTTCTTGCCTCTCTTCCTTTGAAGC
TCACGGTATTGATCTTTGAACTTAGGGCAATTGTTGATGATTTGCCAAGAATGCATGAGA
GTGGATGACTTGTCGTTGTACCGGGCCATGAATGCTTCCAAAGATTGAAATGCCTACAGA
TCAACAACTATTGGACATGCAAACACAATTAATCATAGAGGAGGCCGAGGCATGGCCGTA
GCAAAGAAAAGAGAAGAGGCCATACCATGTCCTCGATGCCAAGACCACTCACGGGACGTG
CTTCAACGCTCTCAAGTGCGGCGCAATATTTGTTGCATTCTTGTTGGATGAACAACCACC
TCTTTTGAATCGAGTTGATGTNNNNNNCGCTCGTAAATTGGTAGGGCGGAAATGACTTTC
TTTCATGGAATGTTTTATGAACTCTTGTCCAAAAAACAATTCCCTTNNGTTGCGCACCGA
CTCTAGGATCTTGGCCAATCTCCTTCCAAATTTCGTATATCAACCCGTCCTCATCTTGTG
TGTATGATCCTGTATGAATGCTCTTCTTCCTCATTTGAGCTTCCACTCTTTGGGTGAGCT
CGCCGGTGAACAATGGCTCGCCCGAAATATCGACGCCGTCCTCTTCTTCATCACCTTCGC
AATATATGTCATCTTCTTCATGCCACGAGTCACCATGGCCGGCCTCGAAGTATTCATCGG
CCATGTACTCGTCGCGGCCATCTTGACTCTGGGTCTCCTCCGGATCGAAGGTCAAGCCTT
GCCCACCCGTCTGAAAAGCCTCGCCATGGCCGTCGAAGATAACATTCTGCATGAACTAGC
CGTAGAAGGGGTCCTCGACCGTTGGTGTCTGTGTTGGCATTTCGCGGAATGGTGCGCGGT
GCGACGACATGGTGGTCGTAGACGGCGACCGGGCTTGCTTTCTTTGCATCTCGACGGATG
GACGGCCGCCGCTGCAGGACCCCGGCGT