| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
 |
Predicted Genes from contig_136624
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_5735 |
2 |
1514 bp |
MLOC_5735.2 |
Available |
Available |
LOC_Os11g04010.1, FRAME:-3, EVALUE:1e-146, 13111.m00345 protein ICE-like protease p20 domain containing protein, putative, expressed |
CDS Structure of MLOC_5735
Contig Sequence (5380 bp)
>contig_136624 5380 assembly3_WGSMorex_rbca.fasta
ATGAGGGTTTTGACCCCATGTATGTCTCATAGCACATCACACCAAGCTCATCTACCAAAC
TACCCACACACACAACACCATGCCCTCTCACATATTGTCATGTGAAGGTACATAGTTTGC
AAAGGTGGGAAAGATCCACACACAACACCATATCAATTTGCACATGGCTATCAAGGCACC
CCATGCCTTGTCATGTGTGTGACTCACACACACAAGCACTCACATCTTGCACACACCCAA
GGTTTGTGGGAGGGGATCCACACACACACAAGCACATTGCTTGCACCAGCTAGTGCAAGA
GCTCACCACCCAAGCATACATGAGAATCCACTCACATACATGCTACTAGCCTAGTGCTAC
ACACACAACTAAACACACCCANACATACATGGCATCTAGCTCACAAAACACATTTGCAAA
CAACCAAAACATAAATTCCTACCAAGTTATATCTACACATGCACTCTACCTACGTCGGAC
TTTATTTATACACGTTTAATATTTTTAAAATACATGATTAAATTATTTTACATATTTTTT
ATCTGCTTTTTTCATACACATTTTATGTTTTTTGCATACGCCACAAGCATTTATTTATAC
GATGATCCCTAGGCTCCGAGTATATGATGATAAATAAGTCTGATGTATTTGTATTACTCA
AAAAGTGAAAAACCTCACATTGATAGATACATGCACAGAAGTATGATCAAGGATGAAGAC
AAGAACATCTATGCAAGATGTAAAAAAAAAGAGAGCAAAGACAAACTTTTTGTGTGCCTG
CACAAGTATATTGTTCTTTTAACACAATATGATTGTAGATCTTCACATGCATGCACATAC
ACTCATCATTTTGAACATACGCACACACCCTAACCTTATGGGCATCTTTAAGATACTGAA
CCGACATTATAATTTGATATTAACGAAGCCATCACATATAAGCAAAAAAATTTTATCAAA
AAACAATAAGCAAAAAAAGAACGTACAAGAAGCAAAGACATAGTTGCAAGTGCAGATTTC
ATGACTTTTTTTGCAAACAAAAAAGATTTCATGACTTTGAAGCTACAACAATGACACGTG
AGAATATGCAAGTGAGTGATAACAAATCGGTGTATATATAATGGTAATACAATACATAAT
ACAGTATCCGCAATTTCTGTATAGTACCGTGTCTGGAGATGTGGAGATCTGTACCCACAC
ACAAACAATAAAGCACTTGAGTTTGGCTCCTCATCCAAACATGAAACATAAAACACGACA
CATGAAACACATTGCCCGCTCCGTAGCACGTGAGCTGAAGGTGCTCTACAGCAGCGCCGC
GCCCACCGCTGCCTCCTCCTTACCCTGCGAAAGGAACGGTGCCTCGGCGTTGGCGTCCGT
ACAGTAGAGACATGGGTGCTGCTCGAAACCCACCTCGTTCAGCACCGCCCTGGCCTTCGC
GACGAGCTCCCGGTTGCTCATCGGCGTCGGGTGCGCCGCCAGCACGCTCTGTACCGCGCT
ACTGAACGCCCCGCATGCCTTGCCTCCGCTGGCCTCGTACGACGGCACGTCCGCGGAGGT
CTCGTTCGTCTGGCACCCGCTCAGCAGGATGCCTTCGTCCGGGCGCGGCTGCGTTGGCGC
CGATGCCGGTGCCAGTGCGGTGGACAGGGTGCTGCCATTGCCGCTGCGGCCGTGAGCGTG
GAACTTGGCGCTGGCATCAGCGCCGAAGAGTGCCACGAGGTGGTCGGCGATGTGAATGGA
GGAAGGCATGCCCGAGATGGCCGAGAGGTGGTCGAGGAGCGCGACGTAGGGAACGAACCG
GGCGGTGCGCGTGGGCGGGGCGCCGGAGTCGAAGCAGACGGAGGGCCCGATCTGTTCCTT
CTCCTGGTCGATGAGGCCGCCGCTGTGACACGAGTCGGACACGATGGTGAAGCTCGCGCC
CGGCGGCACACGGTCCACCAGCAGCCGGAAGTCCACGTCCGTGATGAGGTTGAAGTCGGA
CGGCACGATCGCCTCCTTCTCCGCGCCGCCCTCGCCGTGCTGCGGCGGGACGAGCGTGCC
GTGGCCGCTGTAGTGGAAGAAGAGCACGTCCCCGGGGGCGGCGCGGGCGACCATGTCCGC
CAGCGCGCGCCGGATGTTGGCCCCCGTCGGGAGCACCTCTGCGCCGCGCACGTCGGTGAG
CACGGCGACGTCGGCCGGTGCGAAGCCGAACCGGGCGACGAGGGTGTCCCGCACGGCGTC
GACGTCGTTGATGCAGCCGCGGAGCTCGTAGGGCGTGCCCACGTAGTTGCAGCCCACCAG
CGTGGCCAGCCTCTTGTTCGTCTGCCCCTCCATCTTCTTGCCTCCCAATCAAATGTATTA
CGTGTGGTTTCTCCTTGGATGCTAGCTTGTAGCTTTTCGCCTGAGCAATGGATGAAGAGA
GCAGTAGGCTACCGTGTGCAGATATATATAGATGCTCTCTGTTGCTTAACTGTGGATGCA
ATGCAAGAAACGTGTGTTCGGGGTTAAGCAATCCATTTCTATATATCATTTCTGATATAT
TTTCAGTTCGATCAGTTAACCTCGTCCGGTTCATCCCAGGCTAGTGTAGAAATACTTCTC
AGCTGGAGAAAGTGTCCTTCTCAACCCGAGCTCCTGTCAGCTCGTATGAGGTCGAGTGAA
CAGTAAAACCTGTCCGTCGTCGGATACCTCGTCAAGAAAGGTTCCACATCGGTTTGTGCG
GTTTTGCAAATTAATCGGCCCGTTAAACTAACTTTGCTGCACGTATTATTGGTTGTGATA
CAGCACGAACAAGACCAAGGTCACATCGCAGGTTGAGATATCGTCCCTCCTTCCTTTGAA
GTGGGGGAGAGAGATCCCTTGCGTGCAAGAAATGTGTAAGCTATATAGTACGTATCTTGC
ATAAATAATCGGGTCTGCCCTCAAGCGTATAAACCTCCCAGTTTACGTCTCTCTAGCATA
TGCTTCAGCCTGGCTTCCATAACTACTCAAATTGCGTAAATGTCAAGTTAAGTATCCTCC
GATTAATTTGGATTGTGTTTGCTTCTACGCATGGATCGATCATAAACTGCGAGGGTTTTC
TTAGTTTGTCAAAATGGTCGTGATAATTAGGACCACGAATATGGACATGGATTTTTGGTG
GCAATGACGTGCACACAATTCCAGGGGAGCTCTCTGTTAACTCCCACGGTTTTGCTATTT
TCTAGGTATATGAAATTTTTCATCGTGTCAATCACTTTTTCTAGTTTATCCCGAGCTAGA
CGGACAAGAAGGGACCTAGCCGGAGAAGAAGTAGCTCCGTTATCTATCTTAGGAGGAAGT
CATAGCCTTATTTTTTTTAGGGGAAGCAACAACCTAATTATTTATCTTAGGGATGTAGGG
TACAGCCGTGCAGGGGTCGTCGGACTTGTTTTCTGGTGCGACGGGGCTTAGAAAAATGGC
CAGGATGACGGCCAACATGGCGGGTGGGGGAGGTCAAGAGGAGGGTGGAGCGACAAGGCG
GCAATAGCCACACGTCGCGAACGGTGGAGGCAGGCGGTTAGGGCTAAGTTGGCCGACGAC
TCCATGCTGAAGAACAAAATGGAGTGGTACATGAAGAGTGCTCCGATGTGTTTTCAACTG
TGGGATAAAGATCTAACAATCCTGGATGAAAGTGATTGATACAATCAAGCACATGGCGTG
TCGTCGGTCCGGTAATATCCATGCATATGGGCATGAATATGACCCTCGATTTTCGTTTCT
TCTTGAGCACGATTTCAGTTTTTTTCCTTTTTAGAAAAGTGAACAAGACTTTAGCTTTCT
TAATTCTAACATGCTCACCTTATTGATCAAGGATAATGTTCGTAGGGATACAATTGATGT
CTAAGGGCCTTGATTTGCAGGATTTTGAAAATACGAGAATAGGAGAAGTAGAGGGTTGGA
ATGACATGCCCATTTAAATTTTATAAAGTTAACAAGGAGTGTTTGATGCCACATGAAAAA
CAAATAAATTGTAAAAATAGACTAGAGTGGATGGATGTCCTATGAAACGTAGTACAAAAA
ATCCCATAGGGAAATTCCTATGTCCTCCATTAAAAGGCTAGATTTTAATTTGTTAAGTAG
TCTATTCACCCCCCATTTAGACATCCCTTCTAGTGATCCCACAATTGTTATCCAAGCTTC
GGTCTCCATAGCCTTTGTTTAATCACCATTGGAGGAAGATGGATGTGTCTAGTTTAGGGA
ATCTTAGTTATAGAGTGACTATTCTCGGTGGGGAGTATTATAGACAATGTAAAGGTGGAA
TGCTTGATATATTTGATGAATTCCATTTGAAAAAATATGTTAGATATCCCTATGTGCCTC
CAATTGATCCCTTACACCCTTCTCATGATGATGAAGTTAATATGCTTGGCAATCTTAAAA
CTGTTAATCTCATCCTTCCCAGAAATGTGCTTTATCAAATGAAGAACTTTGGGTGTGATT
AGACGTTGTGGAAAGATTTGGAGAAAAAATATCCGACTACTCCTTGAAAAATCTTGATGT
CATTTTCCAGAAATCTATTGTCTTTCACAAAATGAAGCCCAATGACCCTAACTTTGATAA
TTGTCTATTTGAGCTTCGTGACCTCATGCGTGCTAAAGGAGATGTCACTACCATCAATAA
CATCAACGTGGAAGCCAGGAACGTTGTTATGGTCGAAATTCTAACGAATCTCTTGATTCT
TGTGACGAGGATTTTCCATTCGACGATGACAATGTGGAGCACGGTTACTATGATGAAGAC
GAGAAGTTTGACATCGAGTATGANNNGACCATGAGGAGCCTAAGTCTTATGAAAACATTA
GAGACTACATGGCCGAAGGAAAGGAGTGGATACTTGACAGTGGATGCACCGATCACATGA
CCAGAAATAAAGATTTGTTTCATCACATCACACCAAACCATGGACCACGAAGGTATGTGA
CGTTTGGAGACAACTCCAAAGGTAAGGTNCTTGGTCTTGGTAAGGTGGCCATATCCCNNN
NNNNNNCCATTCAAAATGTCATGCTTGTTGAGATTTTGGTTTCAATGTACTATTTACGGA
ATTGATTGCCAAGTGTTTCATCGTGATAATCATAACATGGTCTTTACTAGTTCTCGTAGA
GGTGATCTATACATTGTAAATTTCACTAAAAAGTCCAAACCTAGTACATGTCTTATTGCA
AAATCTTCAAAAGGTTGGTTATGACATAGAAGGCTAGGACATGTTGGTATGCGTGATCTT
GACGGGCTCATCAAAGGTGATCATATTCTAGTTGTTGGGGAACGTCGCATGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCTACGTACCCTTGTAGATCGCAAATCCCCTCTCGTAG
