Contig Data
morexGenes
Links



Map Locations of contig_136242 (6767 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_136242

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_5404 2 1555 bp MLOC_5404.1 Available Available LOC_Os02g36600.1, FRAME:-1, EVALUE:3e-159, 13102.m03996 protein aldose 1-epimerase, putative, expressed





CDS Structure of MLOC_5404






Contig Sequence (6767 bp)

>contig_136242 6767 assembly3_WGSMorex_rbca.fasta
CGGCTCGGGAGGGTCCGGACGTCCGACGATCCGGCTCGGTCGAGGTGGCGTCGGATTTCT
GGGCGTGTTGGTCGTCCAAGGCTCGGTCGTCCGAGTGGTGTCGGCCGTCCGGGCGCTATG
ACGGGAGGACGGGCGGCTGCAGGCATCAGTCGTCCGGATGAGCTCGGACGTCCGGACGCT
GGGATGGTTCGGACATCCGATGGGGCTCGGTCGTCCGACCTCTGGAGCGTTCAACTTCAA
CTATTATTCTTCCGTCTCCTCTTCCATGCTTCCCACGCAGATGGTGTGCTCGTACGCAGG
TGCTGGCACTCCTCCTCGTCATTCGTGAAGCTACGGCAATACCTATGCATGCACACGAGA
GGAGTGCCAAGTAGTATACCATCCTCGAAGGGCACAAGCTGACACGTGTAAAGGAGAAGA
TTCACCTTTGTATGTGTGAAGTAGATGTAGCACATGTCACTTGGCAAAGGGACTATTGCC
ATGGTAATGTCTCTAGGATGTTCTGTACCATCTTCTATGCCACCATCTACATTACCATTG
GCAATGGCATCTTTTGTGTGATTCACCTTGGGTCATTGAAGAGAAATCAATTGGTATTGC
TCTAATAGTCTTTGAGGCCTCTTCTAGAAAAAAAGAATAGAAGTTGAGGAAAGCCATGCA
CGAGGATGCGTGGCTTGCCAAGATAAATATCCATATCCATTGGACGATGGACCATATATA
TCTGGCAAATTGCCATTCTTTGGGCTCGCACGCGCATCATTCACCTTGTGGATTACGTTG
TAGACAATATCACTTTGAAGCATATGGTTAATTGGTGGTCACTGCTCCGCCACTTTCGCT
TACAAGGCTCGGTTCTTGGGGCTACTCGCTCGCCCATGAACATCGTGGAATGTAAGGCTT
GGCCATCTTCAAAGGTCAACTTTTTTGCGTGATTAGCAATTTAAAACTTTAATTTGAACC
GTGGATAGACTCGAGAAATGTGGGTGGCTAAATTATGGGCTTTGTCCTCTATGTAAGCGG
ATCAAGGAGTTTGTCGCGCATATTTTCTTTAAATACGGTTCACCATGGGACTATAGGGGT
GACTAAGGCTTCGCTCCAGCTCGACAACATCGTCATTTCATTGTGAAATGGAGAGCATTC
TATCAGGAACTGATGGATCAACATGTCCGAGACGAATAGGCCAAAGTGGAAAGCGTTGTC
CTTCCTCACCATGCTCACTTGTTAGACCATTTAGTGCGAAGGAACGTTAGGATATTCCGT
TACAAGTCTACGCTACCGTTCATTCTTCGCTCCAGCATAAAAAATGGGCCAACCTTTGGG
TCATTCACTGGATGAAGCATATGGGCAATAGCAGAATGGAGACTAACGACTTTATAATGT
TTTTTTTTTACTTTGAAAACCTCTTCTAAACTCCTTATTTAATAGCTGAGGCAAACCGTA
TGCGTCATGCGCCCATTTTGTAAAGAAAAAAGTGGATGTAATTAAAGAAAAAAACATGGT
ACAGACCATAAGAAAAGATGTTTCATCCCGTCGAAGAAAACAATGCTCATTTTGCGCTAA
GTAAACGAAAACAAAAGACGGATCGATCAATTAAGTGAAGCATGCATCCTAGCTAGCCTA
GTAGGAGAACTTGAAGAGCATATCATGCTTGTACACCTCGCCGAGCCTCACGATCGACGA
CGGGAATTCGGGGTGGTTGACGGCGTCAGGGTAGGCCTGCGTCTCCAAACACAGCGCGCC
GTACTGCCCGTACACCTCCCCTCCTTTCCCCTTGTCGTTGATGAGCCAGTTGGCGGTGTA
GAGCTGCACCCCGGGCTGGTTCGCCCACAGCTCCAGCGCCCGCCCAGAGTCCGGGTCCTG
GACGCGCGCCACCGGCCGCATCGCGTTCTGCTGCCCGTCCACGGCGAAGTTGATGTCGTA
CCCGCCACCGCCGCCCGGGACGATCTCCATGTTGGCGCCCACGGGCGTCGGCGCCAGGAA
GTCGTACTTTGTGCCGGCCACGGGCGCGACCTGGCCCGTCGGGATCATGTACCCGTCGAC
GGGCGTGTAGCGTGACGCGAATATCTGGACCTCGTGCTCCAGGACGTCGCCGCTGCCGTG
GCCAGCGAGGTTCCAGTACGCGTGGTTCACGAGGTTCACCGGCGTCGCCTTGCCCCTCGC
CGTCGCGTTCATGTGGATGCTCAGGTCGTACGGGTCGGAGAGCTGGTACGTCACATACAC
GTCCAGGTAGCCCGGGAATCCTGCATGCCCCAGACGCGATCCGTGAAAACAAGTGCGCGT
CAGATCTTTCTGTTAACGAAATATTATACCGAGTCCGTCGGTGTCATGAAGATCACCAAA
GCGCGAGGAACTCTGATTATATAAAGTTTTGACATGTGTACTACTAGTATTAGTTTTGGT
TTTACCTTGCTCTCCGTCGAAGCTGTGGTAGTAGAAGGTGATGTACGGGGAGTCGCCGTC
GTGCACGTACTCCTTCACCGTCCAGACGACCTTGTTGAACCCCCTGGGGCCGCCTAGACG
AAGAGCAACATGGCGATTAAATGAGTACAAGCTCGTGCATAGGGTTTCGGTGAAAAATAA
ACTAAAATAAAGTCTGAACCATGCCATGAATCGTGTTGTTGCCGTCGTTACGGAGGAGAC
GATAGGTTCTGCCGTCGAGCACGAAGCGGGCGTTGGCGATTCTGTTTGCTACGCGGCCAA
TAGTTGATCCGGCAGCACCGCCTTTCTGATGAGACATGCACGTACAAAATGATTTTGAAC
TGAATATAGACGCACTGATCATGCATGTTAATTTATCTATCACTCTGAATCAATGAAAAC
AGATGGATTTGTGATCTTACAGCGTATCCAGCAACGGTGTCGTACCCAAGTACAACATCA
GTTAGTTCCCCTGAAAAAATTATTTCACCTCTTGAGAAACAAGATGAAAGCATCCATATG
AGTTCCTGAAAGCAAGAAGCAAGCAGCCTTACCATGGCAGTCAGGGACGAGGACAGACAC
GAGGGTAGCTCCCCAGTTGGTGACCTTGATGGAGAAATCCCCCTTCTTGTTCTTGAGCTC
ATAGAAACCGTCCGCCGCCCCTGCGGCATTGGCGCTGTCGGCCAGTGCAAGGCACAGCAG
CAACGTAACAGGGAGCAGTGCAGCTCTGATCATTGTTGCTAAAAAAGAGAGAGAAGGTAT
TGTATGGCTACCGTCGAGCATGCAATCGCATATGTATGATAGGTTGACGACGACTTCATT
CGGTTCGGTTCCTCTCAAGGTCGTACACGAGGAAAGTCAAAACTCTTCATTCAAGTTTCT
CCGATCCAAATTCTTCCCTTCTTGAGATCTGAGATCGAGCAGAAGTTTATGGCCGGTATT
TCCCAGTTGCAAGATTGTTAATCTCCCACTGGTTTAGGGTGCCGCTAGTGTCGAGTTTTA
CTCATTTAATTTCTTTTCATTGTCTGCGCATCGTCGAGTCCTCGGTACACATCCGAATTA
AATGGAAGCAAAAAAAAAACTTTAAACATGATAAGATACCAGTTTTGTTAGGTCTCAATC
TGTCGGTGAGCAAGTATACCCACTTGGGAAAGATACTTTGCAGACGGACCCTAAGTATGC
AATGTGTCACGTGCAACATTCATTTGCCCACATGATATACATTGTCAATCTCGAGATGAG
TATTTGTCAGCCTTGTCGGGCTGCTCGAGTTCATGATACATATTCCTGAATTAGGTTAAT
ATTTATCCTTAGCCGCATGGCGTGTACTTCTGAATCAGATCACTCTAAGTCTAGAGACAT
GTATCCATATCGGAGGGGGAAATCATATCTTGGTCTACCATTTCACACAACATTTTTCAT
GACAAAGCCAAAAACTATGTATCTTTATGACTATCCGGTTATGGTGTAGAGTTTGATATT
CCTTATGTAATGACTGATTCACATTCCGAGAACATACAACAATCTCAGGTCTAGGACATG
ACATATACATTTTACCTGAAACTAACTTATGACAATTCGTAGTGCACCTTAAATGGGTCT
ATTTGACACGGAGTTCTATCAACACCAGTCCATATCATTGGATTGATATCTATATATCCA
TTACCTATAAAACATGGTCACCATCTCATAGATATGCTAACCTATTGGTATGTGTCTTGT
ATCTATATCGACTTGGGACCATATTAAGAAAATCATATAACATATTTTCATTAATAATAA
GTTACGTACTTTGCGACCTATATCATGATGGTATTCAAGAATAAAATAAAAGAAAGAAGT
GCATATATCAACCCAACTCTTGGGTGAGATCTAATATACAACCCTTGACTATTAAACCAT
CTAAGTTTATCGTGCCCTACTATTTAACCCCAACACTCACTCACTAGCTTGCAGCGCAAG
CAAAACCCAGTATATCTAGGTTTGATCCATTAAAGGCTCATTTCGGAATCGCCGTCTCAT
TCAGGGCTTGGGATGCGCAGATCTCTGTTTTCGAGGATGAGGCCCTGATCGATGGCGGCG
GCGCCAATCTGGCCCACGACAGCCTCCTTCTAGAGCGAGGCGGTGTGGCGGCTCGCCGGT
GACCCAGTGGTGGTCGTGGCGGCAGACTGATCTAGGGCGATCGTGGTGTCAGATCTGGAG
GTCCCCTTTCTCCTGCTACCTCCCTTGTCGTCCCGGTGGTTTGCGGCTGCAGCTCCGGTG
ATGGTGAGCCCTGGTGGTAGTGTACCTTGGGTCTAGGGGAAACCTTGACTGGTCTAGCCG
GCCCGATAGCGGCGTCGCCCATGGGTGCCGCTTTCCTCGTGAAGGCACAACTGAGGGCCA
AATTTACCCACCCCGATCTCCTGCCGGGTGAAAACCTTCAATACTCTTCGGATTTGGCCG
TAGCGGTGTTGTTCGCACCGTGACCTTCCTGGAGATGTCGTCGGGGACCTTGGGGCTCGG
TTGGGAGTACAAAGGATCTATAGATGGAGGGGATGAGACCAGTGGCTGCAGGTGGTGTTT
GCGAAGGAGGAGCGGTGTTGCATCTGACATGTCGAAAACGACGGATCTCAGCGGCATGGA
GCAGCGGGGTCTCATTGTTGGGCGTGTGTTGATGGACGAGCGCGGGAAGGTGGCATTGTC
TTGCGTCGTGGTGGCGTCGACGACAATTAGACCGGACAAGGTTGATGCGTCAGTACAACT
CTCAAGATGGATTGGTGGCAGGTGACGTTGGCGGCCTCTCTGTGTGTGCCAGACCAGTGG
GTGCCCCATACACCGTACTCGACAAGTGGCTTGGTTTGGGCTTCAGGTCTTAGATGTTCG
GCTTGGCTGCGAGGCATGTTTGGTATTAGGCCCTGACTATTAGGTCACTTCATCAACTGG
ATAGAAGTAGCGACAGAAGTTGTCTAGACGGTGGCTTCAGACTTACTATTGTATTACTTT
GTAAGATCTTTTGTGAATAATCAATAAAATGACTACATGCATTGTCTAGATGCACAGGCC
GGGGAGTCTTCCTCCCTTTCAAAAAAAAATCTAGGTCTGATCCCTGGCTTCTCCCTTTTT
CTTCTCCATTTCTGTTAAATGTGTGATAATGGGCCAGCTTGTTAGTGTGGATGCTTCAAG
CAAGAGCTCATTCCGTCTCACTATAAGCGATTTGTAACTCACGCGGCAGCCTGTCACACC
CATCAAAGGTGGGCTGTTCTATGGCAAAAGGCACACAAATCTGCCCACGCTCACGAATCT
TGATGTGCCTAAATCTAATGGTGGTACATGAGGAAAGTCAAAACTCTCCATTCAAGTTTC
TCCGATCCTAATTCTTTCCTTCTTGAGACCTGAGATATATCAGAAGTTTATGATTGGTAT
TTTCCAGTTGCAAGATTGTTAATCACCGGCCCCTCTCCCCTAGCCCCCGCTAGGGATCCT
CCCCCGCCTCCACCCCGTCGCCGCCGGTAACCCTCGCCCTTCGGCCACCGAGAGCGCTCG
ACTGGCGCCCCGTCCCCCCTCCCTTCTCCAGATCATGCCCTAGCATCGCCTCCCCAGAAG
GCGGCCGAGGCCGCCCGAGCTCCTCCCCCATCGGCCACATCCTCCTCCCTCCCCCCAGCC
GCCTCCCACGTGCGTCCCCGACCCTGGCCCGGGTGGTGTCGGTGGCGGCGGAATCTTCTT
TTCCTGCGCGTGCGCTTCCCCTTCCCGGGGCATGGGGCGGCCGCGGTGCAGTTCGGCTTG
GTGGCGGTCCGACGACCCGACGGCGGTGGTCGGCGACACGTGAGGTGGTGGCGCTGCTCT
TTGGTGGTGGGGGTGGCCGCCGGCGTGCCCCCGACCCAGATATGGGCCCTGCGGGCCCCA
TCCGTGTCCTAGCGGGTCGGCACATGACGCGGCTTTGATGTCCTCTGTGTGGTGAGGAGG
AGCAGCAGCTTGGACGGGGGGCATCGTCATCAACGGCATGCCTGTTACAGCGCGATGGCG
GGAGCTTCACGGACTTTGACGTCCCGATCGAGACTGTGGGCCCACGGGCCTGGTATGTCC
CTACTACTGCGTCCGGTCCGCTACCAACGTTGACGGTGGAGGTTGAGCCCTCCCGCGTGC
CGACGGTGCTGCTGTTCCTAGCCCCGACTCTTTTTCGTCATTGTGCAGGCCTCTCCTTTG
CGTTGCCGAGGTGAGTAGGGGCTTCAAGACTGTGTTGCGTAGGGTGGAGGTCGGTTTGGT
GGCAGGCTCCGGAGCACCCGAGGTGCATGTTCACTAGTAGAAAAAGGGCTTTTAGCCCCG
GTTCGGTTGGGCCNNTAGTCCCGGTTCTCGAACCGGGACTAATCAAC