| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_136926
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_5963 |
2 |
1131 bp |
AK249855.1 |
Not available |
Available |
None |
CDS Structure of MLOC_5963
Contig Sequence (7278 bp)
>contig_136926 7278 assembly3_WGSMorex_rbca.fasta
TGGCGCTGAGTGTTGGCCAACTAAAAGGCGACATGTGCAACGGTTAGGTGAGGCGGAGAT
GCGCTTGTTGAGATGGATGTGTGGTCACACAAGGAAGGACCGAGTCCGGAATGATGATAT
ACGAGATGGAGTTGGCGTACACCGATTGAAGAGAAGCTTGTCCAACATCGTCTGAGATGG
TTTAGGCATATTCAGCGCAGGCCTCCAGAAGCTCTCGTGCATAGCGGACGGCTAAAGTGT
GCTGATGATGTCAAAAGAGGTCGGGGTAGACCGAACCCGACCATGAACACTAACTCTTGC
ACAACTAAGTAAATGACTACATAGAGAAGAACATCATACCAGATGTACAAGAAGATTATA
AGTACTTTAGGTAATGTTAGAATAGAGTGGCGCAAAACAAATGAGTCAAGTTGAATATAC
GACACTTGGTGTGGTAAAGTAGAGTGGCGCAAAGCAAACGCGTCGGGTTCAAAGTACTAC
ACTTGTATCTGGTATACCTGCCTATTATGAACATACTCCAAGAAAGAAGGAACATCTTTA
TAGCGCACTTGAGTATCGCCACCTGGTATAGATGGCTTTTGGAAACTGATTATGTCCCCA
TCTTCAAGCTAACACAAGAAAGAACAAGTGGAGGAATCAATGTATATCTTTTATAACTAC
AGACCTGAAAGAAGTTTGCATCTGAAAGTGGGTATTTTTTTTCCCAGACCTGACTAGATC
GGAAACTAAGTTTCTTGTCAATATGTTCACACATCACATTAGGCTCAAACTTAATTTCCT
GCAGCATAACAATGACAAAAGGCTCAGAATATTCATATAGGGAAGATAATTACTATAGAT
ATATGCATGTATGCCACAAGACCATTAACTTCCATACAAGGTACAATTGAACAATTAACC
ACAACGACATGAGTACAAGAATGCATACATACAAGTTACAAAGCTCTAGGTGAGCAAGAG
AAATAAAAACATAGTTGTACATAACTAATATTGCACTCACCTCATAAAGTTCGATTTCTT
CATTTGGGGAAAATCCAGCCATTTCATTAAGTTTTGTCAGGATATCAGATGGCTTTCCCA
AAGCCTTAACAAAAAGCCTACCAACAAAACTGTACAACAAGATGATGTCAGTGTCTGAGT
CTTTTGTATCAAAAAAAAGTTGATCCTTGAGAGGAGATATACCGAAGCTCTTCCTTTTCA
GGATTGTAAAGCTTGAAGAAAAGTAAAATATCTTCCTTGCTCTTCTCGGGAGGACGAATT
GGGCGCAAATCCTACACAGGTAACAATAAGACATGGTCAGGCTTCTCTAGTTTAATGATA
AAATAGGCAAAATACACAAAAGAAACAATAAACTGAAACTGATTTATACTATACCAATCC
TAGCTCTACTTCAAGAAATAGCTTCAGCTCAGCATTGTGTGCCTTGTTTGACACCTCCCT
AAGTTGCCCCACCTATGCAGCACATGACAAGTAATGAGATACTATATTGTAATTGCAACA
CAAATAAAATAGAACGGAAAGTAAAAAAGGCGAAGGCATTATCCACCATCTTCAACCTAA
ACAGACCTGAAGGCTATACAGACTGCTCTAGCATAGGTATGAATTGTGATCGAAAGAACA
TACAAAGAGCAACAAACATCAGAGCAATAAATCATACCTCAAAAAACATAGTGATTTACT
GCACTGACACCTCATTTTAGCAATTCAACCGAATTGGTGGATTATGAGATCAAATAAACC
AATGCAACACAATATACGTACTTGAGAGATGACCACAAACAGCCTTTACAGTAAAAAGTG
TACAACTTTCCATTTCAGTTACCATCCAATTGCATCTTATGTGTGCTCAAAACTAAAAGA
ACTATCAGATTAACCAATTTTGCATTGACATGACGGCAGGAGACCAGAAATAATGAAAAA
GGAAAGATCAAGCAAATAATACCAAACAAATAGTTCTCCACTCATCAAAATACTTGAAAT
GTTACAAGTTCAATCTTTCAAAACAGTTTGACTCACTGATTGTGCTTCTTCATGAGGGGA
CAGTGGACGATTGGGCCGGTATGTATGATTTTGCCTCTTAGCCCACAACCAGAAGCGCTG
AGACTGTACCGGAATCCCGTATTCCTTTGCAACTTCCTCCTATCAAACAGCACATTTGGC
AAACACACATAAGATCCAAATGAACCAAAAACGTAATCGATTAAATTAATGTAGATTATG
TTAGGGAAATAGCAACTTGTATTTCCATTGGGCCATAAGGCAGTATATATATAGATGTAC
ATGAAATATGCAGAAAGCACTAATACAACAGGGGCAATACGGCGCTATATTATAACTCTA
CCATCTCCCCACCCCAAAAAAAAAACGGTGGATCAACAGCACTAAGTTTGGATAAAAAAG
GTGTGTTGTGCTCTAGTCTGTGCCTTCGTCAAGAAATGAGCCAACTATAACTCGGAAGGC
ACGTGCTGAAGAGCATTCACCTGATCATGCGCACAAAGGAAGCATCAACACCAGTATGCT
TGGTGCGCTCATGCTTCACAGGGTCACGCACAATACTGATAGCACATGTACTGTCGAACA
AGAGAGTAGGTGTAGTGACAGAAACACCAAAATCCTCAAGCAACCACCGTAGCCAAGTCA
CCTCTGCTAGTCTGCTGTCAGAAGGGTCATAGCACGCAACTCAGCCTCTGCACTTGAACA
GGCTCCAGTATGTTCAGGCAGTGAGAGAACCTCCAAGAGAAACACAGTGAGTAAAAAGAG
ACGGCAAGAGAGTCCGACAAAGATATCCTAGAACATGAAGGAGGTGACTGTAGTGGACTG
AAGTGGGAGTAGAGGCGAACTGACGCATAATGTGAATGGGGTAGGAAATATAGGGACGAG
TCACAGCTAGATAGACAAGACTCCCAACAAGATGATGGTAGCGCGTCGGTTCGGATATAG
GCTCACCGTCAGAAGTGCGGAGGTGGACGTTGATCTCCATCGGAGTCTCAACTATGTGCA
CATCAATAAGAGCAGCACGAGCAAGAAGATCATGGATATACTTCTCTTCGGAGATAAAAG
AGCCATCGGAGATAGAAGAAACCTCAATCCCAAGAAAGCAGCGAAGAGGATCAAGATCAG
ACATAAGAAATTGCTTACTAAGACGAGCCTTCACAAAGGCAATGTACTCAAGAGTCATCT
CTAGTGATGATCATGTAGTCAACAATAGAAGAAGTAGCGTTCGATTACAAGATGGAAGGT
GGACAACAAGCGCGGAATCATGAGTACTCGCCGAAAGATTGTTTGCAATGGCTTGAGCTT
ATGTTAAAAATAGTTATGAAAATCTTAGCGATGAAACCTTGTGGTAGACCATATGACTGT
TGTAAGACATTTTCTTTCAATGTAATGCATATACATGCAATGGTTTGCATTTTCTCAAAA
ACAAAAACTGTGGTAGAAAATGGAGCTATGCTTTAGAAATACTAGATGATATTTCAATCT
GATTCGCTGTATGAAATATTAATATTTGACGTAATAATATAAAAACTAAAACTGAAAATA
CATATAATTTATTATGTTTGATTACTATATAGTTGTAAAATATTTATTAAATATGAGTAG
CGTAATAAAATGAAAATTCTTATGTGTGTTTGCATGTTGAGATGAGTCTTTTTTTTCATG
CATGTTTAACGTTGAAGTGGCATGCTTGCATGTTGAGAGACATACGATAGTGGCGGTGAG
TCTTTTCTCATGCATGTTGTGGGGTGATGTGGCATGCTTGCATGTTGAGAGAAATAGTTA
GTGGGGGCTAGCTATCTAGATATAAAAGATTACCTTAAATGAATTGAAGGGTAATTGTTT
CTGTATACGAAAATTACGGACTTTTTCATGGTCCACCAGATCAAAATATATATTCTTCCC
AATCTGCTCCTTCAAATCTTCATCTCGAGCAACCTAAGGATAATTTATTCCAAACAGAGA
TGTGTTAAAAGGAGTGCACCAGTAGAGCTAACTGGTATGACTGGCACTAGAAATTAACAA
GACCTTTATGATGGTGTAGAGGTGAGCTTCAGCTTTTTCCTTTTTCTTGTGTTCTTTCTC
TTCTTGTTCTTTCTTCAACCTTATCTGCAAAAGAATAATTGAACTGACTCACTGTCTACA
AAAGGAGTACACCATACTAACTAGAAAGAGAGGAGAATATAATGACTCACCCTCAAATGC
TCAGCAATGTCCTTCTCATCAACATTACACATTATTTTCTCCTTGTCGCTCTCACGAATA
TATACAAGCATGTAGGCATTTGAATACTTTGTGAACTTAAATGGGGTGTTATTGAAACCA
GGGTTAACTTGAGGTAACTGTTCCCTCCAAAAGAAGACAAAAGAGAGACGAAGGTGTCAT
ACACATACACTGTTCCCTAGAACCAACAGGTCATATACTGGAGATGAACTGTTGATAAAA
AACCTACCTCTTCCTCGCCCCCGTACTGCTCTTCAAGCGCCTTTTTAGTATCTTCTTTTG
TTACTCGCTCGTCATCAAATTTATACCTAAAAAAACAGAAATAAAAAATTAACACGCAAC
ATTTGCTGAATTGCTTTCAGGTGTACAGTAATCAGAGGAAACATTATGGTACGCAAAGGA
ACACAAAGTGGTTTTGTATCACAGCTCATTGAACACGTTACGGTGCAAGCAAGCTATTTA
GCAGACTGTAATCAAGTAAATCTGTCAGAAGAAGGATGCACTAAATACAAGATGCCGACG
CAGCCAAAATACGAAATGTGAGCAGAAGCTAATTTGTATACTCAGCCAAAATAGGAAGTG
TGCACAGAAGCTAATTCAAACACTGTATACCCATCTCAAACCCATGGAGAAGAAAGAAAT
GACGAGTAGGATCAGGGAGCTGCCAAGCAAGTCCTATCCATCAGTGATAAGGGTGATTAC
ACCGTACTGATAAACTGAGTGACATGTACTTAAGTTGTTCCTAGAGCAAATGAAATGGAC
TGAATCTCTCCTGTGTCTGTCATTTCTTTTTCTTCCTCGAGTTGGTGAAATTGGTAAAGA
GGGGGAGAGCAGTAGCACATTAACTCATTTGGGTCCTGTGACACAAGCCTCGACCTACAC
TGGTGATGTGCAGGTTGGTGCGCCGACTCAAATTGGTAGAGCGCCTGCCAGTGTGCCGAG
GTGGACAGCAGAGCAAGAGGAGCAGCTAGATCAACCACTGACAGAACAGCAGGATAGTAC
TGATGTAATTTTCATCTCCTCTGATTGGGATCAGGCTGAAGGTCAGGAGCTACAGAAGGG
TCAACTGATGGGCAAATTGCTTTGAGGAGAACTAATCGAGCAACAGCAGAGATACCACAG
AAAAGGTATGGGTTTGATGTCAATGATGTTGGAAACTATATTTCTATGAAGCATTATCTC
CTGCCTATAAAGCATTTGTTGCTTCTGTTCAGTCTGTCAATTTCTATTGAGTAGAATGCT
GAACCTTAAGTAATGTTTTCTAGAGTGTTGTAGGCTTCTAGCTATAAGTAGAAGTTAAGA
TGTGAAGGCTTCCCAAAGCCTGATAGAAAGAGAGGTCTTCACCTCTAGTTTCTAACTAGG
CTATGTACCCCCACTACCTATAACAGAACTTGGTGTTCTTATCTAAAATCTTGGACTAGA
TCTTGGTGCTCTAGGAGTTTTGGATTGAACTCCTGCTGCCACATTGGCCTATTTCCGCCT
CGAGAGCAATATCTAGTGCAGCTTGTTGAAGTAGTTCCTTCCACACTTGTCATGTACACT
TTGTAGCTGCAAGGTGGAGTTGCTCCTCCACAACCTTGTGCTGCTTCACACTATTTGGTG
ATGCATAACAGCAGGAACAAAAATAAACAGTACCCAAAAGAGAAAAATTCACTGTAGGTC
CTTATACTTGTCTTGATGGTCACTTTAGTCCACGTAGTTGTAAATACCCGAAACACGGTC
CTAGGGATTCACATACGGTCCAAAATACAATTTGCTCTACGTATTGACTTACGTGGCGCT
GGTCAAGTGGTAGTACGTGGCTTTGACCGGACACGTCATGGAAATAGCCTGAATACATAC
AAACTGGAGGGGGTTTCTAAACAGTCACCATAGATTGGAATAATCGCTGCCGCGTAGTCT
CCTGCCAGGAGCTGGCGCCGCCAGGGGACGCGCCATGAAGGCTAGGCTCCGATCAATCGA
CCTGCCGCCACGGTCCAGGCCAGCGCTCGAGACGATCCAGTCGTTCGCGACGCGCGACGG
GGCCAGGAACGAGGAGGAAGATGATGAGGACGACGAGGAGGAGCAGCAAGAGACGAGCTT
CGGGGCGTTCGGCCTCGGCAGCACGTACGCATAGGAGCACCCGTTGTTCCTGGCCAGGGG
CCTCGGGATCGACCGGCTGGGCTCGGCCCTGCTGAGCGCCGACTGCAGGGCCGGCGGCAT
CGACGACGACGCTGGGGGGCGGCTACCTATACCTGGTGGCCTCCGGCGGCGGGGGAGGGG
ACCGTTCCGGCATCAAGGCCCACTACAAGAGGCTCATTGATGAGGATCCCTGCAACAGCC
TCTTCCTCAGGAAGTACGCACCTCTACCAGGTAGGCACCCTCGCTGCTCCACTCTCGTCA
TTGCCGCGACCATTGTAGCTCAGATTTGGAGATACATGTGCAGCCATGCTAATAATGACG
CCAACGAAATGTCGCAGGTGAAGGGGGGTCGGCGGAGGGCAGGGGAGTACTACTCCCGCG
CGATCCTGGCGGGCCCCAACGACGGCGAGCTGCTATCGGAGTACGCCAAGCTGGTGTGGG
AGGTGCACGGGGACGAGGAGCGCACCTCTAGCTATTTCGACCGGGCGGCCAAAGCCGACC
CACACAACAACCAGGTCCTCGCCGCGCAGGCCACCTTCCTATGGGACACCGACAACAGCG
TCGGGCCCCAAGACGACGACGATGCCACGAGCTACACCGGGTTCCCGGCAGCTCACCCAT
CCATGACCTCCGCGACAAGCTGAGCTGAGCCTCGCCACCGTGTCTCTGAAGTTGAAGCCG
ATCGACGCTGATTGGAGCTCGTGTAGCTGCTTCAGTACCAGACTACCAGTAGATCTCTCC
CAATAATTCTTAGTCGTCCAGCTTGCTTGTACTGCTTCCTATAGTGAACAAGTAGATTCC
GATCCTTCCGAGAGATGCATTTCTTCAGTCAGCTCAGTACGATGCATTCATTCATTCAAA
GACTAAACTGTAGATTCAAAAGAGTGATCTGTTAGGAAGTATTAGTATTAGTCTAGGAGT
CCTTATTAGTCTATTAGT
