Contig Data
morexGenes
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Map Locations of contig_136973 (5951 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_136973

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_6007 2 2558 bp AK376112 Available Available None
MLOC_6010 1 377 bp MLOC_6010.1 Available Available None
MLOC_6008 2 840 bp MLOC_6008.1 Available Available None
MLOC_6009 1 517 bp MLOC_6009.1 Available Available None





CDS Structure of MLOC_6007






CDS Structure of MLOC_6010






CDS Structure of MLOC_6008






CDS Structure of MLOC_6009






Contig Sequence (5951 bp)

>contig_136973 5951 assembly3_WGSMorex_rbca.fasta
ACTACCTCCGTCCCATAATATAAGATGTTATTACAACCAATATATGAGTACAATGGTTGT
AATAACATACTCCCTCCGTCCAAAATAAGTGTCTCAAGCTTAGTACAACTTTGTACTAGA
TCTGGTACAAAGTTAAGACACTTATTTTGGGATGGAGGGATAATAATATTATGGGAATTA
CTTGCACCAATTGTGTGATTCACCTTTGTGTTTAGTATCTTGAAACAAACACCAAACATC
CCATCCAGTTTCCCAGCTAGTTTTTGGCAGCACAGTTTTTCCAAAATCGTAATAATCTAA
GCTTAGTATTCCATTGTATGGGCAATGAATACTTCAGTTTCTAAAAACTGCAGTTTTTCT
CGGTTTGGTTTAGAAAAAAAGTGAGGTAGAAATCTCTTTTTCAAACAGTACCAAAAATAT
ACAGTAGTTGAGATACTGCGGTTTATGAATCTGTTGTATTTGTTGATGCCAAACACATTG
ACGTATTTAAAACCGTGGTTTCTAAGAAAACACAGTATTCTCCTAAAACTCCAAAAAAAA
CTGAGCTATCGAAATAGCCTGCCTCTTTTTATCTACGCATCACTAGTTGATCATTTTCAG
ATTTGTCCTTCATACTTTATTGCTTTGCTGAGCTAGTATATTTTTATTTATACAAAAGCT
CATTACTTGATAGTGTGTGCATGTGTTGGTGTGTTATATTCTGTATTTCCATTTTTTCCT
GTGCTTATTTTTTGTAGCAATTGTTCCTGGTTACACCAAAATATAAACTCTGAGCTGTTC
GTGTCTTCTCTCGCAGGTGTGTTGTTTGTCTTGCAGAATACGAGGACAAAGATGTGCTCC
GCACTCTTCCTTACTGTGGCCACAATTTCCATATGGTGTGCATAGATGCTTGGCTAAAGC
AGCACTCAACGTGCCCAGTCTGTAGAATTTCACTGTCTGACTATCCTGATATCAAGCATA
TTGCGCCTCCTTTACCAAGTGCAGTGGTGATACCAATACCTATACCTCCTTATTCCCCCG
AAGCATCCATATCGGATCCGTGTCATTGCCTGTTTGTCGGCACGGGGCATTCGCCAAGGC
CATCGGAGGTTCTTCAAAGCGAACCCGACCAGGCGAATCGGACAGTACCCGGTCCATCCT
TGGATGGGCCAAACAACTTGACGTTGTCTGAGGTTACCTCTCCTGGCGAAATAACAACGA
AACAGTAAAACAGCACATGGAGAGTCCTTGTATTCCCAGCAGGTCGTGATCTGCCCAGCT
AAGCCCCCAGCAAGTAGCTGTTTGGAGTTTCTTTTGTGCCGTGTGTTGCACGGTGCGGTG
AACAACCTGTAAACCTGGAAACATCTGCCCATGTGGATGTCTGTTATAGGTTAGATTTCC
GCGGGTTCGATGTAAATATGAGAAATCTTTGGGTTTCTTGTCGAAAAGCCACACATTTGC
TCGATAATTTCACTGAAAACAGTCCATTATATCCATCTATGGTAGCCCACTGAGAATTGT
TGTAGGAACATCATCATCAGTGCATTGCATGTACCAATGCTGTCATCAAACAGGATGGGT
AGGGCATCTTGATTTGTTGGTTGAGATGACTGTCTTAATGCAGATGAACTGATGAGCTAA
CAAACATGTTGACAATGTCGTGCTCATGCATCCATAAGATAATTCTTTCATGAACAGCAT
AAAGATTAGCTGGTGTACTGTTTGCATCCACTTGGAAGCAGCAGCATGCTGCTTGCTTCA
GTGACCATGGTTAAGTGACCCAATTGCAATTGGCTGGTTTGAGGTTAACTGACCTGCACT
GCAGGGAACTGGAACCAGTACAATGCTGCATGATTCTGATCCAGAATTCGGGATCACAAC
ATCTAACTCCAGAGTCCAGAATGATGATACTTGTTCCGAAAGGAGACCCCTGTGGGCCCT
GACACACCGATGTCGGGCCAGTGGGGCCCACTCATGGCTCGTGGTAGATCTAACAGTGTG
CTCAAGAGTCAAGACCAACAGCAGAGACATTGTCTACAGCTACAAGTGTGCTGCCAAGAA
GAAGAAAATAAATAAATAAATAAGCCTATTTACAGTGAGTGATTCCTGTCGGTGGTGGTG
GTGGCCCTCACCGGAGTAGAGCTCTCATCCCGTCCATAAAACGGCCAGCACCGTGGCGTG
ATGATACGCATCCGCTGCAAAAGTGCAGAGCCACCAGAGGAGAAAGCTTGGGTCACTCAG
CTTTGCACTTGTGACTTGTTCAGCCATGGAGTTCAAGCACCTTTGCCTGGTCAGGTTCAA
GGAGGGCGTGGTGGTGGACGACATCATTCAGCAGCTCACCAAGCTCGCCGCTGAGCTCGA
CACCGTCAAATTCTTTGGGTGGTATGCATCTGCATTTCATTTGTTCCGAAAAAGGGATTC
CATCTTTTTTCACTGCAGAAGTACACCTCAAACTGCAGGCTGCATTTTTCTTTTTGAAGA
ACACTGAAGTCTTGCACCGGCGACGAAAACTGTGTCCAAGTTTATAAATAATTCAGCAAC
AACAGATCAACATTATTTGATATAAGAGTTTATTTGATGTAAGGGATGGGAGTACATCAT
TGATTGTTGCTTGTGTTGCGTTGGCGTTGCAGGGGAAAGGACGTGCTGAACCAGGAGACG
CTGACGCAGGGCTTCACCCACGTCTTCTCCATGAGCTTCGCGAGCGCCGAGGACCTGGCG
GCGTGCATGGGCCACGAGAAGCACTCTGCCTTCGCCGCCACCTTCATGGCCGTGCTCGAC
AAGGTCGTCGTCCTCGACTTCCCCTTCGTCGTTGCCAAGCCGGCGCCATCCGCTTGAACC
CAGTACCCCACCCTGGTATCTGTCTGTTACCAAGCAAGTAAGCATCTACGTACCATCACC
AACCACTGTCTGAAAGGTGCCTACCATTTCATGTAATAGCCACCATCCATCTATCTATCT
GAAGGCTGCAGCTGTGAATGATGTACCTAAGGCCTCCTATTTTTTGCTTGCTTGTCCTGC
TACTGCAGCGTTAACCGGCCGTCTAGCCTGTAAAGCCTCCCGTGTAACTCTATTCCGTGC
ATTCCGTTCAAAAGTTGCTTGGTTATATCATCCTTGAATAAACATCGCTGGTTTTGCTTT
TACTTTGCGGTCTTGATGATGAATTGATGGATATCTGTAATGGCTCACTCCTGCTTACCA
CTATTGCATAAACACTAAACTCTGGCAATGTGAGCTGAAGGCATTGGTGAACAGTAACAT
GTCAGAATTCTCATGTGAAGGCATTTATTTACAGTGGCCGTTCAATTGCTGCCCTTGGGG
TGGTTGAGCGGGGCTATCTTTCTTGGCTACTCCTTCATTATTTCCCAAGAATGAGGGCCG
GCCCGATGCACACCACCATCTCATCTTGTTAATACTTAATAGTCAAAACGTCAAAAGTTA
CTGCAGACTTTGTCGAATGGTAATACGGACGAGTCGAAAGAAATTCCAGCGACATGAGAA
TGCCAATATTAACACGAATCGCACATGCAACTCAATATTCAAACAACTATTCAGAGTTAT
TGGGTTTCGTCGAACAGCCTGTAGGAAATCCCGTTGTCGCACCCGATTCATCGCCCTTTG
TTTTTCAAAATAAAGGGTTTCATATTTAGACTTTTCTGATAGAGGTGGTATTAATCAGAT
CTGCCTTTTCTTGTTCCATCTCAGAGCATCCATTCGTCCGAGGCCGAAAATGATCAAGGG
GCTCGATGAAATGCCAGTTTTTCCTTGGGGAAAAGATTGACGATAAATGGGGTTTGCTTA
CAAAACAAGAAAACATGTGTAGCAGATAACTGAAACAATTAGAGCTGCACTCCACAGGTT
TGTATGTGCTAGGTGAAATTGGTGACCTGTAGAGACTAGACTAGGAGAGAGATATTGCTG
GGACTGAAAGATTGAAGGTGTCTCACTGATGCATCACCACGAGAATTCACTAGCATCAAC
ATCACCGCATGGCACACGTGGTTAGCAATCTCCATCAACGTTAGGTGCCATCTTGTTTCC
ATCTACCTGGATTCAGTGTCAATTCTTCGTCAAAGTATATATCTTGGTGAGTGAGCGACC
TAACTGGTCTGATGAGATGAACTGGTGAAGCATCATCTAGATTGGTGGGAACACGCATAA
TGCTAAGCAGCTCTGATCCAAGATTCAAGATCGCAAAGATCAAACATTCATACTCCACAG
TGTTGACATCTCACTCTCCTCAGAAAGCAAGCATGCAGATCCCGGTGGGGGCCTGCACTG
CACGCGGATGCCGATGTCACTCGGATCGGGTACAATCATGGTTCAGACTTGAGAGGCTCA
TGCGGCCATGCTAGATCTAACAGTGTGCAGTGCTCAATGCAGCAGCAGCAGTAGCATGGT
TGGCCTGGCTTTAACCTCCTCTGCTGAAATGATTAAGTCGAGCGTAGTGGCAAGAAAAAA
GGAAAAAAACAAATATGGCTAGCAAGCTTTAGACTGAGTGATTCCTGTGGGCGGTGGTGG
CCCTCACCGTGAGCAAATCTGGCCAGAGCCTCTCCCCTCCCGGCTTTAAAACGGCGTGAT
CATAGCAGCCTCTGCAACTGCAAGCAAAGCCACCGGCCGGAGAGGGAAGAGAGAAAAGAG
AAAGCTAGCTGCCTTTGGGCCATGGGGGAGTTCAAGCACCTTTGCATGGCCAAGTTCAAG
GAAGGCGTCGTGGTGGACGACATCATCCAGGAGCTCACCAAGCTCGCCGCGGAGCTCGAC
ACCGTCAAATACTTCGGGTGGTACGCAACATCACCAGATCCATACTTTGCAGTGCACCTT
AGTGAATGTATCTAAAATCTAATGCTGCATCTCTTCTCAAGAACTTTGTGCTATAAACCA
GTGACCAAAAGTTCAAGATTACGTATTCATGATTCACCGATATTTCTTCGACCTGGTTAA
TTTGAGCAGTTGACACACATCGACATTGCAGGGGCAAGGACGTGCTGAACCAGGAGGCGC
TCACGCAGGGCTTCACCCACGTCTTCGTGATGACGTTCGCCAGCGCCGAGGACCTGGCGG
CGTGCATGAGCCATGAGAAACACTCTGCGTTTGCCGCCACCTTCATGGCCGCACTCGACA
AGGTGGTCGTCATGGACTTCCCCTTAGTCTTTGTCAAGCCGGCGCCGCCGCTTGCTTGAT
CCACCTCCAGTATCACTACCAATAACTATTTTTGAAACGGGGGCAAAAGCTTTGCCTCTA
CCAACAACTATCACCAAGCATGGATGTGCCAGCCAACTATCTATGTGCTGCAGCTCTGGT
GTACGTGAGCGGCCGAGCCTCCTTTCTCTGCTTGTCCGGTTGCTTCAGTGTTTAGCTGGT
GCAGCTGCCTGTAGGACTGTAATCTGTAATGCCGCGTGTTCCCTTGAAAAGTTGTTTGGC
TATCTACTCTACCCTTGAATGAACTTCTGCGATTTTCATTTGTTTTTCTTCACATTTCGG
TCTTCATGACGCTTGATGGATCTCTACTACAGTATACTGGTAGCACAGTGGTGAACACTC
GTCAGTGAGATGCGCGTGAATACATTCATGTGAAGCCATTTATTTACATCGGCAGTTAAC
TTGATGTCCTTTAGAAGCGGTGCTATCTTTCTCGCTTTTCCTTTTGGGAGATACTGGAGA
GCTATATTTCTACTTAGCCTTCGGTGGAGGCAACTGCAGATTCGCCTACTACGAAGCATA
GTTTTCAATAGCCTCCGTTATAATTTTGCTATAACCTTTTTAGCAGGGTGTCGGGTGTCA
TCTCCCCTAATAATAAAGCGCGCAGCGCTTCTGCCGTATGTTGCCGGCATTTTGCATAAA
AGTCCCTTCGCTTCTGAATATTCAACCCGCAGTTTCTATATAAGTGGATCTGGATAAAAA
GACGACGACGAGGCGGCGGCGCCGATCCACCGCCTGCCGTCCGTGGCGCTGCACAACGTG
CTGCTGCGGCT