Contig Data
morexGenes
Links



Map Locations of contig_136489 (5094 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_136489

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_5639 2 1372 bp AK357530 Available Available None





CDS Structure of MLOC_5639






Contig Sequence (5094 bp)

>contig_136489 5094 assembly3_WGSMorex_rbca.fasta
ATCTGATAGTACAACGGATAGTAAGGAGAATTCTAGTTCAGGAAGTGATGCTGATAATTC
TAGCACTACCAATGATGAGAGCAATGTGCAAGATACTATTACAGAGAAGGTGCTGAAGAA
AAGAACCTTCAGGGTTCCATTGAAGGTAAACCATACTTGGTAAATTTACGCCAATATTGA
CATGACAAAGAACATATGACATAGATTAATTTACACGTCTTATTTTTTAATATAGGTCAC
TGAAAAAACAGCTGGTGCTGCATCAATCCTTTCAAAGGAGCTGTATTCTGAGGCAAAAAG
TAGGTTAGATGTACTTAATAAGAAGGATGCTGAACGGAGGAGAACTGCTGAACTGAAAAA
TAACCTAGAGTCTTACATATACTCTATGAAGGAAAAGGTACCCTTTTTTTGCATCTGTCT
GTCTTAAATTAAATGTGCACCTTTTTTTGTTTTCTTTTTGAGTTTTTAGCTTGTTGTGAT
GTGAGCATTGTCAGCACGTGGCATACTGCAATGTAAATTGCTTTGTATGTGATGCACCTT
ATTTATTTTTGACTGCTTAATTGCTGCCATTCAATATCACAGTTGGAGGAAAGCACAGAT
ATGTTGACCGTCTCAACTGAACAGGAGAGGGAATCTTTTACAGAAAAACTCAGTGAGGTT
AGTCAAATAATGGATCTTGCTTGGGGTATAATTTGTCTAGGATATGTCTCATGCTGAAGT
TGTTGTTGACAAATGCAGGTGCAGGATTGGCTGTATATGGATGGTGAAGAGGCTCAAGCA
AACGAATTTCAAGAGCGCCTTGATCAGCTTAAGGCCATGGGCGACCCAATTCTTTTCAGG
TAATTAATTTTATTAAATTTTGTACATATCACTCAGTTACTGAGATTGTTTATTTTTATT
TTGTTATACAGAATGAGTGAGTTAAAAGCCCGACCAGCAGCTTGCGGAAGTGCTCGATTA
TATCTTACTGAGCTACAAAAGGTATCCCCGCAGATGAGCAAATGACTTCTCTAACTAAAA
TAATTTATTCTTGACACAATGTACTCCAATATAAGATCCAATATTGTTTACGTGTTTGCA
ACTAAAATTATGCTTGATTAAGAAAGAACATATACTTGTTCCATTTGAGCAAAAAAAAAA
AACATTTGTCTGGAAAGGTCAAGCGTTGTATTACCAACACAACGTCAGTGCAATCTTGGA
TCCTTTCAGCACATGTCACTGCCAGAAAACAAAATTTCTTCATCTTGAACAATCACGCAG
AGTCATCTTCGTGTTCATGGGTTCTTTAAGCTGTCACTGTGCTAATTAAATATTCAAAAG
AGATAATGTCAGTGCAATCTTGGACCCTTTCTTATCTTACATTGCAAATTTGCAAAGTAG
AACCCATGATAATGATCAGACTTTTGTAGGCGCAAAAAAACTGAAATTTGGACATTGAAT
TCCAAACAGGCTAAACACACACTGCATTTTAGTTTATCTGCATTATAGAACCGCCAAGCC
TTAAAAATTGCAGATGGTTCTACTAAACGGTTTATGTGTTGTTGCACTCTCGTTTATTCT
TTTTTCCTGCAGATCGTTAAGAACTGGGAGACAAGCAAACCATGGCTTCCAAAAAAGAGA
GTAGATGAGGTCGTAAGTGAAGCAGATAAACTGAAAGCTTGGTTGGAGGAGAAGGAAGCC
CTACAGAAGAGGTATGCCATTTTAAAGAAAAATCATTCTCGAGTTCTATTTACGTTTCAA
GTGCCTAACTCCAAACGGGTATTGCAGCACCCCTGTCCACAGCTTGCCTGCTTTCACATC
TGAAGAGGTCTATAAGAAAGTTTTAGCCCTACAAGATAAGGTCAGAATTTGTACTTAGCC
TCCTAGCACACCAGGCTCGACTTCTATTCAACTTCTCAACAGTCGACACAATGGGAACTT
GCTTGTTGTGCAGGTCTCTAGTGTCAATAGGATTCCAAAGCCAAAACCCAAGGTTGAGAA
GAAACCTCCAAAGGAAGACGCTAACAAGGACAAGACGGACTCTTCAGAATCTGCATCCAG
CGAGCCTGAGCCTGAGTCCACCGAGAAGTCGTCGGAATCAGATGCCCCGGAAAAGACTAA
CGATTCAGAACCAGAATCTCATGATGAGTTGTGATTATTAGGATCAGCTTTTGATCCCCC
TGGGAGAGATACTGCTCAATATACTCCGAGAAGATAGTTTGTACCACAGTTTTGTTTGAC
GGCCGAAAGACGAGGTTTGTGTAGGAATTCGCGGCAGGCTAGATGCTATATGGGCGAGAA
GAATTTGATATAAATCCCTGTATAGCAGTATTGTGGTCTCTAGGGCATATGCTGTCAAGA
TAGCGCCTTGAAAGGCTTAGTTGTCAGGACTGAGAAGACTTTGTAGCTGCATTGTTGTAC
TGAAACTCATTTATATTTTGATAACAGCTACTATAGAGATTTCATGTCTGGTAGGGGTAT
CAATGTACCTTTTAGCTCTTTCATACTGTCTATCACGCATTGTTGTGAACTTTCAGTTAA
AGGAATAAGAGTGCATCCGCCTTCAGGCATGAAAAAAGCGGTAGGCGTAAGTTAGGCGGT
GGCAAGACAGTAATATAGCTTTTGTTGTCAGGGTGTATCTGTGGTTATTATACGTGTATC
GATGTTAATATAGGAGTTGGATTATGAAACATTTCCCGTATCAGTTCAATATGACATAAT
TTTTTAGTTGGGTAGACAATTTTTTATTTACCTTACCTAAACGTTCATTTATCTTAAGCA
GTACCTAAGGACACTTTCATTTATCATTTATACTCGGATGTTTCCAATGAGATCTTTCAA
ACTAGGCCCTATACGTGCATATTCTCACAAATATTTTTTTCAAAACCAACTTTGAGTCGG
GAAAAGCAAGTTCGTAGTGCAAATATGCTTTTTTAGCTTGGACCGATTTTCTACTACAGT
GATAAGTCAATTGTGTGAAAACCATGTTTTGGGAAAAAACATAATACTTCATCCGTCCTA
AAATAAATATTGTTGATTTATTAACAAATATATACTAACTTAATTATAATTTTATGACAC
CTATTTTGGAACGAAGGGAGTAGTTGCTTGCATATTATTAAGATGCTTTTGTATAGTTTT
AGGGTACGCACTAGTTTACGCAAAGTAACGTAACACGATATATAAAATAAAAGTTGCATT
GCGAGTTATTTCTTGTCACATTAACTTGCATACAATAATATTTGGCAAACTATTTAATTT
GTATTAAGAAATATTGTAGCACATATCATTTGTGACAAACGATATACGTGCTGGTTTACG
AGAGAAAAGCAGATTTATACTGAACATTTGATTTTCGTCAAAGTATGTTTTCAGATATAT
CCACCAGGACGTGTTCATGTGGAATCTAATTTTGATGGTCTCATGACGAGAAATATAAGA
AAATGCAAGAAAAATATGAAGGAACTAGTTTTACTCGAAATAAATATCAGTTTTTTGGCT
GGCATGTGTTAGAAAAGCAAGTTCGTACTAGAAACTTGCTTTTCGTGGCAGAAAATGACT
TGTCAGAAAAGTTTATCAGAACAAGCCGATGTGGGATCTAATTTTAAAGCACAACGGTGA
AAGTGAAATTCAATCTATCCAATTCCCTTGAAAGTAATAGAATTATGAAATTTTAGAATA
ATTTGCATGATGGTGAATGTCATATTTCCCCCCCGAAGCAGGCCTCAAACATCCGGACGC
ACCCATATCCTTCACATATTCTAGCAACCTCCACGCTACCGAGCAAGTCACAAAATTACT
TTGCGAAGAGAGCATGTGAATTTGAAGTAGAGTGGCCATGTCACTTACACGAAGTATCGT
TGCCGGGGAGAAAGACAGTCGAGGAAGATAAGCGGGGGCCAGGAGGCAGGAGCAGCGCTT
GACCAACTCCGCCCTTCTCCAAAAGTTGACCGTTATCTCACTGACTCCCTATCCCTAGGA
CCAGTCAAACAGCCAGGCTTGCTACCGCCAGCCAGCCAGCCACAGCCACTAGCACCCACC
AACCAACCTCGTCTCAACTCTCAACTCCCACTACCACATGCCCTGACGCCCCGACCCGGT
CCATCTTGCACCCAGCCCCAGCATGTCACTCTCTCCTCATCACCATCGCTCGTGCCTCGC
AGCCCGAGAACACTTCCCCCCTCCAGAATCCCAGCGCCGCCTCGTATATAAAGCTCCCCC
AACTACTATCAAGCCAGCCGCGCCGCACAAGGAGATCGAGAAGAAAGCCGACCAAAGGCG
TGCTCCATCGATCGAGCAAGCGAGGATGGAGAAGAATAATGGCGTCAAGGTTACCTACGT
CGAGACGCAGTTCGTCACCTCCGACGCCGCCGGCTTCAAGTCCCTCGTGCAGCGCCTCAC
CGGCAAGTCGCCCGCGCGCAAGCTCCACAGGCCGCGGCCGCGCCGCGCCGACGGGAGGAG
CGCTGCCGCCGGACCGTCGGGCTGTTTCATGCCCGCCACGGCAGGCCCGGCCAGGGCCAG
CGCGGCGGCGAATGACGACGTGCGGACGGCCGACGCCGGCGCCGCGCAGCCGTGCCTGGA
CGAGCTGCACGGGCTCTGCGATTACTCGGAGCTGTTCGGCGTCGTCGGCGCGGCCGGACG
GCACCATGGCGGGAGTAGCACTGGTTTCCCCTATTGAAAAAAAGTGTGAACAATGCTCCA
AATTCAAGTCATATTTGGACGCTCTCTGCACTTTTATGTTCTGCCTATTGCGGTTACTAA
GGCATCCAAATTTTGAGCTGAGATGACCGTTGTCAATCAAATTTTTTTCTTTTTGAAAAG
GAGGAAACGAGCCCCCGGCCCCTGCATCAATCGATACATTCAGTCATATTATTTAAAAAT
TCAAAGTAACATCATAGGTCCAGATAAGTTTGTATGTCGAAATAAAAATGAAACTAAAAT
AAATCTTAAAAATCTGCCACACCCGGCGTAACTAATAACAGACTACGATGCCTATACACC
TAGTCTATTACTAGCACGCCATCCAAACCGGTTGAAGNNNNCCCGTGCGGCCATCTCCCA
TCGGTTGCACCCAGTATCCATAAGCTCTCTGGAGTCCACATGACTGAGTAACGA