Contig Data
morexGenes
Links



Map Locations of contig_136396 (3506 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_136396

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_5574 1 559 bp AK366756 Available Available None





CDS Structure of MLOC_5574






Contig Sequence (3506 bp)

>contig_136396 3506 assembly3_WGSMorex_rbca.fasta
TGGAGGATAGAAAAAAGTAGGGTACTGCAAAAAGAATAGTCAAAGAGAGGGAGAGAGGGC
GGGGGGGGGGGGGGGGGGGGGGGCCCTCCCGCCATATTATCAATGCAGAGTGAGCGGTCG
TCGCGGGCACCACACCACGCGGTACTCACACGCCCATGCGACATTGGCCTAGCACAACGA
GCACAAGCAGAGACGGCGAGACAAATGCACACCTTTTTTTATTCCAGCCAATTTACTTGC
AATTAAAAAATCAGGAATACAAAAGATTGGTTTAACTTTTAAAATCTTCATGAATTTTAA
GAAAATCACGAAATTCAAAACCATTGATGAATAATACAAATTCCAAATATGTTCATGAAT
TTGAAAAAAGGTTCATAAATGAAAAAAATCTACAAAAATTAGAAAATTGTTTATTTTAAG
AACTTTACGAATTAATAGATGCTTTTGGAAATGTTCCTGAAATTTAAAATTATATTTTGT
AATGTAAAACATGTTCATGTGTTTGAAAGAATGTTAGCAAATTTAAAAACCATTCACGAA
ACTCAAAATATGTCATGAGATCCAAGAATTATTCACCAATTGAAATAATATTGACGAATT
CAAAACCATCGCGAAACTAAAAAGATTGACGAATGCAAAAAATGAGAATACAAAAGATAT
TCTCCAAATTCAAACAATCTTTATGAAACTAACAATGGAAAAAATAAAACAAAAATCTGC
AAAAGAATTAAGAAAACTGAATGAGAACCTCGTGGAACCTTCCTAAAACCACTCCAAGGG
AAAACACTTGAAGATAGTTGATGGGCCAGGCCACAAACGAGCGTGCCTGAGAAGCACATT
AGGACATGTATAATGGTTGGTAAGACAATTTTACCTTAAGATTTGCATGTAATTTAGAAA
TGACAATGAAAACATGTCTATGATGGGTTATTTCTTAGGATCCTCTACAATAACTAGATA
TTCCTAAAAACGTGGTAAGACATATTGTGCTAAGAGATGATCTCTTAAATAAGAGAAGGC
AAGTTTGTTCTTACAAATTTTCTCTCTTCTTCACCTCAGCATTTATCCTACATGGTATTT
CTAAAATAACATCATTGTACATGCCCTTACTAACAACGGGCAACACATATCATTTCTGAC
ACGGAGTAACAATGACTGTCCCTCTGAAAAGATCACATCATTCGAAATGCCCATGATAAA
ACGCCGAATAGGCTAGGGCAGCAGCAAGGTGTGCTTACCTCACCAATAATAAAAAAAACG
CACACAACATACACACAAAACGGGTGGAAAATTCACAAATACCTATTTGACGCATTGCAT
GACAAACAATCGGTGCTTCACAAAGGCGAACGACAGAGTGAGCGAGAAATGGGCTGACCA
ATTCAGCAGCCAGGTGCTATAAAAAATCTTGCTTTGAGAAACATTCGAGAGGGTCCCTGT
CTGGGTTTTACATGTTTAGGAACCTTCTAGAAGGTTATGTTTCAATTTTATAATTTCACT
TTTTCCATTTTTTATTAAAAAGATCATAATTTTCAAGAAAAAAATGGATTTCCTTTCCAC
AAAATGCTCCTTTTTAATAAGAAATTTGATATTTCTTTAAAATATTTATTTTTCTAAAGA
GCTGTCTTGTTTTAAAAAACAGAGTATTTTTTAGCGAAATTTCAATTTATAAAATTGTTT
ATGTTTCAAAAAAATATTTCTGTTTCTGAAATAACTATTTTGGGCTTTTTAAAAAATGCT
AGAGTTTTAATTAGTGTTCACTTTTTTCAGGAAGTGTTCTCATTAAAAGAATAGATATTC
ACTAAAGTGAACTGGCTCGCTACGGTGCACATGTTGGTCGCAAGTACTCCCAGTATTGGG
GAGCTCTGACTTGTACTGCGCATATTGTCAGGAGAGTGCACAGCGGCCGCCCGAATAGTA
CAGCCCACTGGCGCTCGAGCGAAGCGAGCTTGCGTATGAATCGACCAAGCACCGGAGGGA
ATTAGGGAATTTGCTACAACAGTGAAAATTGTTCGTAATTTGAACTCACGACAAGAGAAA
ACCCGAATGAACAAAAAAAAATGCACATAACTCCGAAGTTATGACTATAGTTGCATATGG
AGTGAGCTACTTATCACCACAAGAGAAGGTCGAAGTGACTTCTACAAGGGGTACGCTTGA
ACACTTAACGTGTGATTAAAAAAACAACCAAGAAGGCAAGAAGGCTTAAATGGTGACTGA
GAAAGGCTTAAATGGACCCAAGAAGGCCTAATGGGCTCCAAATGCTTCACGCCTTGCACA
GGAAACCCGCGACGAGAAGCCTCTGGACACGGAGACGCACCGGAATCCGAAGGAAGCGCA
CGTACCACGCTCGCCGAGATAAGCTTCCTGCCGCCTCCACCTTTCCACCCACAGCTCGCC
GCCGCCTGACACCGGAGACCACCCTCGAAGACCTACTCATGGCTGTCCTGCTCCGCACCA
CCAGCTGCGCCGCCGCCACGACCGCCGGCTCCTCCTCGACCCTCCTCGCCACAACCTTCC
GCCGCGACCGCCGCCTCCTCCCGTCCCGCGCTTCGCCGGCGCGCCGTGCCTTCACTACCC
GCGCCTCGGCCGAACCGCTGGAGGTTTGCGCCAAGGCCTCCATCACCGTCCCCGACCGCC
TCGGCGATTGTGAGCTCTCTCTCTATATATCTGAGCCCCCGCTTGCTCGATTTGTTTCTG
TCATATGCATTGGAAATGCAAGGGACTGGGCGTATTAGTAATGTATAGGATTGTTTATGG
CATATCCGTTATTTTTGCTCTGCCTTTGGTCTGGGCAGAAGTATACTTAGCTGTGCAAAA
GAAGTGGGGAAAACTGCAGGTAAGAGCATCAGATATTTGATGGTTTGAAGCTTAGTGGCA
CATGGAGCAAAGGAGATATCAGAGTCAGCGAAGTGGTTTTAGTTTTTACAGCGCATAGTT
GGGGCTGAACCAGATTTGACAAACGGCATTCGGGTTTGTGTGATTCTTTGAGTTATCATC
TCTGTGTTCTGGGTGTCAAATACTTGTCCATAAGATATATATGTAAACATAATTGGTTAC
CCCAATGCACTATAGAAGATTGACTCGTCTTTTCTTGGTAATTCTTCATCTTCACGAGTT
GTCTTGAATTTTTTGAGAATGTTGATGATGACTCTGGTACTATATTGCTAGTTTGACAGA
CTAAGAATTCCATTTAGTCCACCATTTCAGTTTTTCCTCAGTTTAAGAGTCTATTATGCA
GAGTAATCTTAGCATTTTTTTTCAAATAATTTGTCTATGTCATTTAAGATGACCGGGCTT
CATAATGGACTAGAGACCAATCAAACTCTGTTTACATCAATACGTAAATGCGCCGAGAAC
CGAAGATTGTGTGGGTTGTAAGAGATGTGAATCTGCCTGCCCGACAGATTTTTTAAGTGT
CCGCGTTTATTTAGGGCCTGAAACAACCCGTAGCATGGCTCTATCTTATTGATACGTTAC
AAAAACAAAAAACTTCATTTGAATCG