| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_136752
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_5828 |
2 |
1234 bp |
MLOC_5828.2 |
Available |
Available |
LOC_Os05g37470.1, FRAME:-3, EVALUE:3e-83, 13105.m03906 protein transmembrane amino acid transporter protein, putative, expressed |
CDS Structure of MLOC_5828
Contig Sequence (5403 bp)
>contig_136752 5403 assembly3_WGSMorex_rbca.fasta
AAAGCGCATATTCACCCCTCCTCTAGACGACTTCCACGTCCTTTCAGCTAGGCCTCGATC
AGAGCCTCGGCGAGGGCCACGGTTCATGCCACCACGACCCAATCTATTTGCAAGTATGAA
TGATCCCCATTCCATGTCTTTCTCATCGTGCTCCCCTGATCCGCACTCCTCGTGCCAATG
GCCCATCATTCCACACATATAACAAAAAATTGGGAGCTTTTCAAACTTGACCTGGTAACA
TTCTATTTTCCCATTTTTTGTGAAGCCCACACACCCGGTGAGTTTTTTTGTTGACATCCA
ACTTAACTCTCAGAGGAACGAACTCATCTATGAAACCATCAGGGAGAACAATCTGGCCTT
CATGTACTTCACCAATGCGTTTAGCCATATTCTTCACAACTTGTTCTCTCTTCAGAACCA
TGTGTGGGAGTTTATGTATTTGGCACCATGTCTCAATCTTATCTAGCTTTACTATTTTGG
GAGTTTTGAATCCATCATATTCTGCCATGACCAAAGCCACGCCTTTAAAATTCTAAGGTC
CGTGATGGATCACTTTATTCCAATTTGCTAAGCAATTGAACTAAACTGGAAAAAGGTTAG
GGTTGATCCTTCTTCATACCACATCCCTCGTGGGATTCCATGGCGCCTTCATGTCTGCGA
TCAGGGCTCCCTGACAAAAGGACTTAGTCGTCAGTACCGTGGCTAATGCAAGCCACTTTG
GCTTTTCCTCAGGCTCATCTGCTTCTTCTTCCTAGACTAGGTTGTCGAGTTCATCCTCTT
TAAGACGCAAACACTCCAGCAAGGCACTAGGGCCGTCCGGGGCCTTGCTTCTCGATCCAC
TGGAATCCGGAGGCGTCGCCATCAATGATCAAACACTAGGAGGTAATCCTTGGTCACACG
GCTACTCACGACGGAGTCGTCACAGGACAGCGGATCCCTAGGCGGCCCTAGGTGATAGGG
GAACCCTAGGCGGGGCTAGGGGCAGTAAAAATGACCTCTAAGACATGACACATACGCTAG
GGATGTGAACAAAAACATTATAATTTCTTCTATCAATGCAATGATACGTATGCTTTGTGT
ATCCCCCCAAAACATTACCCCTAAGAAGATCTATGAAGATGGCTTCTTATCTCAAATGAA
TCGATACATCACTTTTTCCTCCCCCCAAATCCAATAGATTTGTAGTAATGAGGCCCGACC
AATGCTAGTGAAATAAAAACTCTCAAATTCAATGGTATCCGCTTCACACTGTCTTGTTTG
ATTATGAGCCAGTTTGGGACTGCTCTGTTTCTTAAAATTCAGCTCTCCTTTAGAAAAGAC
AAGCCAAACGGGGTAGCTCCACGACATGCTGTTCCACAAAAAAACTAGAATTTGAGGTAC
AACTTCAGAGTTTTTATAAAGCCCCTAAAAGGGTGCTTCAAAAATCTCTAGAAGGTGGAG
TTGGGGGGAAATTATCCAGCACTGCCACCAGTAAGTGGATACCCCTTCATTTCTTTTCCC
TCAACCAATCAAATAGATTCTTTTCACCAATTTTTCTATTCTTGAAGCTGGAGCTAAATG
GAAGCCAAACATTCTTTTATAGTGCTATAGCTTTTGTATGAAACTGCTTCAAATTAAATT
TGATGAAGTGAAGCCGATTTTGGTGAATTGAAGCGGTTCCAAACAGGCCCTATATATCAC
AATGAAATGAACTGCATGCTCTGATTTCCTAGTTTCGTCCATGCCCACCTGTATAAAACA
AAAAACCAGACATCTTTAGGCAAGAGGCACGGGGTAGATCAGAGGCGACAAAAACATACC
TCGTGAAGGTCACCCTCTTTTATTTTAGCATTTTGTTTTTCACTCCAACCAAACAACTTT
CCTTTTTTTCGATCTCAATTGTGTTTTCTCTCTATGAGTAGTGGAAATCGAGGGGATCCA
ACTTGCCTTGTATTGTATGTGATCTTTTGGAAATCAACCTTCTACATTTCGAAAACACAA
AGATAAATCCAGGTAAATTACCCCAATTCTCCATAGGAAGGATACCAAAAAGGCGACACA
AATAATAATTCAATAAGCACCTTCATACGACAGCACGATAATCCAACAAAGAAAACCACA
CCAATACATGTATCATAGCAAATTAGCTAGTGACAAACACGGATGCTAGTATTGTACTAT
GCTAGCTGCAGTAACTCTCTAGCTAGGAGGTATTTGTAGTATACGGCGAGGTGAGCAGTA
ACTAACAACAAATTAAAGGGTGATCTAGTGCATGGATCGATGAGAGTTCCATCTTTCCAG
CTGGCACATTGCCACGGTGTGCTTCCGATCGAAGCGGTCGCTAGCGGTGCGCCGACGCTG
ATGGCGGTGACCCCGCTGCCGGGAGGTGCGCCTTCGGGGGACACTGGTAGCATTTGGCGA
AGAGGCCGAAGGTGTCGATCTGTTTGACGAAGTTGGTGACGCTTGCCCAGCCGCCGAGCC
CGAACCCGACCACCACCACCCACGCCACCACGAACACGTTCACCACGAACATCCCGCTCC
AGCTCGGCAGGAACGCCGGCGGCTTCTCCGCCGCATTCTGTCGATTCGCATTGCATCAGA
TTAACAAGAACGCATAATGCATGCTGACAACGGCGCACACTGCTGGACGTACGTGGACAA
AAAAAGAAAGCTTAATTACCGATCTGGCGTAGGCGGAGCGGTACGTGAGCATGTGTGCGA
CGGCGGGGATGATGTAGACGGTGAAGCTGACGAGGAGCGCGCCGACGGCGGAGTTGATGG
GCCCGAAGAAGGGGAAGATGATGGCGAGGAACCAGATCGGGACGACGATGGGGAGGCGAG
CGAGGGCGCGCTTGAGGATGCTGCCGGTGTGGTGCATGCCGATCGTCTTCTCCCACACGA
AGTAGAGCGGGGTGCACGCGAAGCCGAAGGTGATGAACTGGTGGATGAGCATGAGGATCA
CCGCCGTGTCGCGCCACCCGGACTTTGGCAGCAGCGACAAGGCGTTGGAGTGCGTCAGCA
GCGCGTCGCCGAACGCCCAGTACATGGTCGCCGCCGACGGCAGCGTCAGCGTGAACACGT
ACAACGTCGCCACCAGGTAGATGTACTTGAACTTGCGCGGCTTCCACATCGCGTGCATGA
TCTCGCTGCATGCATGCACACAACCAAAATCAGTTTCTCTGTAAGAAGATGAACGTGGAT
TTTCGAAGCATAGGCTATCAAACACATTTTATCTTTACCCTTCAATGTTGTTTAAAGATC
TGTGCTACACAACTAACTTACTACATGAGACTTTCTTTTTTTGTTTCTATCACATAAAAG
AACATATGAACTTTAAACTTTGCACGGCAACAAAACATTCTTACTATACAATGTGGAAAA
AAACTCTCAGATTTTTCGACCAACATAAATGTACAAAATGAGTTTTTTTTCAGATTTTTC
CATCAAACATAAATATACAAAATCAGTTTTTTTGAGTAAAAAAACTCATTTTGCATATTT
ATGTTGGTCGAAAAAATATGAAATTTTTTCTCCATATTGTAGTAAGAGTGTTTTGTTCTC
GTGTAAAATTTGATTTTCATATGTTGTTTTATGTGGAAGAAACAAAAAGGACAAAAGTTC
TTGCACGAATCATGATGCAGAAATAGATAACTAGACAAGAAGGTGTACCAAAGCCTATGT
TTTCTCAAATGTTAACTGTAAAAGGATTGTCAGTTGTTTCGTGCCATCATTGGTGGGATT
TCCCTAGGGCCAAAGGGGTCATCGCTCCCCTACTCTAGAAAACCCCTTATGTGCATATCC
TTATGAAAATGATAAGTACATGACGTCAGGTACAAGTACATGGCAAATTAAAAGTTTCAA
TGGCAATTCTAGTGACGTAAAGATGTCAACTTAGTTGACACATGTAGCAATTTTATGTTA
AAATATAAACTGAAGCACGAAGTTGTCATGCTTGCCGACTAAAGTTATCATAGTTGCATC
ACTGAACTTGCAATAAAAAACATTCGATTTGTCATGTGCTCGTACCTGACGTTTGGCGTT
ATCAGGTTCCTAGCTACCCTTAATGTTGTGCTTAAGTGTCAAATATTAGTCAAAATCAAG
AATAATTTGCATTCTTTACCCCCTCACACTGCTTAGCCCCTTCAATAATCTCTGTCAAGC
TCCGTGCTATAATACTAAAGCTACTACACTGCATGAATAATTTCATGGAAGAAACAGCTT
GCCTGATCAGATCAGTTATTACAAAAAAAGAAAAGGTAAAAGAAAAGAGAAGGAACTGGT
CATATTATCATAACTGTAGGCAGTTGCATATATACAGAATGAGATCGAATAAACCCTTTG
GAATTAGCGTACTTCATACACATGCTTTATAGTTGATGGAATGAAAAGTGGTGCTTCTCC
TAGTCAGGACATTTAGGAGGACGGGGACGTGAGGAATATAATCTCGCCCAACTTTCAACT
TTCACCAGTACTATGCACTATATCACGAGGCCGGCATTTACAGACAAATTAAGCCGTTAT
CAAGGCCAAATGCGTCATCGAATTGCTTCAAGCAAGAAGGGCACTCAAAACTGACGGATT
TTGGATGGAATACCCAAAGTAGACCACTTGCGCCTTTGTCTCTCCACTAACCAAAGGTTG
CTAGTTGCTACTAATAGACCGGAATTACGCACAAGCGATGTCCCGCACAGGCATTGATTT
TGTTTACTTGATGTGAACTCCGCACTAGCGAAATGGAAACCAGTCCACATCATATGATCC
CTGGAAAGAGCATTTCTTATCGCTGCAAAAGGAAAACGCAGCTGAATTCTTAAGGCAAAG
GCCTCTGTGATCTTTTTTCTATAATACTACAAGGTCTCTCTAATTAACAGCTGGGAGTTT
GAACACCCCACTGGTACTGATTATTCGTTCACTTTGGCTATAATCATTAGCCGCGGCACG
AGGATCATCGTGGATGGCAGCCTCTCATAGATTAAGTATAGGGATCAGGGAATGAACGAT
GGAGAATAAAGGCTAGCTTGTTCATGGGGAGTATTGAAATTCATAGATAGTGCCTAACGG
AGGGCATTGAGTAGGATTGTAATTGTTGATCGCCTAGCTAGCTTTAGTGCCTACCGACGG
TAATAAGCAAGACAGCTGGTTTTCCACGAAGCATGAAACATTTTTAACTCATCTGGATTG
GTATGTTTGCCCAAAACAAATTTTATACTACTACTCATGATTCCAAGTTGGCCAGGAAGG
AGGTGGGGGACCGACGACAATGCTGTGCAAACAACACTAGATTTTCAGTTTTCAACTCTA
TCCAAGTCCATGACCTCCCCTTAGCATAGCGGATTTTTTCACGATTTTGATCCCTGGGAT
GAAAGTATTTCACGGAATGAACTCTGACTGAAACTATTTCACGATCTGACCTTTTTTGAA
ACG
