Contig Data
morexGenes
Links



Map Locations of contig_136404 (3433 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_136404

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_5582 1 3291 bp AK362549 Available Available None





CDS Structure of MLOC_5582






Contig Sequence (3433 bp)

>contig_136404 3433 assembly3_WGSMorex_rbca.fasta
ATACGTTTGAGACGTATCATGGGGCGATTCCGTTCCTGCTCTCTCAGCCCCGGCCCCTAC
ATCGACCCCGCCCCTCCGCCAGCAACTCCCTACAACGCCGCCGCTAGAGGGCCGGTCATG
GGTTCGTGCCGGGCGCGAGGATGACTGTGGTGGAGAGGATCCTCGCGCTGGAGTCCCTCC
TTTGCCATGGCCCCAGATCGGATCTGGTGCGCCGCGGCCATTCCCCCATCACACATATGC
TATCGTGCAAGGCGGCCCTCATCTTCGGTGGTGCCCATCTCCCTCGATCTGTGGTGGTGG
CTTCGACGTGGGGGTCGTCCAGGCAATGGTGGTCTTGACACAACTCCGGTAATGTTGTCT
GGACTGTTAGGGTTGCAGCGATGATCTCGATGGTGGAAGCGATTTAGATCCGATTGGCCG
GATGATGGCGTTTATAGATTGTTGTGCAGCGTCTGCCTACGGATCCACGACGGTGTGGGT
AATGAAAATACTTTAGGAGGCTCTATATCTTGATCCGGTGGATGACTTTAGTTGTGAGTT
ACAAATTATGGACGATGACCTGACGCTGAGGGATGTTTGTGGAGTAGCGGTGGTCCAATT
GTAGCTGCTGGGATAGCGGAAAAGCAATGGAAACAACACATGTGAAATTTGGATGGTGGT
GCTGCATGCATCGAGTCTCGAGCTTTGGGGCGAAAGCCTAGGACAGACCCAACTGGTTAT
TCCTGGCAATGGATATGTTTTTTACGTTGTTACCTTGTTGGAGGCATTGCTCGAATATGT
TCGGATTAATTCCTCAGGGTGAAAACTTTGATTTCTGGCCTTTATGGTTGGATCCGGTGA
TGGCGTTATTTGAGTGTCGCTTCCTTTCTGAGGGTGTTGTTGTTGAAGATCCTCGTCATT
CATGTGGTGTCAATGGTTGTTGCGGATATGGTCTCGGTTGTAGTTTGTCGATCGTTCATG
TGATCGCTTTGGGGCTTATTTCTTGTTTCTTTTTCTTTTTTTCCGCACTTGGATATAGGT
TTTAGTCTTATCACTTTTCTAGTTGCCAGTGTGTACTGTGTGCATTTTAGTTATGCAGAG
ATCGAGTGTGCGTTAACTGTGATGTATCCATTTGAGCCAATAAAATCTATCATTTGTTGA
TTTTTTTTATGAAATCTTTAAAAAGATTTATATTCAGAAACGGAGTGAGTGTTTTTTAAC
GCGAGAGAGCAGGCAATGCGTTTCTTTTTCTATGCAATCTGGTGGGCCTGGATGACGCAG
CACTGATGATGATGATGCCCACGTTTTATTGGCTAAACACCTCGATAAAATATCTGATCA
ACTTGCCCAGCTGGTTTATTTCTCCTTCTCTCAAGTGATAATTGATTGATAGAGACCAGG
CTTCAATTCCATGCTAAAGTATTGTGATTGGTTTTTTTCGCAGGAAACAAGTCCTCTTTG
TTGATAGAGATTAGGGATAACTCTAACCAAGTAAGATAGTACATTGGACAACAAAGAGTT
CCTTACTAAATCAAGAGAAGACATCCAATCCAATGCAAATCACTAGCACAATGTCTGGCA
TGAGCCTCGGAGCTGGCAGCCCAAAATCTTTTAGAACTATTGTCAAATGTGTTGTTGCAT
CTTTCAAGAAGCAAGATCAAATTGCTACAAAGATTAATACTATCTTGTTACGAAATCAAT
TAAGCTAGAAATGAATAACCCCTAGATTATGTACGTTGAAGAACAATGAAGGCAACACCC
CAAATCTGTAACAAAAATCTCTTGCAAGAACGCAAGTATGATCTCGCAGCGAGTAGATCA
GTTACCATCCTCACCCGGTGGCGTCCGGCTGCGCCCGGTGCGATGACCGCGGGAACGGCC
GCCGGAGTTGGGGCGACGGCGAGAACTCCACGGGCGCCGGCGGCAGCTCCATCTCGCCGG
CGAGGATCTTGACAATGTCCGTGCTGTCCGGGCGGTGCTCCGGCTGCCGCTGCAGGCACA
TGAGCGCGAGCTGCACGCAGAGCGTGGCCTGGTCCTTGTCGTAGGCGCCCTCCAGCCGCT
CGTCGATGAGGTCGAGCACGTTGCCGGCGCGCGCGAGCTGCCGGCACCAGCTCACCAGGT
TGGCCTTCTCCAGCTTCATCGGCGACGAGAGGATGTGGAGCGGCCGCCGGCCGGAGAGGA
TGACGAGCACCAGCACGCCGAAGCTGTACACGTCGGCTTTCTCGAGCAGGTCGCCGCCGC
CGCCCTCCGGCGCCACGTAGCACACCGTGCCGCGCATGCTCGTCGTCGTGCTCAGGTCCC
GGCTGAACAGGTCGCCGCTGTGGTGCATGTCGCCGCTGCCCGCGGACTGGCCCCGCCGCC
GGCTCCTCTTCCGGCTCCTACGGAAGCTCATGTCGTCCAGAGCGTTCCGTTCGGCCTTGC
CGTCCCCGTTGACATTGCTGGTGTTCACGCTGCTCGACCGCAGCCACGGCTTGCGAACCC
TGCCCCGGCGCTGCTTGTCGACGGTGCCGCCGCCGGCTTTCTTGCTCATCTCCTCGAAGA
ATTCTTCCTTCCACCACTCGCGCATCTGGGTCGCCTCCTTCTTGTCGCCGGCGGCTCCTT
TGCTGGCGCTGCTGTCGGCATTACCCGCGTTCTTATTGTCGTCGTCGGCGACGGAGGGTG
AGTTCTTGTGGTCGCTGTCGTCGGCCCAATCCGGATTCCTCTCCGGGCAGATTTGGCTGC
CGATCCACTCGGCCACGTAGTCCCGTGGGTCGAGCTCGCCGCTGTCGTCCTGCTTCACCT
TCATCCACCACTCATTTCCCGACGCTCTAGCCGGAGCGGGCACCGGGTCGTCTTTGGCGG
AGGCGGTGGTGGAGAGGTCGAGGTCGCATGCCTCGCCGAGTTCTTGGCTCATGAAGTCGT
CCCCGCCGGCGACGGGTCCAGTGTCGACGACGGCATCGGGGGTCTTGAAGCGCGCGAGGC
CGAAGTCGGCGACCTTGGCACGGAAGTCGGCATCGAGGAGCACATTGCTGGGCTTGAGAT
CCCCGTGCACGACCGGCGGCTGGCACTCGGCGTGGAGGAACGCGAGCGCGCGCGCCACGT
CGCGGACGACGCCTCGCCGCTGCGCCCAGTCGAGGCATCGCCCGTCCCCGAAGAGCGCGG
CCTGGAGGGACCCCTGCGGCAGGTACTCGAAGACGAGGAGCAGGGACTCCCCGTCGGCGC
CGGAGCCGGCGTAGCCGAGGAGGGAGACGAGGCGGTCGGAGGCGGGCGGGAGCGAGGCGA
GCACGTGGAGCTCGGCGGCGAGGAGCAGGTCTTGACGGCGGCGAGGGAGGCGTCGGGGAA
GGTGGCGAGGTAGACGGGCGAGGCGGCGCCGCGGCCGAGGAGGCGGGGGGGGCGGGAGCC
CCCCCGCGCGCGGGGGCGGCCGCGGGCGGGGCGGCGGGGGCGCGCGGGGTGGGGGGGGCG
GGTGGGGGGGGGG