Contig Data
morexGenes
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Map Locations of contig_136741 (6734 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_136741

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_5818 1 1815 bp AK363200 Available Available None
MLOC_5819 3 1133 bp MLOC_5819.2 Available Available LOC_Os10g07534.1, FRAME:+2, EVALUE:8e-83, 13110.m07650 protein disease resistance protein RPM1, putative, expressed





CDS Structure of MLOC_5818






CDS Structure of MLOC_5819






Contig Sequence (6734 bp)

>contig_136741 6734 assembly3_WGSMorex_rbca.fasta
TGCAGGCCCATAGGGACGTCTGGTACCAAGCAGTATACATATATCATATATATGACACGA
TTTTAGATCGTTCTGTGCACCTCGCACGTTATTTGCTTATTTGCTTGCGCCAACAATTGT
GGTTGCACGGCAAGTGCCACGCGCTGTTTCGATGAATAATACGCACAATGCGTTTATTTT
TGGACTACCTATGGAATGTCAGTTTGTTGCTCCCTCGTCCGAATATAAAAGGTCTAATAC
ATACTTTGAGTTTCACCTTGACCATAGATTAGATCAATATAACATATGAGAATTCCATTC
AAATATGAATAAAAATATAGTTTTAGTTTGAAATATACCAAATGGAAATAATATGGATGG
ATTTTAGTGTGCAACTAGGCATGTGTGTCTCTGATGCAAATCCCAACATGTATTGGCCCA
TGTATTAGAATGAACCGTATTTTTGTTGTATACGAAAGTTTGGCTACCCCGGACGGCCGA
TCATGCTGGCCCCTAACATGGCGTCGTCATTGGTTTGCTGCCCCGTTCCACCTTTCAGTG
GTCCTTTGTTTACCGTAACACTAGCCCCGTGACCAGATCTTGAAGAGGAAAAAACTACGA
CACCAATCCAAGGGGGAATAAAAAAGAAATAGAACAAACAGGACCCCATGGTGAAAATCA
ACGCGGGAAAACACGCAGTCGATTCTAATTTCATACTTTATATGTTTAAAATTACTTGTT
GTATAAACAATAAATAGAAATAAATGTATCTATACCTAAAGAATGGCTAGATACATAGTT
TCTACGATAAATAATGACAGACGAAGAAAGTATGAAACAACAACTTGACCAAAACCTTTG
AAGCTGTACAGAGCAAGCACCCCTTAGCTAAAATCAAAGATACCTACAAACGGGAACAGA
CCAACAATGCGACTAAGAACAAGTATAATAAGGTGACATAAGCAGGCTATAAAGATTAAA
ATGTTACATCCTTGCTTAGTTGGAGGAGAAATAGGAGAAGAGAGAAAAGAAACGGACTCT
TGGTAAGTAGCCAGCTGCAACACGAGAACCAAGACACTTTGTGAGATTTTAAGTTGACGA
ACTACTACTAAAATAGTACATATTTAAAACTTACTATTGTATATGTCGGCTATAAGGTTG
ACTCTATATGACATGATAATTTTTTATAGTCGATTGTTGGATGTATTATTAACCATGTTC
TAAGAGCCACGCGTGACACTCAAACATAGGGCCACGTCTCGAGATGGAGTTCCACGTGGG
CGGAGTACTACGTACCAAATTGCAAAAACTAAAATACAAATGCTGTATAGGTATCCGTTG
AGAGCTAGCACGCCTTGGGTCCTGACCACCCTGGTTTTGCGTGCTTTTAAAAATAACTCG
TCAGTCCACTTGGGGCTCGTGAAAATGAGCTCAAAGCCTCAATGACTATGGCGTAGGCTG
TTGAAAGAGACCCATTTCAAATCCTCAACACAACCATCAACCATCAATCGAGAAAAAAGA
AACCAAGAACCATGGCGGAGGCCGTTGTCGGACAGCTCGTGCTGACGCTCGGTGGGGCGT
TGGCGAACGAGGCGGCGACCTACGGTGGGGCGCTGTTGTGCAAGGAAGCGGCCGCACTGA
GGGGTCTCTTCGGCAAGATCCGCCAGTCCAAGGTGGAGTTGGAGAGCATGCAAGCGTACC
TGCAAGAGGCAGAGCGGTTCAAGGACATCGACAAGACCACTGCCATCTTTGTCGGCCAGA
TCAGGGGCCTCGCCTTTCAGATCGAGGACGTCGTCGACGAGTTCACCTACAAGCTGGAGG
ACTGCAAGCACGGAGGGTTCGCCGGCAAGATGAAGAAGCGGCTCAAGCATATCAAGACCT
GGCGGCGTCTGGCAGCAAAGCTCCAAGAAATCGAAGCCCAGCTGCAGGATGCCAACCGAA
GGAAGAGGGATTACGCCGTCACCGGAAGATCTGCTTCTGCTCCAAGATCAACGAGAGAAG
GTCAAGCTTTGCACTTCACAAGGGATGAAGACCTTGTGGGAATCAAAGAGCACAAGGAGA
GGTTGATACGATGGCTGACCAGTGGTGGTGATGGTCTGGAGCAGAGCAGCAGCAACGTTA
CGGTGGTGTGGGGGATGCCTGGTGTTGGTAAAACCACTCTTGTTGATCATGTGTATAACA
CCATGAAAGAGAATTTCGATGTTGCAGCATGGGTAACTGTGTCGGAGGGTTACCGTATTG
AGGATTTGTTGAAGAAGATCGTCGCCCAGTTCGGCATCACAGTCAACGTCGCAAACAATG
AGATGAGAGGCCTATCAAAGTACATCCACAACTACCTTCAAGGTAAAAGGTACATCTTGG
TCTTGGATGATGTTTGGGCTGAGCGCTTGTGGTCCGAGATAAGGGATATCTTTCCAACAT
CTAATTGTACCAGCCGAGTTATTATCACATCAAGAAAGCAGGCAGTGTTGGCAACCAGGG
AGTCTGCATCTGCAATTCACTTGGAACCGCTAGAAGAACATTACTCCTGGCTGTTATTTT
GCAAAGGAGCCTTTGGAAATACTGATGACAAAGAGTGTCCACTGGAGCTGCACGAATTGG
CTTGGAAGTTCATAGCAAAGTGTCAAGGCTTGCCTATTGCTATTGCATGCATTAGCCGCC
TACTCTCCTGCAAGCCCAAAAATTCCGTCGAATGGCAGGATGTGTACCAGTGTTTGGATT
CCCAGTTTGCGAAAGATGTGATCCCTGATGCTCATATGATCCTAAAGGTCAGCTTGGAGG
ACCTTCCGTTTGATTTGAAAAATTGTTTCCTCCACAGTGCATTGTCCCCAGAAGATTATG
TACTAAAGAGGAGGAAGACAACGAGACAGTGGATCACAGCAGGGTTTATCACGGTAAAAG
ATGAGAGTAAAACGTTGGAGGAAGTGGCAGAGGGATACATGGTTGAGCTTGTGAACCGAA
GTCTATTACAGGTAGTGGAAAGGAATTATGTCGGACGACTTAGAAAATGTCGGATGCATG
ATGTCATACGCCTTCTTGCCCTCAACAAAGCCAAGGAGGAATGCTTTGGTAAAGTTTATA
ATAGCTCTGGTGGTGGTACTGGGGCATTCTCTGTAGAGGGTGCACGTCGCATATCTGTCC
TAGGGGAAAACATTGAACAACTCAGCCTATCTGGTGCAACACAGCTTCGTGTGCTCCATG
TATTTGCGAAGTCTACCAATGTTGATTTTCTGCAGCCTATCCTAACAACTTCAAATCTGT
TGTCTACGTTGGAACTGCAAGGTACTGGTATCAAAATGCTGCCTAATGAAGTATTCGACT
TGTTTAATCTGCATTATTTGGGTCTTAGAAATACCGAGGTTGAAAGCCTGCCTGAAGCAC
TCGGGAGGTTACAAAACCTGGAAGTCTTGGATGCTGGGAATTCTAAGCTGACGTACTTGC
CAAAGAGTGTTGTGAAGCTTCAGAAGTTGAGATACCTGTATGCGTGTACTTTTGCGGGCA
CAATGGGAAGTGCAGTTGGGGTCAAGGTGCCTAGTGGCATGCAGCACCTCACAGGACTGC
GGGCTCTTCAATCTGTGAAAGCCACTACTGAGTTTCTTCGTGAGGTTGGAGCTCTGACAG
AGATAAGAACATTCGATGTCCGCAACGTGCAGAGTGAACACTCTGCTGACTTAAGCAATG
CTATCACCAAAATGAGTCATCTTGTTCATCTTGAAATTAGCACTGCAGCTGAGGATGAGG
TGCTGCGGCTGGAAGGACTATATTTACCTCCAACCCTTTCTTGGCTTGGTTTAGGCGGGC
AGCTAGAGAAAACATCAATGCCTCAGCTTTTCTCTTCTTGGTCACATCTTAATAGCCTTA
CTCGGTTGACCCTGGAATTCTCCAATATTGATGAGGAAACCTTTTCCTGTTTGCACGTGC
TAAGTGGTCTACGCTTTCTTCAGCTATGGAACGCTTTCAAAGGGAAGAGGTTGGATTTTC
ATGCAGGGTCGTTTCCAAAGCTTAGGCATCTACATATATGGGGCGCAACACAACTCAACG
AAGTTAGTATAGAGGATGGTGTGATGCAAAACCTCGTCGAGCTGTGGTTCAGAGACTTCC
CCAAGCTGAAGTTTCTTCCTGATGGCATTGAGCACCTCGCAGCCCTTGAGAAATTAGTTT
TGATAGATACATCAGAAGAGCTGATAGAGAAGCTCCTACAGAAGAGAGATTCAGATGAAT
GCAGCGAAGATATAATGAATATCAGCCACATAAGGAATGTTACAGTTGCACTGACGCAGA
AAGGACTTGTCGAAAGGATTAGGTGATACATCGTCACTGCTCCAAGGTCAGGCTTTGGTG
TTTCTTCCCCATTGTTTTGTGCGCATCCCACACAATATTTTTTTACTGAACCTTCTCCTA
TATTGGCAGATTAGAACAACTAGTACTAGATCCTAGTAGTGTCAATTTATTACGAGCTTG
TCAACTAAATCTAACATGATCTTTCTGCATGTTCATGTGTACCGTCACCTGACTTCATAG
GACAGAACTGGTAGGGTCGACCTGATCGTGCAGTTTTCAATCTTTCAATCTTTCATACTT
GACTAGCTATCCTAAATTAAAGTTTGTAGAAGACAGAAGGGTGTGTGCTTTCAATCTTTC
ATACATGACTAACTCCATAGGACAGAGCTGGTAGGGTCGATCATAAAAACAAGTATTGAC
TGATCATGCAGTTTCCCAGTATGTGGATGTTCCTTAGTTTGAAGTTTGTCGAAGAAAAAG
GATGTGTGCTTCAGTCTTTCATACATGACTAACTAGGTTAAATTAAGTAGCTTTTGAAAA
GATACATATTCATTCACCTTTTTTTAGTTATGACGAGAAAGAGATTTCTTCACTGCCTTG
ACTGACTGACTGAATTTGCAATTTTTATCAGATTCTCCGCTGTCAGGCAAGCTTGGTTGT
CTCCTTAAAGGCCGATTCTGCACAGTTGGATTCTTAAAGGCAGATGTATACCTTCGTAAC
TGCAATGATTTCTTATCTGTAAACAATGAAAACAACTGTGAGTCGACGGTGTGCAGTCGA
TCTATTATATATGCTTAAGGGGGCGGAGAACATGAGAGGCTCCACAACAATGCCAACACA
TGACGGCTTCTTCCATATTATGATCTGAAATGAATATTCTGCTCATCAGTTAGTGGTAGT
TTCTGTTTCCACATCAGCTTCCTTGGGCACAAGCTTCAGCGTGTCTGCATCTAAGCACGA
ATGCAACGGCTGTACCTGATGTCACCGATTCTTCAGGAGTAGGAGCGCTTCTTAGCCGAT
CCATCTTTTGAGCTTTTCCATTTGTGTACTACTGCTGGCACTTGTAATGTATGTAAGCCG
TACTCGGCACTTCACAATCTACAAGTATCTATTCCTCACTATTCAGCAGGCCATATGCTA
CTGCAAACTCAATATTGAATTATGCTGCTGTGAACTAAAGAGTGCATTCGATGAATTTTT
GATGAATCGATATATATAAAAGTTTTTTTATTAGTCACGTCAGAATCAGAATGCAAGTTA
GCTTCTCAGTGATGTTGATTGAATGTTGGTCCAATAATGCAAAGTTCCTTTCTTGCCTGC
AAACGTATTTGCTTCTACATAAGAAAATAAATGTGTTTTCTTTCTCACCTCTCCCATCAC
AGAAAAACGACAGTCCTTCCAAGGACTGGTTCAAACATTTACTTATATTGGAATTTGCAT
CTAGGAGTAATAACAAAAAATAGATAAGCAATTGTATTTGAGAATGGCGTTTTGGAGCCC
GGCCTCCGTGAAGGCCGAAATTTTTGAAAAAATCAAAATTCGAAACATTTAGTTCCAAAA
AATCTGAAAACAAATATACAACTAAACAAGGATGTGATCCGTGTGTGCTTAAAATTTCAG
GTCGAAATACTTTGAAACGTGATCTGTACAAAAAAAGACAAATTCATGGTCTGAAATGAT
GAATAGTAACATGTGTTAAAAAGTTCCAGATTTGTTTTTTTTACACAGCCCTTATTTCAA
CGTATTTTCCTCTAAAAATTTACACACTTGTGTATTATACCTTCATCTATCTATATATTG
TTTTTCAGAATTTTTTAAAATATTAAAATACAAATTTTCATGAAATTTAAAGTTTGAATT
TAAAGGCCTCCATGGAGCTCGGAAGCCAAAAGCAATTTCCGGTTGTATTTTTCAAACTTA
AAATAAAATTTATCTATTATATTCCTCTAATTAATGACACTAGTCGTCAACCCGTGCTAC
TGCACGGGCTAGGAATTTTTGAAAATTTAAAATTTTGTACGTAAAAACTTCCAGCAGTTA
TTAACTTAATATCTCATACAAATCGTAAGTACGAAATATTAATAATTATTTTTATGACTT
ATTTTCATAGCGTACAAATATAATATTTCCTTACGCCCTATACTTAACACATAGTGTATC
ATCATATATCTTTTCGTATTAATCCGTGTGCCACCATAAAATATGGTGACACCATTATAC
ATATTTAATTGTTCATTAGTTTACAAATGGCTAACTGCATATCTATATGTCCTATCTATT
TAACACTATTATTATTATACACTTATCATCTATGATTTTGCTCTCTAACTCTCACTATTG
GCCGGTTACTCCATATTTCCGCAAGCATACGTGTGATTAAATATTTCGAAAGTATGTGTA
ACAAATAACCATTCTTTGCATCATTCTCCGGCCCATCCGTATGTATTATCTATGTGTGTG
ATACACATGCGCAT