Contig Data
morexGenes
Links



Map Locations of contig_136905 (4900 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_136905

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_5950 2 1451 bp MLOC_5950.1 Available Available LOC_Os03g21040.2, FRAME:-3, EVALUE:0.0, 13103.m02521 protein stress responsive protein, putative, expressed





CDS Structure of MLOC_5950






Contig Sequence (4900 bp)

>contig_136905 4900 assembly3_WGSMorex_rbca.fasta
CCTCCCGATGCCCCTCCTCCCGAGGGGCGGATCTGCCAAGGGCGGCTTGCCGGTGTCGCA
CGGTCCAACCTCCTCATGTGGGTGACGTGAGCCGTGCTGCGCGGCATCAGGGCTGGTGCC
AGCGGGCACAGACGAAGAGGCTTTTCTCCTTTGATGTTAAGGGAACCGAGGCCAGCTGCG
GGTTTCCGGAGCAACCATCCAAAGAGTTCCTGATGGATGCAAGAGGACCAAGGCTGGGGG
CTTGACATAACGGAAGTCACCCCGTGAGCCCACCTCTGTGTCATGAAGAGAGGCTTTTGC
ATGCGAAGATCACCTTTTTAAAGACGGGTCGCGGTCTCGTCCCTTTCAAAATGGCCGTTA
CGGCTTTACTTTCCTCCGGATGTGTTTTCGAGGGAAGAGGACCAAGGCCTCCGGATGTGT
TTTCGAGGGAAGAGGACCAAGGCCATTATAAAAGAGAGGCCCAGCCCAGCCTCCGTACCA
GGGGAATCCAGAGTCAAGTGTGTTGTATTAAGGCAAGAATCCATCTTTATATCGGTCTTC
CACCTCGAGTAATTTATCCAAACAGGAATGGAGTTTTACACCGTGAGGTGGACCGAACCT
GAGTACGCTATTGTGTGCTCTAGATTGCCGTCCTAGCTCCCGCCCACGCCGCCCACGTAG
AGTCACCGTAAGGTTGAAAGATTGAACGTGATTGAAGGACGAACGTATCCAGGTTGAAAG
ATTGAACGTGATTGAAGAACGAACGTATCCCATTCTTCGAACCTTTTCTTGAATATATGT
GGAACCCCGATTTCAACACGTACGCGTGGCGGGAGAGCTAGGTCCGGCGACTCGCAACTT
GCTGTAGGCTAGCGCAGGACGATATCAGTCATTCCGGTCTTCTTCTTTTTTTGGATACAG
CCCAAGGGTAAAAAATGACCGGGATCGGGATAACGTCCTATGGGTAAAAAATGATTTTTG
GATACAGCCCAAGGGTAAAAAACGACCGGGATCGGGATAACGTCCTAAGGGTAAAAAATA
CCGACATCTACAAAGGTCAGGGTATCAATTTTCGGGATTTAAACGTCAGGGTCCATTTGC
CTCATCCTCTATAATCTTAAGGTTTAAAACACACTTTACTCGATTCAATGACAAACCATT
GGTACTCAAGTGCAGGACCATATAGATATCGAAAACGCACCTTGAGACATGGGTGCGCCC
ATGGATACAGTAGGCAATGTAGTTATGATAAAAGTTTCACATTTTCTGATTCTTTTTACT
ACTTTTAATTGTTTTTTACTTAATCGGCTGAAGCCTGCACATAGGTTCCAAAAATCCGCA
CCGATGTAGATAGACAGTAAATACCATTCGCATAGAGGCAAGGATGACGCCACGGTACAG
AGGTTCTCATCACGGATCCATGGTCTGAAAAACAAGCACAGGTGCCAAATGCTTACACTC
GCATTAGCAGGACACAACGACAGGACAGAAACTAAACACACAAACTCACGGACGCATCAC
CACCACCGACCGCACACGACTTTTATTCTACCGACACGGCAACAGATCACAGGCTGATCT
CTACCAACTCCGTGTCCCGGTGGCGATCAATGCAGCTTCAGCAGCATGACACGTTTCTGC
AAGCACAAGCAACAATAAAACACATTAATATTTTCGCCAAAAGGGAACGCAAATAATTCA
AAAGATGGCAGATCAGCTAACTCCATCCGTTTCTACCCACTACTCCACCAGTTTCTTCAA
GCGAAGATGGAGATTCAAGTTCTCCACTAGCAAGCAAATGGGAGCGAGTTAGGGGGCACT
TACACCAGGGGAGGATCTTCCAGCGCTGGTTGTCTCCCTCGCACCACTTCCACAGCACGA
GGGAGGTGCCGTCGCGCACGCCGCCGTGCTCCTTGTCGCCGTGGAGAGCGTCGAAGTTGA
GGTAGATGTTGTTCACCATGCGGATGCACCTGAAGCCGGCGCCCACGTCGCGGCTCTCAG
TCCACAACACCGACTCGTCCTGGTAGTTGGGGTTGTATGGCACCAGCTTCACCTGTTGGA
TCCAACAGCGAACCAAACATTTCTACTTAATCACTTCAGATCCGGCACCAACAATTTCTA
TGCAAGCGAAAGTGATGAATGAATCGAAAAAGATTCTATGCAACTGAAAGTGATGAATGA
ATCGAAAAAGATTTAAGTGGCTTTGATTGATGGTTGCTTACAGGGTGGCCCTCGCCTTGG
GAGTGCTTGAGGGCCTCGCCTGTCACCTTGTTGATGAGGGCGAAGGCCGGGTAGCCTTCC
TCGTCCTTGATGCGGTTGCTGTGCCTCATGTCCTTGAACCAGTGCTGGTACTCGTCACGG
GGGTTGCTAGGTGCGAGGACGACGGTGCCGTTGCGGACGGTGGCGCTGAAGCCCTCGTCG
GCCTTGCAGAAGATGCGCACGGTGGGCTCTGAGGAGCCGCCGCGTGGTGCGTTGGCGCTG
CCTCCGGCGTAGGCCTCTTCGCCCCAGGGGAGGATCTTCCAGCTCTGGTTGTCGCCCTTG
GCCCACTCCCAGAGGACGACGGTGGTGCCGTCGTGCACGCCGCCGTGGTCCTTGTCGCCG
TTGAGGGCGTCGAAGTTGAGGCGGATGTTGTTCACCATGCGAATGCAGCGGAAGCCCTTG
CCGACGTCGCCGCTCTCCGTCCACATCACGGACTCGTCGAGGAACTCCGGGTTGAATGGC
ACCAGCTTCACCTGCACACCCAAACAAATCATTCCACTTCCATTACTAATAAGCACTAGT
AGAACGAATCTAGATTCGGAAACCGGACGGACGAATAGTTGCAACCATAACAGGGGAATG
TTTTCTCAAGAAAGAAAGAGGGAAAAAAAGAGAGGGGAAAGAGAAGATGACGAACCGGGT
GGGACTGGCCGAGGGAGTGCTTGACGGCGAGGCCAGTGGCCTTGTTGACGATGGCGAAGG
CGGGGTTACCCTCCTCGTCCTTGATCTGGGTGCTGAAGCGCATGTCCTTGAACCAGTGCT
GGTGCTCGTCGCGGGGGTTGGAGGGGGCGAGGACGACGTTGCCGTCGCGGACGGAGAGGC
AGTAGCCCTCGTCGGCCTTGCAGAAGATCTTGAAGGTGGGCTGGTTGCCGCCGGCGGCGG
GCGGAGCGTGGGCGGGGGGGTTCTGGCCATGGTGGCCGTGGTGACCGAAGCCGAACATCC
TGTGATCTCTCGGGGGTTTGCGGGACAGAAGGAGAAAGGTTTTGGACGGGGCGATGAGAA
ACTGCGTCCCTTGGGTCCCGTTTATAGTAGGGTGTGCCCAATCACTGCCTAGTAAAAGGG
ATCCAAGGCGGGTTGAATTATTGTTGTACGGGTGTGAAGGGCGTGAATGTCACGACTCCA
TGACACGTGGGGTCCGCCAGCCGAAAGTTCTGGAGGGTACGCGTCAGCCGTTCACTTAAG
GTGTCAGTCCAACGCAATTGCTGCTTAGTTCGTGCACGGTGAAGAAATAAGAGGGTGCTT
GACTAAAACTAGTCTGACTAAAGAGAGGCTAAAAGTAGTTTTAAAACTAAAATCTTTTAG
TCAGGGGTACCCCTACTAAAATATGGATTAGTCCTCTCTCTCCTCATTTAACTCCGCTCT
TTTAACAATGCGAGTTCTGGATTAAAGGATTTGAAGGATAATAAATGCTCATTAACTTGA
TTTTAGTCTCTTTAGGGCATCTCCAATGGTTGTAAGATAGTTGTTGGTAAATTTTGACAC
ATAAATTTTTATGATGTGTCATGCAATAAATGAGGAGTATGTAAATTAACCAACACCCTT
GCACAAGCTCCAATGTAGAATGAGAGAGCACCTTATTTATTACCTCACATTTTATTGGAC
AAACTAGATACAACCCATTGAAGTAGTTGTATGTTATGGTGTTGGCTGATGATATGGCAT
ATTTTAATAACAAGCTAACTAACAAAATGTTGGAGATGCCCTTAGTATTTGGATCCAAGC
ATGGATGAGGCTACCAAGTTTTAGTCCCACTACTTTTAGTCATNNNNNNNNAACGTATCC
AAGCACCCTCTAAGGCTCGTTGTAATGTGTAGTATCATATACTAGTATCATACATATGAT
ATTAGTGTATGATACCAAAACCGTAATGCATAGCATCATATGATAGTATCGTAGGATGGT
TCATTTATTATCATGCAAGACACATAGTAGCACAACATTTAATATGATGCGGTATCATTG
ATATGATACTCAATCCTCTCTTTCTTCATTTAATTATATGCCACATCATCAAAATTGCGT
AGTTGACATGCATGATACTACCTATGATACTTCCATTACGGGCAACCTAAAGAGCAACTC
CAACCAAGCCAACTAGGTCACTCATTCGTTCGGCGTGTTTGTTGGATCGCTACATACATA
AAAGTTCGTCAAACGCGTCTATCTAAACAAACACTTGTCCATATTTTATCCGTCCACTGT
CCATTTCAGGCTCAAATTTGAACCGTATTGTATCGCCACAGACATAGAACGAACGCCCAT
GTTGTCCCCTCTTCTCCTCCCCCTGGCCCATTAGTGGGTGGCACGTACGTCATTCTTCTC
ATCTTCCTTCGCCTCCAAATCACCCGTCCACCCCGTCTCCCACCCCCGCCACCCACTTCT
GACGCTGTCGCCAACCATCCGCCTCGTAGACTCCCCCCACCCGCAGCCTCGTCTCCCGTC
GCCGCCTAGCTCCGCCCCTTTCTCTCGGTGGGACCTCAGGCTCCTCTCGAGCTGGAGTCT
TCCACAACGCCCGTAAAGTGTTCAACACTTTGCCCAATGTACAAATGGACTCCAATGATG
AGTATTTTTTTACAACCTTTTTGGGGATTCGGGTGATTCTTCATTTCATGAGGAGGAGAT
GGTGGCGGTTGCACTGGTGTTGAGGCATAATTTATGCCTA