| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_136527
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_5664 |
2 |
3200 bp |
MLOC_5664.2 |
Available |
Available |
LOC_Os06g43690.1, FRAME:-3, EVALUE:0.0, 13106.m04579 protein WD repeat-containing protein, putative, expressed |
| MLOC_5663 |
1 |
2440 bp |
MLOC_5663.1 |
Available |
Available |
LOC_Os06g43700.1, FRAME:+1, EVALUE:0.0, 13106.m04580 protein transmembrane amino acid transporter protein, putative, expressed |
CDS Structure of MLOC_5664
CDS Structure of MLOC_5663
Contig Sequence (10771 bp)
>contig_136527 10771 assembly3_WGSMorex_rbca.fasta
CAGCCCGCCCGCGCGGGCCGCACCCCACCCGAAAAATCCCCCCCCCCCCCCCCCGGTGGG
GATTCTCGGAAGAGATTCAAATGATACCGGTCTTCATACTCTACGGTGATACGAGCTTCT
GGACCGTTGAATCTCAGATCCGACGTCATTTGAGGAGTTGTTGTACCAGCATGCAACTTC
AAGACTCTTGGATGACTTTTTTTGCAAAATGCACAAGTGTTCCCGGAAGGCGTTTGATCT
AATCCTTTTTCGTGAGGGGATCATTCCTCCCTTCCAAACCCGCAATTACACTTGAGGTTC
CATCAAAACATGGTCCTCGCACAAGAAGCGGCATTCCACGATCATTTGTGAGAAAATTTG
AATGAGCCGCCGCGGAAAATCAAATCGGCGGCAATCGACCGGCTGACAGGTGGGCCCGTG
ACGCCAGGTGGAAGGAGGCGGCCAGAACGCAGGCCCCACCCGTCGGTGACAGGCAGGCAG
CCGTACCGGGGGTGATGTGCTCCCACGTGCCCCGGGCACCACAGGAGAAATGCATCTACG
TCTACGGTCTACCCTCCCACGCGCGTGCTACAGTGCGGAGCGGCCGTCCCCACCCGCCAG
TGAGGGCGCACGCGCACGGGTAGCACGGGGTTGGTGCACCCGACTTTACGATTTTAGCAA
GGAATTAACGTAAATCGACCGGTAGCGCTGCCTGGCCGGAAGAAAGGGAAGCAACGAGGC
AACAGCAGGGGAGGGACGAAGCTCACCAGATCTCCGCCCTCCAACCCATCCATCCATCCA
TCCGTCGCCGGCGGCGGCACATCCGCCTCGCCAGGATCCTCGTCGGTCCCTGCTCCGGCA
GAGCATACGGATCTCCGGTTGTGTGTTTCTCCGCCCGAATCTCGCCAAGAACCGAGATTT
GCCCCGGCGGCTGCGGCCAATGCCGGCCTGGTTCCCGTGACGCCTTCCCGGCCTGCGTGG
CGGGGATCGGGATCCTGCCCCCTTTCCCGCGCGGTGACCTGGTTCTTGCTTTGCCGGAGC
GGCGGATTGGGCGGAGATTTCCATTTTTTTTTCTGTCCCCTGTTTCCGGCCGCAGGATCG
GCCTCTCGTCGCCGTCGATCTTGCTTTTGGGCGCCAGCGCCATTGGCGCGCCGGGGAGCA
TGGTGAACTCTAACTACTCGGCGCTCCCGCTCACCGCCACCGCCATCGAGCTGCAGTCCG
CCCACCCGCCGCCGCATCCTCCCAAATCTGGCGCCGCAGCCAATGGCGCGGCACACGCCA
AGCTCACCAAGCAGGACTCCTTCCTGGGTGAGGTCGAGGACGACGACGCCCACGCCACCG
CCGCCGAGCACGACGAGCTGCCGCTCATCGGCGACGACGGCCCGGCGGGTCCCCCCGAGG
GCTCGGGGGTCTCCGGCGCGGTGTTCAACCTCGCGACCTCCATCATCGGGGCGGGCATCA
TGGCGCTCCCGGCGACCATGAAGGTGCTCGGCGTCGCCGTGGGGCTCGTCTCCATCCTCG
TCATGGGGGTGCTCTCTGAGGTCACCATCGAGCTGCTCGTCCGGTTCTCGGTGCGCTGCC
GCGCGCTGTCCTACGGCGAGCTCGTGCACCGGGCGCTCGGCCGCCCGGCCAGCGTCGTCG
CGCAGTTCTGCATCATCGTCAACAACGCCGGGATCCTCGTCGTCTACCTCATCATCATCG
GCGACGTCATGTCCGGGTCGCTCAAGCACATGGGCGTCATGGACCAGCTCATCGGCCACG
GCGAGTGGGACAACCGGAGGCTGCTCATCCTGTTCGTTCTCGTGGTGTTTCTATCCCCGT
TGTGTGCCCTCGAGAAGATTGACTCGCTGAGCTTGTCGTCTGCTGCGTCTGTCGGGCTCG
CCGTTGTTTTTGTGGCGGTCTCGTGCATGATCGCGGTTGTGAAGCTCGTCGAGGGCAAGC
TCGCCGCGCCGAGGATGGGGCCGGATTTTAGCTCGAGGGCGGCGATCCTTGACCTTCTCG
TTGTGATACCCATCATGACCAATGCCTACATCTGCCATTTCAACGTGCAGCCCATCTACA
ATGAGCTCAAGGAGAAGACACCCCGCAACATGTACAACGTCGGCCGGATCTCCACCGTGC
TCTGCGTCGTCGTTTACGCGCTGACTGCCATCTCGGGGTACCTCCTGTTTGGCGACGACA
CCGAGTCCGACGTGCTCACCAACTTCGACAAGGACCTCGGGATCAAGTTCAGCACGGTGC
TCAACTACATTGTGAGGATCGGGTACATCATCCACCTGGTCCTCGTCTTCCCGGTCGTCC
ACTTCTCGCTGAGGCAGACGGTGGACTCGCTGGTCTTCGGCGAGCTCGCGCCCCACAGCA
GGAAGAGGATGCTCTCCCTGACAGTAGTTCTGCTGGCCCTTATCTACCTCGGCTCGACCA
TGATACCCAACATCTGGATGGCCTTCAAGTTCACCGGCGCAACGACGGGGCTGGCATTGG
GCTTCATGTTCCCAGCCCTCGTGGCGCTGCGGCTGGACAAGGAGGGGGAGTGCCTGGGGC
GCGGCGAGAGGCTCCTGTCGCTCGGAATGCTGGGGCTGGCCATCGTCGTGAGCGTCGTCG
GGGTCGTGGGAAACGTGTACAGCCTGAGGAGCAAGTCTGAGTGAGTGATGGATTGATCAT
CAGGATTACTATATTTCTAGGGCTTGTTATACAGAGACTGTATTACCACTGCCAGAATAC
ACTAGTTAGCAGGTACACCAGTTCCAGCTGAGCTGCTGAGCAAAGCTCATCATACTACAC
ATTTTGTTCACCTACAGGGTTGTTTCATATGTTGTTGGTGGGCATTCTTGTACTTTTGGA
CCATATTCTTTGATGTATTTTTCTTCTTCTATTTGTTCTTAGATATATATATATATATAC
ATGTGTATCCTGGGTCTTCTTTCTGATCGAGGCAATGAATCAACCCGGGTTTTGTACTGA
GGTTACTTCTTGTTTGCCTATGATATGACGAAAGCTGCATTCAGAAAATCTACCTTCTTA
ATGAATTTTGCATTCAGAAAACCTATCTCTGTGCATGATATGATGAATGTTGTTCAGAGA
ATGTATCTATGTCATTCTCATCTACTGGAGCTTGTCATTCCAACTCTGGGTATTCTTGCA
GTATTTTTTATGACTATCTATTCTCACTGAAACAATTTTACAGGCCTACTGGAGAAAAAG
TTTACTCTGATAAATATGTATTATGTGGTTCATTGATTTACACTTCATTTTTCCAAGTGG
GGGACTGGAACTAAAGTAGTGATCTAAAATGTCGTGATGAATGTTGAGTTCAGAGAATGT
AATCTTTGTCATTTCAATTCTGGATTTTTTTTTTAGAATAACAGGGATGGCTTCCCCGGC
TCGATTGCAAGAAAGAAGCCTGAATAGTCAGGTACAGTACACAAAACAGTTCCTCCAGCT
TAACAGTTTCAAAGTTAAAGCAGAAAAAGGAACAACTAGAAGATGATGACGGTCCTGGAA
CATAATCAAACTACCAAGGACGACTCAAGGCAGGTAGCATAAAGTGTGGACACTGGGCTA
TTCTTGCAGCATTCATCGCTTTTTTCTATATTCTCATCGAAAGAACTGTACACAGAAAAC
TGAGAGAATTTATGTGCGTGATTCATCGCTTTACATATCATTTTCCAACATCCATTAGTC
ATTCTACAAGTGGGCACTGGACGGGAAGCAAAGTTTTTACCTTAATAAGTTGGGGGGACG
AAAAATAAGAATAACCACATGTTACCTTAATCCTCGGCTTGAAATCCGCTTGCTTTTCAG
GAATTATCAAGCTCGAGAAGAATTTTATTGTGAACATGAATTGAAGGGATTTTAGAATTC
AAAACCCCCAAAGATGAACACAGAGGGCAGTCATTATAATAAAATGCTGAATAAGCATTC
TAGGGATATTTGCCCAAATCTCTAACATTCCCGAATGTTTCTTGCAGGACCATTCTGATA
CATCAGTATGTTACAAAAGAATACAGGAACAAAACTGCAAAACTGTTGCATGATCATCAG
CAGCACAATCTCTGTGGTTATCGCTATTAACCCCATATATATGCCTTGCAGCTTTCACCA
TGACGACGAACGGTAGGGTGCAGCAGAATGGTACAACAGCCACATGGACTCCAAGTATGC
ATTGATTTCAGAGATTTGGACCTGTGGACGACATGGAAATAGGATATTTAGTTGTTTATA
AGATCCAGAAGAAGCTGCAGGGAGAAAAATATCATTTTCTACAGCAATATAGTGTATCGG
TAAAGCTCATCTAGGTGACGACAATGTTGGCACATTGAGGTACAAAATATTTTCCAGCTC
CAACTAAGTATCGTAAAACACTAGTACACAAATTACCTGCAACTAAAACTGCGAGTTGCT
GAGGAATGTGACCATGCATCGTGCGCTCTGAAACATTTTGTCGATCTTCTGCCAAACCTT
GCTCTGGACATCAAGAAGTTTCCTCACTTTCTCCTGTAGCACTGAGTGACGCCGTATTGT
TTCACCGTGTATCTGCTTCCAAGGAAGATGAAATATGTTGTAAGCACCGACTCGATGGGT
TAAGATGGCGTACATGTTAGTGCGTACCTTGAGAAACAATTTCAGAACAGCTTGAACAAA
CTCAAAGTTGTTCCTGCAGGAAAGCTCATGAATGAAGTAGTCCAGCAGCAATGAGATGGA
CTGGAGCTCGGGTCTTGGTTCCTCCGACTCTTCCACATCATCGTCATCTATTATCTGTAG
CATCCGNNNNTCCATATCTAAAGATGACGGAGATAGTCCTTTTAGGTAGTCGGTGAACGC
TGAATCTGCAAAACAGAATCCAAGTCAGCACTTACCATGACGAAGATGGAACTTCTTACA
GTCTCATCAACAGACAATGAACCAAAATCTCTGTTTTTTATTTAGGTAGTTTGCTTGACC
AGAGATAGTTATAAATACTTACAGCTCTCAAGTTCTCCAGAGGATTGTAACAGCCGACTG
AAGTGGGAGGAGAGATCAGCCATCTTTTTGTGACCTGTGTCCTCAGTAGTGCTGCCATCT
GTTTCTTTACTGGAAGGAGGCTCAAACAATATCTCCCCAGAAAGGGATGGAACCGAGGGC
AAGAAAAATGGCGCCTGCTCAGGCTTCTTAGGTGGCTCGATCGGTTTGTTTCGAACCTAA
AGACACAGGAATGTGACGATGACTCACAAAACAAAAATATTCCTTAAATTTGTACTCTTT
TCAGTCACAAAAAAGTGTCCTTTAAAACATTTACAGTCACCAAGCAAAACTTTGACGATC
ACTTCATATTGTATTATATTTTTCAAACTTACAAATTTACAATATTACCAGCCAATTTTT
AATAGAAACTCGCTATCATGTTTCATGTTTGTATGGATGGTCTAAATGTTCGTCAAAATA
CTCAGCCAATATTAGAATAGATCTTCTACACACATTCTATTATATACACCACCTAATTCT
AACTCGAGGGACTAGCATAGTTAATGTGAGGTAACAGGATTCATTACTTTGCAGCAGAAA
TTTTGAGGGTTAAAACAGAGACAAAAGTACATTACCTTTATAATGTCAAGATTTGTCAAG
CTTTGCCATTGACTCCTTGGGAGTAGTGAGAGTGTGATCATATTTGGTATTTGATGATCC
ATTATGACAAAAGGTTTAATATTGGATTCATTTGAATCTTGTGATTTTTTAATGGGTTCT
TCCTCCTCAGATCTTTCGGCTGATGAAACAGTTGGCAAAAGCACATTCCGGACATGTTTA
CCACTTGCATAGCTGTCAACATTTGTCGAGGGCGAGAACAAAGCTTGATTAACCCTGTTA
TTAAGAGAAGTATGAGCTTTATATATAAGCTAAATCATAAACTGCAGAACACCAATAAAC
TACGTATGTTTGTTATTCATAATGGCAGAAGGTTATGAAGTAGAAACATAACAGGAGGTA
AAAACACTATCAATCTTGAGTTGCCTCTGCTTGCATTCAACTCTCTGCTTTTAAGGACAT
TCAATTTCATGGAAAGCAAAACTGTAAATCTGTATCCTTAAGTTGACCTTACTTATGAGG
TGTTCTGAGAAACTGTCCTCCGTGCATGACCAACATAAGGGCCACAGTGAACATGTCACA
AAAGTTACGTTTTTCAGAAGCTGTTCCATGTGGCAACCAGTCAGCAGTAACTCATAACTT
ATATACTATAAAACTACTTATATTGTCATAGTCTTGGCTCTAGCATAGTTTTATCAATGG
AGTAGAAATGAACATTTCCATAAAAAAAAGTGTTGTCCAGTGATGAACTCATCTTTCTTT
AGATTATACGGGTGGTTGGTTGGTTGCATGCGACGGTATGAAATTTTAGTTCATTATGTA
CATTGGTACAATGTGGACTGGAAGTGGTATTAATTTGCCTAAATGAGATGTGACATGATT
AGCGCAAATTACACCAGCTTGGAAACTCATCTTATGATATTTTCCTTAAATATGTACTCC
CCTCCGCTCCTACATATAAGTCTTTTTAGATATTCCACTAGGTACTACTCCCTCCATTCC
TAAATATTTGTCTTTTTAAAGATTCAACTATGGACTACATACGGAGCAAAATAAGTAAAC
TTACAATCTAAATTATGTATATATACATCTGCATGTAGTCCGTAGTGAAATCTCTAAAAA
GACAAATATTTAGGAACGGAGGGAGTACATACGAAGCAAANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNATACATCCATATGTAGTCCGTAGTAGGATCTCTAAAAAGACTAATATT
TAGGGACGGGGGAGTAGCTATCAAAGGTATGCAAATGCACAGGGTGAGCACAAGAAACAA
TGAAAGCCTACCAAAGATACACGCCATTTTGATCAACATGGGTGGTTGCCAGCACATCCA
TATTAGGAGACATAGAGACGGATGTTATAGATACATCAACGCGCATCGCATCTATCTGTC
TTGCTAAACTGATATCCCATATTCTGAGCGTCCCATCCATACTAGACGAAATGAGCCATT
TCCCATCCTCACTGAAACACAGATCAGTGATACGATCTGTATGTCCTTCAAATCTACGGA
CCATTTTCATAGATACTGTATCAAACAATACAAGCACCATATCATCTGCTACAGTAGCAA
GAAGACCTGCCATATAAATAGCAACAAAAACTGTTAATTATCCATGGCATACTACAAGGG
AATAACAAAAAAATGTTGAATATTACCATTTGCCCGGTGATATGCAATCTTAGTTACAGA
TTTACCAACATTGAATTTGGATTTTAGCTTGCAACTTTTAAAATCCCACACCTGCAGGAG
ACAAGCCAATAGCTGAGTAATGGAATCATGGTTTAAATAAATTGTAGCTGAAGTGCAACA
CCATCATCTAACCTTAATATCCCCACGGTATCCAGCACTAATCAGAGAGCCATTTGTAGC
ATCACACGCTAATCCAACAACTTCCCCTTCATGTGCACATTGCAATGACAGCGAGCTATC
AATGTAACTACCACGACTAATCCCAGATTGAAGGTTAAATTTTTCGATCCAACCTCCTTC
GGTGCCCAAGATAGTAAAATTACCACATGCACTTATAGTACAAGCCTGCCAGAAAATAAA
AGTAATTTCTTAAAGTAGGGAAATACTTCTATCATTTAACAGCTGTCTTGGTAGTACCAA
GAAAGCTTGTTCTGATCCAGCCCTTATAGTATATTCAGATTACAAAAACAAGCATTACCT
TAATCGGTGACTCAGTCTCTGACGATGGTGTAAGAATATGTTCACCTATAACAAAGTTCT
GAAGACGCCATACATATGCCTTTGAAGTATCCATGTGGCATGTAACAACATTACACCAAT
CACGTGCACGTATCTCAGCTGAACAACAGTTGATTCCATTGGTGAATAAGCAATTTTATC
TAAAAAAGATAACAGTGTGGTTTCTGTTCAACACTAGTACAGGTGCACAGAATACTGGTA
CAGTGGTTTATTATGTGTTAACATGTATGCCCTTTGCACCAAATATAAATAGTACAGATT
GAAGGTTATCATGGTTTCTAACTTCTAGGAAATTACACAGATAGAAAAACAGAAGAACAT
GATATGAACTATAGTATTGTCAGGACCGAAGAATTACCACAATCAAATGCAATAACTGGT
TTTAGCTTTATCTCTTCCGCCTGTAGAGAAGAAGAACATGTCAAAATCCCAATAAGGAAA
CGATGAAACGGAAGGCGATAAAGGAATAGTAATAAAAATTCACCTTTACTCTAAGCTTTT
TTGCTCTTTTTGCCACATGCCGCTGAGAAAGCTCTCTGCTTTGTTGATCCTGTCAAAAAG
TGTTACTTCAATAGGATTGAAAAACAGCAAACATAAACTCATTTTGCTTGAAACGGAAAA
AACAACCTGAGAAGACAAACATGCAGGAATTCAGGGTAAAGATGAGTGTGCGGCATGAAG
TGAACACGATTACTACAATAGCATTTTGAGAGGACAAAAAAATGCAGGAAATGACGACAG
GTGCCCCAGTGTGCGGCTGTAAAAATTACTGTTACCAAGGTTATAAATTACCTGAACAAC
TGAGAAAAGACGGAAGGCACGGTCTTGACCAGCAGATAAGATGAATTTTCCGTTGCCATA
AAATCTAGCAACAATAGGCTGACTCAATAAAACAGAACTGAAACAAAAGTATAGGCACAA
CAAACTTAGAGCTCATTTGTTACCTTATGCACCGAGGTGGAGCGCTATGTCCACTTCGAA
ATCGTAACAGACGAGCATCTCCTTCATTATTATCAAATATCCACATCTGGATACAGTATA
TTAGATTACTAAGTTTCAAATGTAAACTGAAACTAAGGTGTTGCAGCTAACTTAATCTGA
TTGTCAAAGCAAATATATCTCACACCAGTATTGACTTTGTTTTTCTTGGCTGATTTTGTT
ACTTATTAACCTGCCACAAAGCTCGATTCAGTAGGAGGAACCTTATATGCTCCCGCCAAA
TAAGGCAATGTGGTATAAATAGAAAAAAGGGGGATGGTGTTCTATGTAACAGGCTAAGCA
TTAGGTCAGGCAACATGCAGCAGCTTTTGAACTTCATATGTTACAGCTCAACAGCTAATA
AGATACAAAGGTTTCACTAGCAATAATGTGAAAAAAGAAGACAAGAAAACAGCACTTACT
TTTATTGAATTATCAGCTGCTGAGCTCATCAAAATAGGTTCATTGGCAAAGAAATGAAGT
GATACAATAGAACCATCATGGGCCTCCCTAATCACAGAGTGCAGCCTTCTCTTCTCAAGA
TTCCAAATGCTAATAACACCCGAGGAACCTCCAGATGCTAGAAGGGGTTGCCCATCTGGC
AGACAAAGCAAATTTGAGAAAATAACACTTAAGCTTGACATGTAGAAGCGTGAAAATGCA
AATTATTAAAATAAAACAATGCACCTCCTTGTTACAAACAGGGAGAGCCAAAGCTATATA
TAACCATGAAAAACAACCTGGTGGCAGTAAAGTATCCACCGACTGGTCATAAAATTTAGC
CCCGTATACGTATTTCCACAATAAACTACACAGGCTCTAGAATTTAATTCAAGCATACCA
AATATCATCGTTATTTAGTTTGAACTAGGACGCAAGTCAGTAAAGGTTTTATAGAGAAGT
CAAATCTCCAAAAAAATATAAAGAAAATTCATAAAGCCAAAAAGAATGTGTCAGCCACAT
TTTCTGAACTGGATCTCCGAATCAACGAATTTGCATCATAAATACGATATAATCATAATC
ACAAACCGAAGTTGAGGACTTGAATAAACCAGGATTTGTGTGTGAATTTCATTACTGTAA
CAGGATGAGCAAATATGAATTATAAAAGGTTATACTGTATATCATGTCAGATAAAATCAC
CTGTTCGAAATGACAGGGCAGTTACAGCACCCCGGATTTCATGGTTGAAAGACATCAACT
CTTCATCATATCGTATATTGTGAACATGAATTGATCCATCGGAGCAACCGACTGCAACCA
TATCCAGAGCAGGTGAAGAAACACAACAACGTACTGATGAATTCCAACCCTTAAAATCAT
AAATTTTTTTCTTTGTGCTGATATTCCACAGCTGCAAGGGTCCCTCTTCACTACCAATAA
TGACCTGATGTATCAATGATGATCAGACTTGTCAACACGCACAAAATTCGGAAAGCAAAC
TATCTCCAAAGAAATCAATAATTGCAGGCACCTTATTTAGGTAAGTATCCGGATGCACAA
TGCAGGTTGGAGTAAACTTGTCTCCAAGTGATATGTTTCCAACAGGCTCACTGCTTGGTT
TAGCTCCTCTGAAGGCCCAGATAAATATATTACCTTTAATATCTGCACTGAGAATGTATT
CTCCAAACAGGTACAACATGTTGACCTTCTCTTCATGTTTAGTAAAGGTAACCACCTGAT
TTTTGAAGAGAAAACGTAAAAACAAAGCCTCAAAACTTCAATAATAATCAAAATTGAAAA
AAGCGCTAGGCCTTAATTATGTGTTCGACCACCTACTTGCGCTTTTCTAGCTTAGGCCTG
ATTAGGCGAAATTGGGCGCAATTAGGCGTTAGTACTGTAGGATGAAGAAATAAGCTAGAT
GAGCCGGCCTAGCCCATTAAACCACAGGCCCATCTTCATATCCTCCTACTAAAGCTCTTG
TATGTGGTGCAGTCGACAGGAAATTTAGGTTTCCTCCTCACGCCGCCTCTTCCCCTCGTC
CTCTCTCCCTTGCTACACGAGGCTGCTTCTC
