| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_136687
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_5781 |
1 |
1345 bp |
MLOC_5781.1 |
Available |
Available |
LOC_Os12g38610.1, FRAME:-2, EVALUE:6e-177, 13112.m03980 protein lectin-like receptor kinase, putative, expressed |
| MLOC_5780 |
1 |
865 bp |
MLOC_5780.1 |
Available |
Available |
LOC_Os12g38610.1, FRAME:-3, EVALUE:4e-75, 13112.m03980 protein lectin-like receptor kinase, putative, expressed |
CDS Structure of MLOC_5781
CDS Structure of MLOC_5780
Contig Sequence (4675 bp)
>contig_136687 4675 assembly3_WGSMorex_rbca.fasta
TCTAGCTTGAAGCTTGAGTCAATATTGTTCCTTTCTTGCATCCAGGGACATCTCCACATA
AACCTTAAGCCATGACATCTTTTGAAGTTTTCTAAAATATACTTGGAAAACATATTAGCT
CAATGATGTATATGTTGTGATCAATTATCGAAACCATCCTAGGGAGCAATTGTGCTTACT
ATTGCAAAGACAATCCCCGGCCGTGTCGGAGAGAAGAGAAAAAGATTTTCCAGAGAGCAA
GAGAGTGCTAGGAAGGACGTCGAGCGTGCCTTTGTTGTTTCCCAATCTTGATGGGGCATC
GTTCGATACCCTGCTAGGACTTGAAACACCAAGAAGTTGTGAGAGGTGATGACAACTTGT
GTGATTATGCATAATATGATCATCGAAGATGAGCGTTCGGAATGTATTTACGATCAAGGG
TTTCAGTTTCAGCATGAGCATGTTGTGCGTGAGCATGAAGGAGCGGCAATGTTTGAATAG
TTTGTTCAATTTCATTATGAAATGCATGATTGGAAAATTTACATGCAACTGCATGGTTAA
TTATATGTGTGCTCATGTTGTCAACCAATAAGTGTATGTTTTTCCATATGTATTTGTGAA
AAAATAATTTTTATTTGGTTTGTAAAACTATACTTATTTATTTGAAAACTATGCTTTATT
TGATTATGAAACTATGCTATTTTTTTATATGTTTGCTTATCAAATAATGCAAAACGTGTG
AATGTTTGTTGAAAAAGTGCGATCATCCGGCCACGTCGGTAAATATAGGTCGCGGACGTT
AGACGCACTGCCGACCCAATTGTTAAACACGACGGACGTCGAACGAATGATCAACCCAAA
CGGATAAAAACAGACAAAAACGCCACCATTTGAATCAACGCGTTGGATTGCTCTTAGACG
TAGGATCGATTTAAGCAACAAAAGAATTTGTTTTTAATACTGCGTCGAGAGAATCTTGAA
CTCAACGCTTCTTAGCTCGGATACCATATACACCCTTCGTTTCTAAATATAATTATTTTT
AAAAAAATTCAGCAGGTAACTAAATACGAAGCAAATAAATAAATCTAAACCTGCATATAC
ATTCGTATATGGTGTTTTAGTGAAGAGAATGGACGTTTGGTTCCCGGCAGCCATGGAGGC
TTTAAGAAATTCAAAATTCGAAAATTTTGGTTCTAAAAAATATAAAAAAAATTATACAAC
TAAACAACTATGTGATCCATGTGTGTAAAATTTCAAATCAAAATACTTTGAGATACGATC
TGTAAAAAAAAAAAAAATTCATGGTCTAGAAAGATGAACAGTATCATGTGTTAAAAAGCT
TCAAATTTGTCTTTTTACATAGCCCTCGTTTCAACGTATTTAGTTCTGAAAATTTACACA
TTTATGTATTGTACCTTCATATATCTATGTATTTTTTTCATATTTTTTTGTATTATTAAA
ATATATTTTTTTATAAAATTTAAAGGCCTTCATGGAGCTCGGCCTCCAAAAACAATTTCC
GTTTAGTGAAACTTTAAAAAGATTTATATCATTTAAAAATTCAAATTATAAGAGAGGGCC
CGGACAACACTTGTTCCAGTGCACTGCACATGTTGATCCACTGACCAGAGGATGGCTCAC
GGTGTGGGGGGTCATACACTGACGTGGGATGACCGCATGGACAGCGGCGAGAAGGGGAAC
GTGGCCACCGATGTCTGCGACAGCGGGTCCCCTCCACCGGCAGCCGCCGCCCTCTCGAAC
GACGACGACGGGAACGAGTGCACGAAGTCGTCGTACCCAACCTCGCCGGAGCACACCGGC
GGTGGCGGTGGCGGCGGCGGTGGCGGCGGCGGCGGCACCTCCGTGGCGTCCCCGCTGTCC
AGGTACCTCGCCACCTCCCTCATCGTCGGCCTCGCCACCGGCACCGGGTGCGAGCACCAC
AGCCCCAGTTTCACCGCCACGGCCGCCTCCTCGGCGTCGAACGACCCGCCCAGCCTCGCA
TCCACCACCTTCTCCACCTCCCCCGCCGCGTACCGCTCCCACGCCCACTCCACCAGCACG
AGCTCCTCCGGTGCCGCCCGCGGCTCGATGGGACGCCGCCCGGCGACCACCTCCAGCACC
AGTGCCCCGAACGCAAACACATCTGCCGCCGTCGTGGCCTTCCCCGTCCGCGTCAGCTCC
GGCGCCAGGTACCCCAGGGTGCCCACCACCCGCGTCGTGGCCGGGTTCGCGCCGTGCTCG
TACAGCTTGGCCAGCCCGAAGTCGCCGAGCCGCCCCGCCATGTCGCCGTCGAGGAGCACG
TTGCTTGCCTTCACGTCGCGGTGGAGCACCACGTGCTCCCACTCCTCGTGCAGGTACAGC
AGCGCCGACGCCACGTTCCGGAGGATCTTGTACCGGACGCCCCACGTCAGCCGCGCCGCC
CGGAGGCCGTCGCCGAAGAGGTGCATGTCCAGGCTGCCGTTGGGCATGAAGTCGTAGACC
AGGAGGAGGTCGCCGCGGCGGCGGCACCAGCCTTGGAGCTGCACGAGGTTGCGGTGGCGG
AGCCGGCCGATGGACGCGATCTCGGCGACGAACTCCCGGAGGCCCTGCCGGGAATCGTGG
GACACGCGCTTCACGGCGACCGCGGTGGGGGGCGTGCCAGGGAGCACGCCGCGGTACACC
TTGCCGAAGCCGCCGCAGCCGAGGAGCTCGCGGTCGCGGAACCCTCGCGTGGCGCGCTTC
AGCTCCGGGTACTTGTACCGGTGCGGGCCGTGGTCGAGCTCCCACGGCTCGATGACCTCG
CGGTTCTTGATGCGATACGCAACGTAGGCGCCCGCGCCGGCGAGCACCAAGAGCGCCACA
AACGCCGAGAACACCGACGCGAGGATCAGGGACGTCCTGCTCTTCTTGGCTGGCTTGGGC
CTCGGCAGCGTTGGGAGGGACGACGGGTCGAGCGGCGGCGCGGCGCCGCCGCCCAACTTG
AAGCTCCACCCCATGAGGTAGTGCGAGCTCGCAAGGAGCCCCGTGGACGCCGAGAAGCCG
ACATACATCTGCTCCCGGAAGACGACGGACAGGTCGACATGGAAGGATATGAGCGGTGAC
GCCGGCTTCTTGGGCGCCGCCAAGGTGGCGATAGTGACGTTGAGGAGCCTCCGGTCCCCA
TCGTAGTCGACCCAGGCGAGGACGGTGTCTCCGGACTTGAGGTTGATGGGCGCCGCGGAC
GCGGACGCGTTGGAGGTGAGGCTGTTGAGGTCGACGCCGACGTGGTTGTCGTTGATGTCG
CCGAACTCGAAGTCCTGCACCGTGTCGAACTCGACGGCGAACACGTGGTTGGTGGCGTTG
CCGTCGTCGTCGGCGCTGACCAGACCCAGGTACTGGCTGGGCAGCGCCCCCGGGAGGCGC
GGGTCGGGGGCGACCACGAAGGCGAAGCCGTGGCCGCCGAGCCTGGGGTACTCGGGCACG
ACGGCGAACGCGAACGCCGTGGAGAAAGACGCCGCTGCCGCGGTGGCGTTACTCTTGCCG
GAGCCGGGCGGGCCGAGGAGGCGGAGCGGGGACGGGTAGAAGGCGTGGCCCTTGAGCCGG
GAGGTGTCGTTGGTGAGGCGCATGATGCCGTCCGGCTGGAGCTCCGTGACGCCGTTCAGA
GTGAGGTTCGGGGCGCCGCCGTTGCGACCAGCGCCGAAGCCGGTGTAGGTGAATTCTTGG
GAGGCGGCGAGGGTGGCGAGGAGGAGGAGGAGGAAGGCAGCTGAGATGAGAGGCATTGCA
TTGGAGGCGGGGCTGGTCAGCCGATGTTGCTGCTGTTTCTTGTGGTGGGTGGGGGGATGG
ACGGAGGTGTTAAATGGCGGGCGGGGTTGCTGGTTTTAAAGGGAGAGGAGTGAGGCAGTG
ACCAGTGAGCGTTTAATCTGACTGACCGATCCACCTTCGCGTTCCATCATTAAATTTTCT
TTCCCTGATCTTCTTCGCCATGAAAAAAGATGAAAACCTTTCTCACATACTAGTAGTACT
ACTAAAATACATTAGCTGGCAAGACATCTAGAACTTCCATTGATTGATGGGGACAGTAAT
TCGATAAACTTGGTCAAGGTCAACAGTGCCTTCTGGGTACTGTAGGATCCCTCAACAGTG
ACATGCGTCTCCCGTTAGACGAAATTAATGTCTGTTTGAGATTGAGATACTCCATCTTGA
TCCGGCATTGCCATTTAAGCTTGCCCAAAAGTGATCTTGGTAGATCCACATCGCGAAATA
TCTGGCCGCCAATGACCATGTACGTAAAAGCTAGTACTAAGTTTATTGTGCAGGTCAGCA
TCTTGTCAACGGGATTAGTTGAACAAGGTTGAAAACGCTCCAAGTCGAAGAGGGAAGAAC
TGTAGCCAGGATAGCAGCCGGACGATGCCCGGAGTGCAAATGCGCATGGCTGTCGTCTTC
AACGGGCACACTAGCCCACACCCGGTACAAACCGATCCTTAAAAATCATGTATAAGAGCA
AGTCTAGTAGAACCTCAAATCCTTAAAAATAACCTTTTTTTACAGTTTTCATCGAAAAAA
GACGTAGACTAGAACCCTTAAATCCGTAAAAAAAAATAGAGGTCCAATCCTCAAACGCCT
TCCCAACCTGAAGAAGTGAGGGTTGGGAGAAAAAAACTCCGCCCAACCCGCACTCCTCTT
CCTAGATCGCGCGGGAGGGAATTCCCCCCGCCTCCCCAGCTCCTCCCGCCGCCTC
