| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_136269
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_5431 |
3 |
2476 bp |
MLOC_5431.2 |
Available |
Available |
LOC_Os02g55130.2, FRAME:+1, EVALUE:0.0, 13102.m06317 protein OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed |
CDS Structure of MLOC_5431
Contig Sequence (10000 bp)
>contig_136269 10000 assembly3_WGSMorex_rbca.fasta
CGCCACCGTCGGCGGGCGCCTCGGGCGCTGGCCCGAGTGTTTTCGACGGCGGCGGGCCTT
CCTTTCCCCGCGTGCTTGGTTCCCATTCCCGGGGCAGGGGACGGCGGCGGTGCAACTTGG
CTGGATGCGGTCAGACGACCTGGTGGTGGTGGCCAGCGGGTGAGGTGGTGGCACTGCTCT
TTGGTGGCAGGGCATGATGGTGGTGCGGGGTGACCGGCGACGCGTCCCCGGCCCAGATAT
GGGCCATGTGGGCCCCATCTGGGTCCTAGTGGGTCGGCTACCAACGTGGATGCGGTGTCT
TCTGCATCGTGGTGCGTCTGGTCGGCTGCCGTTGTCGACGGTGGAGGTTCAGCCCTCCTG
CGTGCCGAAGGTGCTGTTGCTCCTAGTCCCGGCTCTTCTTTCGCTGTGCAGGCCTCTCCT
TACGACGCTGTGGTGAAACGGTGCAGGGGCCTCAATACCGTGTTGGTGCAGGGTGTAGGT
CGGTTGGTGGCAGGCTCTGGAGCGTCCGAGGTGCAGGTTGGGATCGGGGAAAACCCATGT
CGGCCTGGCCGAAACTGACGCGGTGACGTCGTTGGATGTCGTCGAACCTTCTTGGAGGGC
GTCGGGGCTACCCTTCCTCGCGCCTCGTCACGTACCAGGGAAAACCCTTGGCAATAGTGT
CATCATCGTCGCATTCCTTCTTGAAGGTGTTGATGGGTACCGGCGCTTTGGAGTCTTGGA
GCTTGGTGGAAGACTCTTGGTGGGCACAACACTCGCGAGTCTTTTGTGTTTTTTGTCGAT
CCATCGGTGTAGGCATTTATTTTTTTGTATTTTCTTTTCCATTTCTTTTTGACGTGACTA
TGATGTTTTTGTCCGAGCACCTATCGTCGGGTGTACTGTTCGGTTGCTTTGTAATACAAA
ACGGAGGAAATTCTTTTTCGTCTTTAGGAACACAAAGAGTACTTCCTTCGTTTCTTTTTA
GTCCGCATATAAGATTTGATCAAAATCAAACTTCATAAACTTTGANNNNATTTATAGAAT
AAAATATCAACATTTATAATATTGAATCAATATTAGTAGATGCATCATAATATTAATTTT
CATAGCATATAGGTTTAGTATTATAGATGTTGATACTTTTGATATATATTTGGTCAAACT
TTGTATCACTTGACTTTGATCAAATCTTATATGTAGATTAAAAAGAAACGTAGGAAGTAT
TATACATGCTCTGAGTGGTGGTTGGAGTCAGAGGAATAGGAAGATTCGTGCTCGCCATTG
CAAATCCGGCTACGCACGCCATCGCTCTCGCATACATGCAGTGATGCATGTGAGCCTTTC
CATATCTTCCAGGAAATTCGACGGTCCAGTTTACATGCATGTGAGCGCGACGACGGACGG
GTAGGATTAGGATGGACGGAGGCATCGGTGTGGCATGGGCTCATGTCAGCACATTGCACG
GAAGAAGCAACGATCGATCGATCTGCATGCAGGAGGTGCAATAATACACACGAATACGAT
CGATCGAGTAGGACGAACCCAATCAGAACCTCGACGACTCCATCAGTCTTTACCAAGGCA
GGCGATCAAACCCATCCGGTACACGTACGCTTCCCTGCTGTCCTCGTGCTGTCAACGTTA
GCATGTTGCTTGCCCCGTACTCTCTCCGTTTATTTTTACTCAGCGTATAAGATTTGATCA
AACTCGAACGACATAAAGTTTGATCAAATTTATATAAAAGAAATATGGATATCTACTATA
TCAAAATTATATAGTATAAAAATACATCTCGTGGTGCATCTGATAATATTGACGTTGATA
TTTTTTAATATAAAGTTAGTCAAACTTTACAAAGCTTGACTTTGACCAAACCTTATATGC
AAACTAAAAAGAAACGGAGGAAGTACGTACGTACGCTGTCGTCTTCACTTCATCATTTGG
CCCTACGGATGGACGTGCCGGCCACCCGGCCAACCACGCAACGACACGTATAAACGTCTA
ACAAGGGAACTTGTAATGGTAGTACAACAACTAGTGCCCTCGTACTACTAAGGGCATATA
TAATGGTGTTATCTTAGAAGTGTCACATACGATAAATGATGAGGTGGAAAAAAAAGAATT
TGAAAAAAAAACTTTGCTTTTTTTTATTTAAGAGAAGACAAGGGGTGATTTTTAGCACAA
TATGTCTTATCATGTCTTTAGAAATAGCTAATTATAGAAGATAATGCTAAAAGATGATTC
ATTGTAGACTTTTTTTTGTCATCTCTAAATTATATGCAAGATTTAAGATAAGACTACCGT
ATCAATCATCATACAGTACATGCAAGGGACGAATTACTGTAGCAACTGCAGGGGCTTTTC
TGTATTCAAAAAAGAAAAAACCGCAGGGGCTTTTCTCGCCTGGCCTACACGGAAAGGCAC
GTAAAAACTTTCCACTGGTAAATCCCATCTGCAGCCGGGCCACCTTTTGCTCTGTTTCAT
AGCGTGTGTAGCATACAGCACAAGAAGCACTCATCAACAGTGACAGTGAGGAATCGTAAC
TCGTGAGGAAAAGATAGAGAGCGCTGCGCTGGTGCAGCAGCCCCAGCGTGCAGTGGTTGC
TGGAGTGTACAAGTCACTGCATTAATGCCCGTGGTCAATCTCCAGCCAGCCTCCCCCCGT
GCCCCGTCTCGTCTCAACTCAATCGACGTAGGCGGTAGGCCAGACGATGAGCCGAGGTCG
TCGACGGGACGGAGGGGTATTAATGGCGGCGTAGGCTCCCCTCATCTACCGCCCGCAGCG
CAGCGCAGCAGCGTAGCTCGCACTCACCTCACCTCACCTCACCTGCCCTCCGTCCTCTCC
CCCTGCATCTGCATGCCCAGGCCATGAACGCTCACGCCGAGCTGCTGCTGAGCTCCCAAG
CTTAAATGCCCCGCAGAGCCGCCCATGCCCGATCCGATGCCGCATTATTGCATCTGCATG
CGCGCCACCACCCCCACCCCCACTAGCCACCTCTGAGCTCGCGTGCTTGGGCTCCGACCG
ACGATAAATACCACTGCATGCGCCCGGCGGCCACGGCCAGCCTCTTCTCTGTGCTGTGCG
CGCTTCCGTCCGTAGTCCACGACATCCCGACACGAGCCGTCGCGTCAATGGCGACCCGGC
GTCGAGCGGCGGGCGGCGGCGGCGTTGCAGGCGCCGTGGCGAGCGTCTTGGTGCTGTGGC
TGGCGACCGGAGGCGCTGCCGGGCTCGTCGTCGCCGCCGACCCTCGTGCGGAGGAGCGGG
CGCGGGACCGCGTGACGGCGCTGCCGGGGCAGCCGGCGGTGGCCTTCGCGCAGTACTCCG
GGTACGTGACGGTGAGCGAGCCGCACGGGCGCGCGCTCTTCTACTGGCTCACCGAGGCCG
CCGCCGGCGACCCGGCCGGCAAGCCCCTCGTCCTCTGGCTCAACGGAGGTAAGCAAGCAA
ACCAACCACCGTACATTTCTTCGTGTGCTTGCCTGCTTCTCCCATGATCTCGTCTGGAAG
GAATTCACTGTGTGCTTGCTTATTTTTGGTTATTTCTCTTCTTTCTTCGCTCACTCTCAC
GGTCGGTTCAGACTTCAGAGTCTCACCGATCGCGTTTGACCAAACCGTTGCTGCGGTCTC
CCGATCATCATGAGCCTCCTAACGCTTACTTTCGCCACCTTTTATACATGGTTTTAAAAG
GATGAAACTTTCCTTGGCTTTCGACACGAACTTCAAAGTTGTTCAAACCCGGTGCAAACA
CGCCTGCATAGCCACAGTAACCAGAGGAAAGCCCCATGATTCCCCTAGCTCTGATTCTCA
AACAAACAATATACTACTACTCCAACCTTAATGCACAGTTGCACACACCCACACACCCAC
AAGTGTATGCACGAACTGGAACTTGACATGATTCCAGGCCGCTGTTTCTTTCACCGAGCT
GGATAGCTTGGCACCTTCTTCTTCACTTGGTGAAGGAAGGACAATGTACTGGTGATTTTT
CTCGTTTTGGGAGTTTGGGTGGGGCGGCCGTATGTCCGTATGACGGAGATGGCACGTGGT
AGTGAATGCGCGCGCAGGGGGTGAGTAAATGTGCGGGCGAGGACATGACCGATGCATGAA
ACACGAGCATGGATTGCAGGTTCAGACTTCAGAATGCAGGAGCTAGCAGCCTTCGGGGTG
CCAGCTTGGCCTTGCCCGTGCAACACATGCATGCATGCATGCATGACAAGTTCTATCTAT
CGTACTACGTTTTGCTTTGCTTTTTTGACATGAAACTTCATCCTTCAGGGGGAGAGAGAG
AAGAAGAAACAACATAAACCATTAGCCATTGGAGGCCAGACAGTGGTTGTAATTAAACAA
TTAGCCATTAGAGGCTGTAGAGAACGAAGCAGTAAATAGGCCGGCCACCTCGGTTGGTAG
CTCTCAGGGGGGTGTTTGGTTACAGGGACTTATTAGGGACTTGGAACTTATAAGTCCCTT
TAAGTCCCATCTAAACCAAACAAGAGGGACTTACAGGGACTTAAAGTAGTCATTTGGGAC
TTATGAAATAAGACTCTCAAGGAGAGACTTATAGAGACTTATAGTTGTAGTATGGTTTTA
AAAGGACTTATAAGTCCTAGAAACCAAACAGATAGAAACTTTTTAGGGACTTGGACTTAT
AAGTTGGGACTAAAAAAGTCCTAGGACTTATGAACCAAACAGGGCTTGAATGGAGTGTGG
TCTTCCGTAGGAGTATCCTGTCTATAGTACTACTACCAGGTGACATGCACGTTCCATTAT
TAGTCATAAACAACTCGTGTTACATAAGCAAAGTACCATGTACCCATTGCCTGCACATGT
TAGCGCAGAGATTTGTCTTATGCACGTAAAGACATGGTGCTTAGCCTCTCCTAATCGCAC
TGCCGTCACCCCGTACAAAATCCCAATCGCTCTGAAGCCGGCTGCCTGCATGCATGCATG
CCCCTGCCTTGCGAATGCAGTGCCACCCAAATTCCTATGCACCTGATCCTTCTGTCCTGC
GCTGCTGAGCACTACACCGCACCACAACTGCGCGACAGCGGGGCGTCGTCCTCGATGGCG
CAGGTGGCCAGGCCGGCCAGCCGTCGCCGATGCAGAGGCCGATCTGGCCGGAGCCTGAGG
CCTGCCTGATGAATGTACCCCGTCCTTGGAGATCCACGAGATCTTGGCCACAGTGCTCTG
CTCGCTGCTTCCTCATGTGAGCGCTGCATGCGATGCCGCAGGGATGGAGGGGGCCAGCCG
GCCAGGGCCACAGCCCACGGCCATGGACGAAATGATGATCGATGAGCTATGCATGTTGTG
GTAGGCGTCGTGCAGCTAGCCCGCAGATATACGTGTTTGGTTCGTGCGTGCGTGACCACC
GGAAAGGAAAAAGAGGCTGCGACGGCGAGCGGCACGCAGGCCACCACCACCTCTCGTCGT
TGTGTTTTCCGCTGCATGCATGCTGGGGTAGTAATCTTTTGTTGCTAATAATGCCAGGGC
CGATGGCCACTAGCGTGTACTCCCCTTGATATTCCCTTTGCTCCGTCTCTCTCGTCGCTG
TCACTCACGCGCCGGGCCGGGCGCGTCCGGGGGCTACACACCAAACCGAAACCTCGCCCC
ACACTGGCACAAAGGCACGAGGATATGTTCGATGTGTGGCCAGTCACTGTGTTTTTGCAC
ATTGTCCTGTTCGGCAGCGCAATGCAGTAGGCTTCTGAGACGCATGCAGGATGCAGATGC
AGATGGCGACCCTCTCTCTGCGTCTCCGTGGGCGGTGGCCTTTTCCTCCTTGCACGCAGG
CGCATGGCATGGCGCTGGCACGGAGCCAGACTGCGAGAGCGAGAGCGATCGATGATGCGC
TGCGCTGCCGCCGGCCGTGGTTTGTTTTCCTTTGACCTGCGCCTCGGGAATTGGGGGCAG
GCAGGCACAAACGGCCGGCGCACGCCTCTGCCGCCGGCCGCATGCGCCCCTTTTCTCCTC
CGCCTCCCTCGCGATCAGGATACGCTTTGCTTGACTGAAGAAGCACACCTTAATCTTATC
CGCGGTAGATTTTGTGTAAAAAAATGACAAGTGTCCGCCGTAATAAGCAGACCATTTAAC
TGCCAGTGTCACTACTGGACTGTTTGTTTGTTTATCCCGTCGGCACCGACCATGATCGTG
GTCTGCTCTGAATCTCTGCCATGCCGCCTATCATGCCCTAGCTTTTGCCTTCATGCTCTG
TCAAGTACAGTGCGCATGGCCCTACTTGATGCGCGCATCTCACTTGCCGCATCATGACAA
CCTCCTCACTTCCATGGCAATTGGCAACACAAGATGAATCTCCCATCCATCTTCAAATGG
GAGTGCAAACCTAGTACTGTGGTATAACTATTATTTTTTATTTTGCGCCTTCCACCAATG
GAGTTCTCTGAATAATTTTGCTTCTCAGGGCCTGGGTGCTCCTCCGTGGCTTACGGCGCG
TCCGAGGAGATCGGCCCGTTCCGGATCAAGCCCAACGGGACGGGGCTCTTCCTCAACAAG
TACTCGTGGAACAGAGGTGAGCAGATCGACCAGCAGAGCCTCAGATACAACTGCTGCTGT
TATGGTGACTCGCTGAATTTCGTTGCTGACTGCAGAGGCAAACCTTCTCTTCCTCGAGTC
CCCCGCCGGCGTCGGCTTCTCCTACTCCAACACCTCCTCCGATCTCAAGACCTCCGGCGA
CGAGAGGACCGGTAATCCTCCATCATATGACAAGTCCGGCTCATGAAAATGTTTGACAGT
TCAAGTCTAGTAATTTTGATGTTGCTGTGGAATGTGATGCAGCTCAAGACTCGCTGCAGT
TCCTGATCGGCTGGATGTCGCGGTTCCCGCAGTACCGGCACCGGGACTTCTACATCGCCG
GAGAAAGCTACGCCGGTGAGTGTGTGGTGTAACTGGGAACTCAGTGGGTAGCCTTCTTTC
CGTAGTTCTCTGGCTTTCAGAGCACCAGGAGAAAAAAAATCCATGATAACTGTCACACTA
GCACCATGTCCCAGGAATAATGACCAGCGCCACCTGAAAAGCACTTACATTCACTCTTGG
GATCAATTCCTTTTTATCTCCAGGCCACTACGTGCCACAGTTGGCGAGGAAGATCGTCGA
GTACAACAAGGCTTCGCCGAATCCCTTCATCAACCTAAAAGGAATCCTTGTGAGTACCAC
ACTCGCTCAAAAGCAGCTACAGCATTTCATTCACTGGATCGATCGCACTGAGCTGAATCT
TCCATCTTTTTGTTGATCGTGATGATGTACCCAGGTGGGGAACGCGGTGACCGACAACTA
CTACGACAACATCGGCACGGTGACCTACTGGTGGACGCACGCCATGATCTCCGACGGCAC
CTACAGAGCCATCCTCAAGCTCTGCAACTTCACCAGCGCCAATGTTTCGAATGCCTGCAA
CCGGGCCATGAGCTACGCCATGAACCACGAGTTCGGGGACATCGACCAGTACAGCATCTA
CACGCCCTCCTGCCACTCCACCTCCGACTCGTCGGCGGCATCCGGCAACTCCACTGCACC
CCGCAGGCACCGCCGTGCAGTGCTCAGGTTCAAGGACACCCTCATACGCCGGAGGTCCAA
CAGCTACGACCCCTGCACTGAGACCTACGCCGAGAGGTACTACAACCGTCTCGACGTGCA
GAAGGCCATGCATGCCAACATAACTAGGATCCCCTACAGATGGACCGCCTGCAGGTTCAG
TTTCAGACATACTTTCTTCTCTGTTCTTGTTATGGCTGGGTCATGGAATAGAAGATTAAC
AAGCAGGGTATGCTTTGACATTGACAGTGATGTGCTCATCAAGACATGGAATGACTCCGA
GTTGTCGATGCTGCCGACGTACAGGATGCTGATCAAGGCTGGGATCAGGATATGGGTGTT
CAGGTAAGCTGAAGAGTCTGAAACCGGCAAAAAATTTCTTCGATGCAGCACGCAAAGTTT
TAAGTGGGTGTAACATGTTTTCAATGCTGAGTGCAGCGGCGACACGGATTCGGTTGTCCC
AGTGACCGCAACGAGATTTTCGCTCAGCCACCTTAATCTGAAGACTAAGATCCGCTGGTA
CCCATGGTATTCAGCTGGTCAGGTACTTGTGATGGCACTACTTTTCTGCACTTGAACTTT
ATGCAACAATGATGTTGCAGTGACAGAGTACCACTTTGCATTTGCAGGTAGGAGGGTGGT
CTGAGGTGTATGAAGGTCTGACATTTGCGTCGGTGAGAGGCGCAGGGCATGAGGTGCCAT
TGTTCCAGCCAAGGAGGGCATTCAGGATGTTCGTGTCATTCCTGGCTGGGAAGCCATTGC
CCAAATCCTGAAGGTTCGTGCCTGCCATGAACATGAACTGATGATGTGCAGCGTGATGCC
TAGCTAAACGTCTGAAAACTGTTGTAAGATGGATGGAGAGAGTGATGTAGAGTGCTTGCA
AGTAGTAGAAAATAACTAGTAGTTCATAGGCTACGAGTGATTGATTTGGTGCTGGTGAAC
AGGATGAGAAGAGAATAAGGGTGATTATGCCATGGAAACCATGGGCATTTGCAGCAACGA
GCGAATAAACTTGAAGGCTCTATTCTTGATGTTGCCATATCAGTTTCATATGAAGAATAT
TTATTTTATCTTCCATGCCAAACAATGCAGAGATGGCAACACCATGAACACCAAGAAAAT
TTCTCATATAACCCATAAAGTCACAGTCATCAGTAATTTATTTCCCATGGAAACAGGTAT
CAAGCTCGCTAACCATTAAACCATACAGGAGCAGCATTGAAAAACAAGACAACTCGTCTA
ACTGAATCTCAAATACAGTACCATGTTCTGCAACATCCATGAAAGCAAATGCAGCATCCT
CATGGGACTGGAGAAGAATCAGACCTTGAAGCCCTCGGCATGGAGGCATCGCTTGTGAGC
CTTGATCCACTTGGTGCACGCAGAATCCCCGTACATGACGATGCACTCATCTCTGAGCCT
CTTGGTGTCAGGGCAAGCTCAGCATATCTTCTTCTTCAGCTTCGAGTCAGTGGCAGGAGC
TGCTGGGACTTCGTTCACAATGGAGCAAGCAGCTGGCCTGCTGGGCCTTCGTTCACAATC
GAGCACACAGGTGACTGCATGGGCATTGGGGCTTTCCTGACTACAAAATTGTCCATTTTT
ATTTCCAAAACATGTTCTCTTTTAAAAAAGAATATTTTCAAAATTGTCCACTTGAGGTGC
CACCACCAAAATTGAGGATCATCCAAAATTGTGATGTACTTACTCAGGAAAGAGATAAAA
AGAACATAACCTCCCACTTGAGGTGCCACCACCAGAGCCAGACCACCAGATTATCAACCC
GAACTGGATGATCCTCTCTGCTTCATGTGATTGGGTATTCAGACCAATTCAAGTACCTGG
GGTTGCCGGCTCGACCATATTAATGGCCCTCTTTTTGACCTTACTCTTCCGCGTGCAAAT
ACTAATGGTGAACACGTGATATTGTTGGCTGCTCAGTTGCTTGGAATTACTTTGAAATCC
GGCTTGATTATCATGCTGATGATTTTAATCAGATAATATCATGAAATTCTCCTCCTAAGG
GCCAACGCCCCCATGCAGTCTCCTGTGTACCCATGCTGATGATTTCAATCAGATAATATC
ATGAAATTCTCCTGCTATGGGCCAAGGCCATGTAGTCACTTGTGTTTCTCCTGCTAAAGG
CCAAGAAATTCTTAATGAAATCCACGCGGGAGAGTGTGGTTATCATGCTGGTTCCAGGTC
TTTGGTTGCAAAAGCTTATCGGCATTGTTTTTACTAGCTTACCGCTCATGCTGATGGAGA
AGACATTGTGTGAACGAGCGATGGCTACCAGAAATTATGTCACCAACATACATAACCCAA
TAATAATATATCGTGACCGGACGTATCGTCATCGGACGTTAAGCGGGGTTCGAGAATCAT
GTGGGCATGACCGAGAGACCTCTCTGGTCAATAACCAATAGCNNNACCTGGATGCCCATA
TTAGTTCCCACATATTCCACGAAGATCTTTATTGGTCGAA
