| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_136889
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_5937 |
1 |
1822 bp |
MLOC_5937.1 |
Available |
Available |
LOC_Os05g28520.2, FRAME:+1, EVALUE:0.0, 13105.m10318 protein MRH1, putative, expressed |
| MLOC_5938 |
6 |
5949 bp |
MLOC_5938.1 |
Available |
Available |
LOC_Os05g28510.4, FRAME:-3, EVALUE:0.0, 13105.m02937 protein importin subunit beta, putative, expressed |
CDS Structure of MLOC_5937
CDS Structure of MLOC_5938
Contig Sequence (9019 bp)
>contig_136889 9019 assembly3_WGSMorex_rbca.fasta
AGTGATTTTTCAAGCGTGCCCTCTAAACCGTGACAGAGAGAGTATTGAGCGAGAGATCTT
CAAAAGTATTGAACTTGATAAAATTAAGTAAGATTTTCAGAATGAGGGTAGGGCATTTAT
ATTACCTGGGTCTTCTAGACGTCATTGAAAGCTTCATTATCGGTATGTTTTAAGTTGTTT
TTTATTCAAACATGTTTACATTTTTATTGTATTTGGTTTTTATTTGTAATGTGTATTGAC
TCTTTCGATTTGCACTAAAAGAATTATTTCCTTAAGACTTCGCCACACCTTAATTTTTTT
TCGTCCTCCACCTCTGCCTGGAGCTGTCCAATGCGGTAGACTGGACTCCGAGACCGAGAG
CGGGCACGCTCGTCGTAGGTCATACCGCTCTAAGAGCAAGTACAATAGAGCTAAGTCAGC
TGGCTATAAGGAATAAACTAATATATTTTTGTTTAGTTAGAGAAAAGAGAAGAGGAGAGG
GAAGGTAAACGCTGTAGCACGTGCTCCTAGGCATTTTGTAAGTATGAAAGATGGACCATA
TAATAAAGAAGTAGTACATTTTTGCAATGAACTATTGTATATATTGACTATAAATAGATT
GTAAATGACATGACAATGGCTTATAGCCACTAGCTGGCTATACTGTTGCACTTGCTCTAA
TCCATCCGAAGAGGGCCAAGCAAGCAGGATTATATCGGGGCGCGCCGTGGGCGGCGTGGC
ATTCCGTGGTCACGCCTCCAACAAAACAACAAAGCCATCAACGCGACCCCCTCCCTCCTC
TCCTTCCAGGTGGCCACCCATTAATCCTCCTGCTCCTTGCTCGGTTATCTGCCTCTTGAC
CCCGACCCTTCGCCCTCTCCTCCCTCCCTCGCGCCATCGCTCCACTATATTGTTGTGCAC
GCACGCTTAACCAGCCCAGGCCTCTCTCCCCGTTCCGTTACTCCGTCCGTGCCCGTCCAT
GGGGAGACTGTGCTGCCCGACGGCTGCGCTTCTGCTGCTGCTGCTCGTCTCCTTCGGTTT
CAGCCTTGGCTCCTGCAGCTCCGACGCTCAGCAAGGTATGTCACTGTACCTCTGCTGCTG
CCGCTGAATAACCGTTGCTGATATTTGATTCCTGTGTGTGTTCATGTCATAAGAGCAAGC
TCCTTCCTTTCTTTCAGTTGAATTTTGCCACTTGCTTGTTTTCGTTTCTTTCAAGTTGAG
ATGTATAGTGATGACAAGTACGAACTCTCTCACTGTAGGAAGGGCGAACCACCGGGAGGA
AGATGCACGGCCCGCAGATCGGTAAGATCTCTCTCACCATACTTTTCATGTTCAGTTTCA
GGAATGCTCTGAATTTCAGTGTCACTATGAGAGAATAGGGTGTAACCTTTCTTCGATTAG
GTGGAGTAGCTTGGAAACTTCTTCGTCTGCATGTTTCGTCATCGTGACATTCCACTCTTC
ATTTTTAAATTTGCAAGGAAACCGATAAAAAAAGCACATAAAATACTGCAAAAACATTCT
TCGCGGCCATCTTCTTAGATTGCGTTGCATAGAGAGGTGGGAATGGGGTGTCGGCTGTCA
GAGATGGACAGCTGAACCACCGAGCAACCCCGGTTGGTGCATGTCCCTTGTCCAATTGTT
CCTCGCCTCTTGTGCTCACTCTCATCTGCCGACTCCAATCATTGTCAGGCGGGTAAACCA
AGCGGTACACATCCGAGAAGCTCTACCACGACCGAACAGGTACAGGTCCAAGCAGTCGAC
GGCGTTCCCGCAGTGGCCACCCTGGCCATGGGCACCGATAACGACGCCGACAACAAGTTC
ACCGCCGTTGCAGGGTGCTGTCTCCCCGTCAAGCGCTCCCGCGCCGGCGCCGGCTGTCGC
CAAGCCTCTGGCGGTGCCGCCTCGGCACGCCGACGAGCCCGCGCACAGCATCACGGTGCC
ACCGGCGCCAGCGACAGTGGTGACCCACGGCGCTGCGGCGGTCGGAGAAGCGTCGAGCGA
GGCGGCGGGCCATGATCCTGCAAGGCGGCGTATGTATGTCATCGCCGGAGCAGGAGCTTC
CCTCCTTGTGGCAATGTCGGCGGCACTGTTGGTCCTGTGCTACCGGTCCAGCAAGGTGGT
CACCGTCAGGCCGTGGGCGACCGGCCTGAGCGGGCAGCTGCAGAAAGCGTTCGTGACAGG
TTCACCCCGTCCCTGAAAACTGCGTCCCATCTCTACTGCTACATGGCTCCCTTCTTTTTC
TTGGAAGTGATTGGGAGATGGCTGCAGGCGTGCCGGCGCTCAAGAGGTCGGAGCTCCAGG
CCGCCTGCGAAGACTTCAGCAACGTCATCGGCTGCCTGTCGGATTACATGATGTACAAGG
GGACGCTGTCGAGCGGCGTCGAGATCGCCGTCATATCGACGACCAAGAAGTCCGGCAAGG
AGTGGTCCAAGCAGTGCGAAACCCAGTTCAGGAAAAAGGTGGGCTGCAAAGCTAGGACGA
AACTGAACAAATCAGTTAGTATTACCCTGAAAATAAACTTACTACTAATGATGGCAATTG
TGCTGTTTCAGATAACAAGCCTGTCCAGAGTTAACCACAAGAACTTTGTGAACCTGCTGG
GCTACTGTCAGGAAGAGCAGCCATTCACGAGGATGATGGTGTTCGAGTATGCTCCCAACG
GCACTCTCTACGAGCATCTCCATGGTAAAGCTAGTGGAGTTCCATCCATAAGAGACGATG
TTTTTCATGAGCTGTGGCAGATTAACTAAGGAAACGATGGTGTTGCTTGCCGTGCACGTG
CAGTGAGGGAGGACGGTCACCTGGACTGGCCGACGCGGCTGCGGGTGGCAGTCGGGGTCG
CCTACTGCCTGGAGCACATGCACCAGCTGAGCCCGCCGGAGATCCTCAAGACGCTCGACA
CGTCCACCGTGTACCTCACAGACGACTTCGCGGCCAAGATCGCGGACGTCTTCTTCTGCT
CCGACGAGGCGGCCTCGTCGACCAGGACGGAGATGGCGAGCCTGCAGTCCCTCCTGGCGC
TGTCCGACAGGGAGAGCGTCGTGTACAGCTACGGCATGGTGCTGCTGGAGATCATGTCCG
GCAGGTTCACGGCGTCGGCGGGCGGCCTGCTGGAGGGCTGGGCGGCGAGCTTCCTCCGAG
GGGAGAGACAGCTGAGGGACGTCATGGACCCTGGCCTAAGATGGAACGCGACCCTCCAGG
CCGAGACCGTCAACAGGCTGGACAGCGTGATACGGTCCTGCACCGACCGGGAGGCGAGGC
GGCGACCCGCCATGGCAGAGGTCGCAAGGTGGTTGAGGGAGATCACCGCCATGCCGCCGG
AAGCAGCTACCCCCAAGGTGTCGCCGCTGTGGTGGGCGGAGCTGGAGATCATATCCACTG
AGGCCACCTGAAGTTCACACAGGAGCTGAGCATTCAGGTTTGCAACAACAGTTGTTGTAC
CAACAGTTGGGATCGCAGTGTGTGTATGTGGTGTAGCATAGCGCCAGAGTACTGCTTGTA
TTTGCTTCACTAAAAAAACCTTGTAGTTTGTCCGGATTTTGTAACCTGAGTGCAGCTACT
GCATACTGCAGCACGCACAACACCCTGCAGAAGAGACATCCGCAGCATAGCATGAGTGCA
AGCATGCAACACAAACCGAGTAGAATACAATAATAATGAGTTTAGCTGTTCAAGACGTAA
ACCCCACTGCCGTCGAATGTGACGCACAACGACTTGACAGACTGAAAATAATAAAACCAC
CCAAGACATCTACGACAAGGTTCCTACTGACTGACTGACGCTACATATACTTTGGTACCC
TTCTGTTCATATGAGCCAAACCCAAATTCCGTTTGGTGCATCAATAAAACCAAACATCCA
CCATAACAAGACAAGGTAAGATAGTTTCTCGTCTAAGAAACTATCGCTTGGTTTATCATC
CCCTGGGTCCATGACGCCGTCTCCCTCACTTCATCATCCAGATCGAGGCACTCCCTCAGG
AACTCAACATGGAAGAGGTGGCTCTTGAACAGATCCTTAGAGATTGGCCCAAGTGTGTCC
GCAAGATCCCCCAGGACAGCAACGGCGGCTTTTGTCACGCTCTCATCCCTGAAAGTAAAC
ACGTGCATATAATGTTAAGGAAGAGGAAACCAATCACCCGTGTAACAAAAAAGAAAGGAA
ACAGAAATGACGTGGACCTGCTCCCATCTTTGTAGACAGCTTCAGTGAATTGCAATAGAT
GGCCTGCATAAGGTATCATCAGCTGAGCTTTTGCGCCCTTTAGACCCTGTAGTATGCCAG
AGTATGCCTCAAAAATTCCCCGTCTGAGCTGGTTACCATAATCAACCATATCCTCGTCAT
TTTGATCCAAAACAACAAGAAGCTCAGCCGCCCCTTGAAGCATCGGCATAGCATACGGCA
GGTATTTCTCAAAATTTTCACCAATGGCAAGAGCAATGTCTCCAAAGCATGAGAAAATTG
GGGGCTTGACAGACCTGTTGAGTTGTGAGTTTGAGAGATCCTTGAGAAGCACAGTCATAA
TCCCATCACAGAAGGGCAAGATTTTATCTTCCAAGGCACGGCAAATATCACCCACCACCC
CTACAGAGATGGAGCATACTTGGTATTCTTCATAATTCTGCAATCCTGCCTCAAGGTACT
TCAAAAACTCAGGCATGTATTTCTCAAAATCTGGGCCAGTGGCATAAGCAAGAGCACCAA
TGGCCAGCATTGCTTCTTCATGTACAGTAGCACTGTGGCAAGCAAAGACACGGAGGAACA
GAAGCATCAACTGGTCAGCAGTCTGTGCAATTATGGACTTTGCATCCGAGCTGTTCAGTT
TCTGGATAATAACCTGCAGTACACCACACAGCAAAGCCTGCAGATCGCTTTGCTTCTCCT
TGTCGCCTGATGAAAATATTTGGTGGTCAAATGTCAGATTCAATCTTCTCATGATCTCCT
GCAATAACTGGCCTATGATGCTTGAAGTTTCAGGTATGTTGCTGACTCTTACAATCTCAT
TCAGCGCTTCATAAGCAGATGCACGAAGCCTCACATGGGTCATATCACTACGATCCGCAG
CAGTAAGGAGTGCAGCGATAACATTAGGAAGATAAGGTGTAAGCAAAGATGACACCGGCT
CTGCATCTTCATAACCTTGGGCAAGAAAATATATGGCTCCACAGACTTTCTCAGCCACAT
TTGGAACATCTTTGCTACTCTCTAGCAACACAGCCATGATACGAGGAAGGTTTGCATTTG
ATATGATTGGATTAGTACTGCATGGAGAATGCAAAAGCTCAAATACCCGTCCAAGAGTCC
AAGCAGTGGTGTCTTTTACCTGGCTGTTTGGATCATTCATTGTATTGAGCAAGAAATCTA
GTCCAGCCTGCACCAAGGGAGCAAGTTTCTCAAGGGATGGGCCATCAAGGATAGAACCAA
ATGCAAAAGTTGCTGCCTCACGACAACGCCAATCCGGCTTTGTGATGTTAGCTTCCACAA
ATGGCATCACAAGAGGGACAATTGCATCACCGACAGTTCTAGCAATGAGTCCAAGGCATG
TTCCACCACTCATGGAAATGTTCCAAGCATTATCATCTTGCTCTTGATCTTCCTCTTGCT
TCAACAGGGTTTCTAGCAGCATTGGAACAAGTGAAGGGAGGGCCTTTTCAATGAAGCGAT
AATTTACAGTCGAGTTAGCATCATCAGATCCCTCATATTCCTCTTGGAGTTCAATCTCCT
CCTCACAAATAGTACTCCAGAACTCAACAGCTTGCAGTGCAACTGGTTCCTCGTCTCCTT
TTACAGCATTAGCTGTCAGGTTGAATATGGTTTGCATATAAGGATCTAAGTGCACATAAT
ATGTGGATGCAATTGCCACAAGGCATTCAAAGGCTGCCTGTCTGATCTCCACTTCTTTAG
ATACAGCAGTATCACAAATTACCTTCATTATAAAGGTCCTCTCCATCTCATTTGCAAAGT
TGCTCTCAGCAAAGTCAAGAGCATTATATAGAGCTTTGACTGCTGCAAGACGGACTTCAG
AGCTTAGCTCTGTCTGGTTCATCCCCTGAACCACAGCAGTCAGAACAGCATTCACTTGAT
CCTGCTCCAAGTGCTCAGGAGGAATCTCCTCACAGACATACCCCAATGCTTCTAGAGTTG
CTTGCTTTAGTGGCGCAGAGGCCCCAGGCTGAGTCATGTTGCTCAGCAATTTGGCAATGA
GGTCTTGCCATTCCCGACGGGGTATCTCAATGGATGCAATCTTTGCAATGACTTGTGATG
ACGTCTGCCGGGCATCACCCACCGAAGATCCTAGTGTTATCAGCAATGACTCCTTAATCT
GCGATTTGATCGAGTGATCCAAGCTGACCCATTGCTGAATCAGCAGCTCCTTCCTTGCAG
AATCTTTTGCGTCCAGTGAATTCTTAAGGATAATACCAGCAAGTCTTCTAGACTCTGGTG
GCCTTTCATCATTCGATAACTCCACCGACAAGGATAGGAGGAAGTTGGGAAGATTCTGCT
CCTGGAACTGCTTGATGTTGGCTTCTGCTGCTGAGCGAAGGTTACCATCTGGAGACTGAG
CAGCTAGCAGAATCTGAGTGATATCCATGACTGTTGCACCTGCCCTGCCAAATATTGAAA
GACCATATTGTATCAGTTAGACAAAAAAAATATCAGAGGATCAATTGTGTCAGTTAGCAA
CATTAAGGATAAAACACCAAAGTACAAATTTTGAAAAATATTGTACCAGTCAGCTGTCCT
AGTCCTACAAGCTACTGACCAGTTTCACCTAGCTTAGTCTTCTTCCACAAGTTGTGGAAG
GTTTGAGAGCCACATAATACGGTTACATAATTATAATACAAAATGTTCTGCTAAAAGACA
GTTGCAGGATGAGAAACATGTACCACTGATGGAACAAAGCACTTATAGCGTAGTTACACA
TAGATCAGTAGATACTGTTTGTCTCTATCAGAGAGATAAATTTCTTAGTTAAACAGTTAG
AAAGGCTCTGACCATTTGTTAAGTTTATTTGACTGATGAGCCAAAGCTTAAGTAGGCTAA
ACGCCCCACAATAAGCTAGGTATTCATGAGGCAACTGCACACTACATCACCAGAACTGAT
TGACAAAAAAAAACATATGACGATGTGCTACAACCAGATAAATTATGATGACGGGAAACA
ATATTACTACACGCATGGACAAAATTAAGAAAATAAGAAAACAAAATTACAGCAGGGTAA
TATATGCCTACTCCACCAGGACCTTGAACATGCCAAATCAAATTGTACTAATCAGCAGCG
CTAGATCAATTTACACTAATCCACAGCGAGCTAAGCTATACAAATACGCTAGTCAAACCA
ACTTGGACACAATCACTGATGCGTGTTGGGCAACGGGCCTACCAATACCAGGGACCGATG
CGTATCGAAGCGGCTTACAATCCTAAATCCTGGTAGAAAGGGGGAAACGACCACTGGCAC
ATACGGCTGGTTCCGCCGCCGGCTCACCACCGGGTGCTGCTTCCCGCCGACGGCGCGCGC
TTAACCGGCAGCGAGATGGATGGACGGTGTGAAGGGGAGACCGGATTGGATGCGGCAGAG
ACTCCCGGGCTAGGCGGCTAGGGTTAGGGATTGGGGACAGGGCCCGAGAGAGATCGGGGA
TTGGGAGAGCGAAACCAATCAAGGGAGCGGGAGAGCTCACCAGAAGAACGAATCTGCCGG
GGGGATGCTTCCGCGCTCGCTCGCTCGCCTGCCCGCCTCCCAGACAAATGGAAGAAGACT
GCGGAGGAGGAGGGGGAGGGGAATAGGGGCAGCGCCGGCGGCTAGGGTTTAGAGGCGGGA
TTCTGGGTTTTGGGGGTAGGCCGTTCGGGCAGGGGGGAGGACGCGTGGTTTAGTACTAGT
GGACGCGCTCGATCCAACGGCCCGGGCTACTCCCGCCCGGGCCCGACAGGCTTGCTCGAT
GATCGGACGGTCGGCTGGGTGTTCTGTTTTGTCTCCTCAATCAGGACGAAGGAAAAGGTG
TCCTGTTTTGCTTTCCCTCGGCGGAATGGCAATGGCTTTTCTACACCTAGCTCACCAGTT
CGATCCGTAAAAAGTCATTTACAGTTTGTAAAAATGGTTTTTACGGATCGGCGCGAGCGG
ACAAAGCCAGATTCCGAAAACGGATACGTATAAAAGGATATTCACAAAAGATGCTATTAT
ATGAGGCGTTAATGCAGGGTTTGCTCGGGCGCCACCGCGTTGACTCGCAAAACCGAATAC
CCCGTAAATCAGAATTACTCATTATATGCAATTCTACTCCTGAAGGGGAAGTTGATAGCC
GGCGTTCATCGGGTTTATTTCGTCTCTCCTCCCACCATCACATGGTTATTTTTCGTCTCT
GCTCCCACCACACCCTCCATGCTGGTCTTTTTTCACCCGGTTTTCCCCTGCCTGCATAAA
ACCAACTCCTCTCTCGATCATCTAAAAAAAACTCCTCTCTCGATCTCTCCAATCTCCTGT
TGCTCAGCCATCTAGGGTTCTCCGTCTCCGTTACCTTTCGCCTTCCTCCTCCGTTGCTGC
CCCTAGCCTCCTCTGCCTCGTGACCTAATTCACCCAAACCTACCACCCCTCCGCCCCGCC
CATCTTCCTGGCGGCCACCATTTTACGGATTACGCCTCCTCCATGATGCCTCCGATTCCA
ATCCATTGCACCACCGCCAGCGGCTCCACTCCATCGGACTGCCCTAAGCACGGGGGCATC
ATCCATTTGTCGTCAGTTGAATACTTCATGGACTCCTCGTACTGAAGGCCCACAAACACC
GGGCGACAGTACAAGTCTACCATATGATTCCCGATCCTCTGATCGTTCTTCGGACTAAAA
CGACAAACTCCAGCGGTGATGCAGGCCTCCAATAAGCAGAAGCAAACACTGGGCAGAGAT
GTGTATGTATTTGTGCGGCAGGCGACAAGAGGACGCAGGGGCGCTAGCACGCGCACCACA
CAAGCTGATGAAGTGATGAAGGTAGGAGCATCACTGATTGGCATGTATACTGTGACGGCC
CGAGACCGGCGCTCCAGAA
