Contig Data
morexGenes
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Map Locations of contig_136274 (6890 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_136274

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_5438 2 4727 bp MLOC_5438.1 Available Available LOC_Os08g45030.1, FRAME:+1, EVALUE:0.0, 13108.m04908 protein multidrug resistance protein, putative, expressed





CDS Structure of MLOC_5438






Contig Sequence (6890 bp)

>contig_136274 6890 assembly3_WGSMorex_rbca.fasta
TCTTATTGTGCAAACTAGATACAACCCATTGGAGTAGTTGTATGTTAAGGTGTTGGTTGA
TGACATGACATATTTTACCAACAACCTAACCAACAAACTGTTGAAGATGCCCTTAGAGTA
CACACGATTATGGACGTAGGCAAATTACTACTCCTAATACTACAGAGGTGGGATTTGATA
CTACTCCGATGTGTCATTCTTTTGCTAAAGAAACATACTACAGAGGTGGGAGTAATGGAT
AGAATGTGAGCGTATGTAGTACTCCCTCCGTTCCTGAATATAAGTAGTTTTAGAGATTTC
ATTAGAAGACTACGTACGGATGTATATAAACATATTTTAGACTGTAGATTCTGTAGTTCA
TTAGTACAATCTCTAAAAAGACCGATGTTTAAGAACGGAGGGAGGAACGGAGGGAGTATG
TAATAGTATGTGTTTGTGGGTATATGTATATCTACTATACTGTGTTAAAAAGGACATATA
AATAGGATTGGGGTGAGACGTAGAGAGGGGAATAATGCATACTCCTACCAAATACGGTGG
GCCCTTGTCCCCATTATAGATTCCTACCCATCACTCTTATAAGCAGGAAGGGGAAGGAGA
AGCAGCAGCCTGCCAGTCCCACTCACACACTTGACAGGACTAGACGGGAAGGCCGAAACA
GAGGAGAGCAGAGCATTTCCAGGGATAGAGGGAGGGATTTCCCCGGCTCCCCCTCCGTGC
AGTGCCGAGCCGTCCCGATGTCTAGCGACCCTGAAGAGATCAAGGCTCGCGTCGTCGTCC
ACGGCGCCGACGCCGAGGCCGACGCCGCCGACGAGTGGGCTCGCCCGGAGCTCGAGGCTT
TCCACCTCCCCTCCACCTCCCAGCCCCCACACTTGTTCCACCCACCGCACCCAGACCCAG
AAGCAGAGCAATCCACACCAGCGCCGGCCGTGGCAGCAGGTGCCACCAACAATGCGTCCA
GCTCTCCCCCTCCCCCTCGCTCGCCGCCTCCCGCGCCAATGGAGACAGAGAAGCTTCCGC
CCAATGCCAAGCCGTATGCCGGCGAGAAGCCGCCCCCTCCGGCGCCGGCGGCCGCCCTGC
GCGACCTGTTCCGCTTCGCCGACGGCCTAGATCGCGTCCTAATGGCCGTCGGCACGCTCG
GCGCTCTCGTCCACGGTTGCTCCCTCCCCGTCTTTCTCCGCTTCTTCGCCGACCTCGTCG
ATTCCTTCGGCTCCCACGCCGACGACCCCGACACCATGGTCCGCCTCGTCGTCAAGTACG
CCTTCTACTTCCTCGTCGTCGGCGCCGCCATCTGGGCGTCGTCCTGGGCGGAGATTTCCT
GCTGGATGTGGACCGGCGAGCGCCAGTCCACGCGGATGCGGATCCGGTACCTCCAGGCGG
CGCTCAAGCAGGACGTCTCCTTCTTCGACACTGACGTGCGCACCTCCGACGTCATCTATG
CCATCAACGCCGACGCAGTCATCGTCCAGGACGCCATCAGCGAGAAGCTCGGCAACCTCA
TCCACTACATGGCCACCTTCGTCGCCGGCTTCGTCGTCGGCTTCACTGCGGCGTGGCAGC
TCGCGCTCGTCACGCTCGCCGTCGTGCCGCTCATCGCCGTCATCGGCGGCCTCACCGCCG
CCACCATGGGCAAGCTCTCCTCCAAGAGCCAGGACGCGCTCTCCAGCGCCAGCAACATCG
CAGAGCAGGCCCTGTCGCAGATACGGATCGTGCAGTCGTTCGTCGGCGAGGAGCGGGTGG
CGCAGGCCTACTCGTCGGCGCTAGCGGTGGCGCAGAGGATCGGCTACCGGAACGGCTTTG
CTAAGGGCCTTGGGCTGGGCGGCACCTACTTTACTGTCTTCTGCTGCTACGCTCTGCTCC
TCTGGTATGGCGGTCACCTCGTCCGCGGCCACCACACAAACGGCGGGCTGGCCATCGCCA
CCATGTTCTCCGTCATGATCGGCGGACTGTAAGTCGTCTTACCCATCACTCTTTACCTTG
CTGCCGCTGAATCATGACATTTCTGGTCAGTCAATTATGACATTCTGGCCTTTTTGTTGT
TGTGCGAGCAGCGCTCTTGGGCAGTCGGCGCCTAGCATGGCGGCGTTTGCCAAGGCGAGG
GTTGCGGCGGCGAAGATCTTCCGCATCATCGACCACACGCCAGGCATCACCAAGGAAGGC
GACGCCGGCGTGGAGCTGGAGTCGGTGACCGGGCGGCTGCAGCTGAGAAACGTGGAGTTC
GCGTACCCGTCCCGGCCGGACACGCCGATTCTGCGCCGCTTCTCTCTAAGCGTGCCGGCC
GGGAAGACGGTCGCGCTGGTTGGCAGCTCTGGCTCAGGGAAGAGCACGGTGGTGTCCCTG
ATCGAGAGGTTCTACGACCCGAGTTCAGGTCTGACTCTCAAGTTTTCTGTCTTGAGTTGG
CCATTAACTTACATTTGCAAGCAGAGCACAGAAGTGAGTTAGCAGGAGCTTGTTAAAATG
CGAGCAGGGCAAATCATGCTTGACGGCGTTGAGCTCAAGGATCTGAAGCTGCGGTGGCTG
CGGTCGCAGATCGGCCTGGTGAGCCAGGAGCCGGCGCTTTTCGCGACAAGCATCAGGGAG
AACCTGCTGCTCGGGAGGGAGGAGGCGAGCCAGGTGGAGATGGAGGAGGCCGCAAGGGTC
GCCAACGCCCACTCCTTCATCATCAAGCTCCCCGACGGCTACGACACGCAGGTCCGTCCG
TTGCTCATTCTCTCCGGCAATCATATCATATTCATCCCAAGCCTCCGCCAGCGCCGCGCG
TGCTACCTTCTTCCTTTTTATCCGTCCGATCCGTGCGCCATTAGGCTGGCTGGCTGGCAT
AGCAGATAGCTTGCTCTTTCCACCAACCACTTTCCTCATCACGGCCATCATTTGCCCTTT
GCCGTGGAGAAGCGGAGAGAAGCTAGATACCCCCGGCTCAGATCGGATGCTTGGCACTCC
GTTTGTTTGTTTGTTTGTTAGGCAACAGCATGACATGTTGACACCTTCTCTTCTCTTCTC
GTCTGGGCTCCATCACAGGGCCCATAGTCAAATACTCTACTACAGTATTTCACCACGAAG
AAGGAGGAGGAGTGGTAGCAGTTGTTAGGGGCATGTTGCTTTAAATGCTGTTAAGAGTTG
GTAACAGTTACTGGTGCATGCCTGCCTCCTACATTTTCGAAAAGTCCCTTTCTCAGCACA
AACTAACGAACACATGCAGCTGAATCGAAAATGGTCCATGATTAAAGGAGGGGATGGTTT
CACACCAGTACTCTTTTCCTGCCTCCTTATATTTTGCTCTAGCCCAGCAGTAAACTAATT
CCAGGTCGGCGTTTTGTCAGGAATGTCAAGTTGATCACACAAGATTCAAGCATCATTTGT
CCAGTAGTATGCTCGATGCTGCTTTTTTTTCGGCACTGGCACAGCACTTACTTGACCAAA
AGCTGCCATTGATAATTGATCCAAGCAAGCACATGGGCTACACCGATCCAAACTCCCTTC
CCTAGTAGTGCTCCATCGACACCGACCCCGTCACATGGCACCATGCTCTGTTCCCAGTCA
AAACTCCACCATAAACAATTCTGTTACTCCACATTTTTATATTTTATACCACTAGAGTCA
AAATTATTCTGGCTTCCAGTCAAAATTCCCACATAAACAAGCGCACATGCACACGACACG
ACTGTACCACTAGTCACAAGTCGATATCCCCCGCAAAAAAAAAAATGGTCACAAGTCAAT
ATGTTTGAACATGGTGATACAGGTGGGGGAGCGCGGCCTGCAGCTCTCCGGCGGCCAGAA
GCAGCGGATCGCCATTGCCCGTGCGATGCTCAAGAACCCGGCCATCCTCCTCCTGGACGA
GGCCACCAGCGCCCTGGACTCCGAGTCCGAGAAGCTCGTGCAGGAGGCGCTGGACCGCTT
CATGATCGGCCGCACCACCCTCGTCATCGCACACAGGCTCTCCACCATACGCAAGGCCGA
CCTCGTCGCCGTCCTGCAGGCTGGCGCCGTCTCCGAGATGGGCGCGCACGACGACCTCAT
GGCCAGAGGAGACAGCGGCGCCTACGCCAAGCTCATCCGCATGCAGGAGCAGGCGCACGA
GGCGGCCCTCGTCAGCGCCAGGAGGAGCAGCGCAAGGCCCTCCAGCGCCCGCAACTCCGT
CAGCTCACCCATCATGATGCGCAACTCCTCCTACGGCCGCTCGCCCTACTCCCGCCGCCT
CTCGGACTTCTCCACCGCTGACTTCAGCCTGTCCGTCATACATGACCCGGCCGCCCACCG
GATGGGCATGGGGATGGAGAAGCTCGCGTTCCGTGCGCAGGCGAGCTCCTTCTGGCGGCT
GGCCAAGATGAACTCGCCCGAGTGGGGCTACGCGGTCGCCGGCTCCCTGGGATCCATGGT
GTGCGGCTCCTTCAGCGCCATCTTTGCCTACATCCTAAGCGCGGTGCTCAGCATCTACTA
CACGCCGGACCCGAGGCACATGGACCGGGAGATCGCCAAGTACTGCTACCTCCTCATCGG
CATGTCCTCCGCGGCGCTGCTCTTCAACACCGTGCAGCACCTCTTCTGGGACACGGTCGG
CGAGAACCTGACCAAACGCGTGCGCGAGAAGATGCTCACGGCGGTGCTCCGCAACGAGAT
GGCCTGGTTCGACATGGAGGCCAACGCCAGCGCGCACATAGCCGCCAGGCTCGCGCTGGA
CGCCCAGAACGTGCGCTCCGCCATCGGGGACCGCATCTCCGTCATCGTGCAGAACTCGGC
GCTTATGCTCGTCGCATGCACCGCCGGGTTCGTCCTGCAGTGGCGCCTCGCGCTCGTGCT
CCTCGCCGTCTTCCCGCTCGTCGTTGGCGCCACCGTGCTGCAGAAGATGTTCATGAAGGG
CTTCTCCGGTGACCTGGAAGGCGCGCACGCCAAGGCGACGCAGATTGCCGGGGAGGCGGT
GGCCAACGTGCGCACCGTGGCGGCGTTCAACTCGGAGGACAAGATCACGAGGCTCTTCGA
GGCCAACCTGCACAGGCCGCTCCGGCGCTGCTTCTGGAAGGGGCAGATCGCCGGCATCGG
CTACGGTGTGGCGCAGTTCCTGCTGTACGCGTCCTACGCGCTGGGCCTGTGGTACGCTGC
ATGGCTGGTGAAGCACGGCATCTCCGACTTCTCCAAGACCATCCGCGTCTTCATGGTGCT
CATGGTCTCCGCCAACGGTGCCGCCGAGACGCTGACGCTGGCGCCGGACTTCATCAAGGG
CGGGCGGGCCATGCACTCGGTGTTCGAGACCATCGACCGCAAGACGGAAATCGAGCCCGA
CGACGTGGACACCGCAGCCGTCCCCGAGCGGCCCAGGGGCGACGTGGAGCTGAAGCACGT
CGACTTCTCGTACCCGTCGCGGCCGGACATTCAGGTCTTCCGGGACCTGAGCCTCCGCGC
CCGCGCCGGCAGGACGCTGGCGCTGGTGGGGCCGAGCGGGTGCGGCAAGAGCTCCGTGCT
GGCGCTGATCCAGCGCTTCTACGAACCCAGCTCCGGGCGCGTGCTCCTGGACGGCAAGGA
CATCCGCAAGTACAACCTCAAGGCACTGCGGCGGGTGGTGGCCATGGTGCCGCAGGAGCC
GGTTCTTTTCGCCGGCACCATCCACGACAACATCGCGTACGGGCGCGAGGGCGCGACGGA
GGCGGAGGTGGTGGAGGCGGCAACGCAGGCGAACGCGCACAAGTTCGTGTCGGCCCTGCC
GGAAGGGTACAAGACGTGCGTCGGGGAGCGCGGGGTACAGCTGTCTGGAGGGCAGCGGCA
GCGGATCGCCATCGCGCGAGCGCTGGTGAAGCAGGCGGCCATCATGCTGCTGGACGAGGC
GACGAGTGCGCTGGACGCCGAGTCGGAGCGCTGCGTGCAGGAAGCGCTGGACCGGGCCGG
GTCAGGGCGGACGACCATCATCGTGGTAGCGCACCGGCTGGCTACGGTGCGGAACGCGCA
CACCATCGCGGTCATCGACGACGGCAAGGTGGTGGAGCAAGGGTCGCACTCGCACCTGCT
CAACCATCACCCCGACGGATGCTACGCGCGGATGCTGCAGCTGCAGCGCCTCACGCCCCA
CACCGTGGCCATGCCCGTTCCCGGACCATCTGCATCCAACGTTTGATACAATCTTCCATG
CACGCTTCTGCTCGCGTTTTTGTTTTAGGATCTTCATTTCTCTTATCATTGGTTTCTGGC
GGGATGACAAGCCGTGTGTGCTGCCATGATGTTACAGCGCAAGACAAATCCAATTTATCG
TGGTGGGGTACAAATTTGATAATTCACTTGTCCACAGACAGCTTTGGCCATTTGTCCGTC
CACGTGGTGGCCCTATTTCTCGAACCAGAGACCGATACACATTTGTTGTGTGTGAAGGGA
AAGCCTCTTTGCACTTTTGTTGCATATAGATATAAAATCTTACATCATTTAGAACATACT
CATGAAAAAGGATTTCCCCCGCTTTTGTATTACAATGAAATCAATCGATACTGGCTCTTT
TATTACAAAGCAATCAATCGATACAGCCAATAATAGATGCTGGAACGGAAGCAACACAGT
CACGTTCAAAAAAAAAAAGAGAAAACACAAAAGAAACAAATGTTAGCAACCCCAGATCGA
CGTAAGCAATGATTTCCGCAACTGATGCGTACTTCAACTGATGCGTTCTTCGAAGGATTC
CCACCATGCTCCTATTCCTTCGAGTTGTCGTGTACCAAGCAACACCTTCAAAAGAACAGC
GATGATAACGACGTTGTTGTCTGGACGGGTCCTACCCGGTACACGGGGGAGTTGGTAAGT
GTTATGGTTGCTAGGGTTTGAGCGGGAGAGAGAGAGAGAGCTGCGAGGGCGCGAGAGAGC
CGGCCGTGGGGGTCCTTTCCCACAGCCGGGCAAGAGGGAAAAGGGTTTTC