Contig Data
morexGenes
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Map Locations of contig_136238 (5645 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_136238

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_5400 1 253 bp MLOC_5400.1 Available Available None
MLOC_5402 3 1318 bp AK355096 Available Available None
MLOC_5401 1 212 bp None Available Available None





CDS Structure of MLOC_5400






CDS Structure of MLOC_5402






CDS Structure of MLOC_5401






Contig Sequence (5645 bp)

>contig_136238 5645 assembly3_WGSMorex_rbca.fasta
TCCCCTGGATCAAATTTCCTCAAGAACTTAGAGGAAAAATCCTTCTTCATTGTCTCTTGA
ATCCCCACAAAATCAAGATTGAAGTCCCTAATTAAATCACTTAAGTAGGTTGCCATACCT
TTTTTTCCCATCCCCCTACAGTTCCAAAAGAGGCACATCATTTTTTTTTATTTTTAGGTG
AGTGAGTTTTATTGCTAGGTTGCTGGAATTTGCCATCCTTATGAGACTAAAATTGCCATC
GAACACCAGACTGGAGTGGCACGCACCTAACGTGTGACACTTATTATTTCAGATAACTTT
TGCAGCTATTGGATGTTAGACTGAATTCCTATGAAAGTAGTCTTTTTTTTTGTTTTTCAA
ATCACCCACGCCCCCAATGACCTTTGTAAAGAGGGGCTTCTGCTACTGTTCTTTGAATGA
GCATATTGTTTTGCACTAGTGCCTCTTGAAGCCAAAGGTACGTCAAGCATGCTTTTCCAA
ATCCATAACCAAACCCCTAATTTCTCATTCCATCCACTCATTTTCTCAAGTTCTTCAGCG
TCCCGGTGGTTCTGAGGTCAACCATGTGCGGGGATGAGTTGTCCTACTAAGCCAACACAA
TTCTTCCTGGTTAGCTATTTTTCATGTGCCTAATTTTTTTAAAGCGCGAGTCAGTTTTTT
CTTGTCCATCCCGTGCTCGCCGGAAAAGGAAGCACCTCGTCGGAGAAAAAATAGCCCCAC
TATCTATCTTAAGGGATGGGGTGTTGGGGATCGCCGGAGTTATGCAGCGGGGCTTAGAAA
GATGGTCGGAGCGATGGCCACCATGACGAGAGGAGGGCGAGGCGGCGATGGCCGCAGGGC
TGAGACAGACGAATAGGCATGGGTTGGCAGGCGGCTGCGTGAGAAGACAGAAGGAAGGTT
GGAAGAAGATGAAATGTGCCTTGATCTATCTTCAGCCGTTGGATGCTAATTGGATGGCGT
CGAAAGAAAATGACTAATGATGGATGCTTTTTCAGGCACCTGATCTACTTCCTCTGTACC
AAAATAATTATAGTTAGGAAGAACTAACTAGTTTTTTCCAACTACAATTATTTAAGGACG
GAGGAAGTATGTAGGCAATTCCCACTTATTCAAGTATTCTTGAGAACCGTCATAGATTGG
ATCATCGCCCTGTAAAAGAGGGCGAGGAGTAGGTGTGGGATCCTGGTTAAGACTATTGTT
TTAGGGAGGGATGCAGATTTAAATTGTTACTCAACCTGGCGATGGTTCGAAATTTCAATT
GCAACACTGAACATGGGTCATGTCATGGCTCTGACGCATGTGCGGAAGAAAGACAACTTT
GGCTTTGAGCGAGAAGAAATTTGATGCCGGATGTAAGTGTTCAACTACTAATTTTGGTTC
GGATTTGGTACATACGGTGGGAGAGGAGACGATTTTTCTATGGAAGGATATGCAGGTACC
AGCTCATTCGGTCATGTGGATTTATGCCTTAAGCGCAAACTATGTGAACGTCGGGAAGAA
GGATGTAGGTATCAAAAGGGAAGGATGGACCAAGCCCATGAAGGACAAGGATGCGGCGTT
TTGTTCAGAGACGCTCTAAGGTGCTATTGGTGCGGTCCTCAGAAACGAGAAAGGAAGTTT
CGTTGTATCACCAAATGAGAAGATCCATCATGTACTATATGTTGCAACCGCTGGAACTTA
TGCATTACAACACAACATATTACTCGCGAAACAACTTGGAATCAACAACTTGATGGTCGA
ATCGGATTGCATGAAGGTAATAGATACGATGAACAATGGTGGGTTCATGGCGTAGGGCGT
TGCGGCAATTTATGCGGATTGTAAGGTTTTAGTAATTATTTCATTTCAGTTTCCATTGTT
TAGCTAGGTATGTGGTCTCCATCTCACGTTTGATGTGGATTGAAGAGCCATCGGCATCAA
TTGTAAGAGCATGGTTTTTTTTGTGCGGGGTATTGTGAGAGCATAATAATACAGACAACA
ATCAATCAGCTATAAGGAGTTATCATGTCATCTAGAGCCAACCTAATAGACGATATGTAT
AATAATAAGTTTTAAATGTGTACTACTTTATTCAGTGTTTCGATCTTACAACCTCACAAA
ATGTCTTGAGGTTCGTGCTGCAGCTGACTGTTAAGCAAGAGCCCGCCTTCCTTCTTTCTC
ATCTTCTCTCTCCCTCAACTAAGGTGGATCGTGGACGGTGTAATAGTCTTTTGATTTATT
AAGTTACCAAAGTTTCAAAACATAAAGACGGTGGTGGCTTCTCAAAGCACATGTTTGTAG
TTTCCATCTCTTTTTATTGCCTAGTAAGTAGGACATTTTTGATCCATCTGTCAGTTTTTA
GTTGCTTCGCGGGATCTAACGATGGCAGATTTAAACAAAAAATAATATCTTTTAAAGGAA
TTGCCGTATTGTTTTGCAGAAGTTGCCATCCCCTCACGACTAAAACTGCTAACAAAATTA
TTTGAAATGCCATCCCCTTCCAGCGAACGTTTGCCGGCTAAGAGGGTCAAACAAAAGTTT
GTGCTATCCGAAAACAAGTACTTCATCCACAGCTCAAAAAGATAGAACTGCACGCACTCA
ATTGGCAACAAAAGTACGTGGTACATCTCACCAAGAAGCTGGTACAAAAATGGAAAAGAA
ATGAAAGAATCACAACGCAAGCATAGGTCATCTATTCTGACAGCTTTAGTAAGCCGACAG
GTATATGTCGACTGGCATCAACGGTTTTTCGTCGACATATACTCTTTTCCTGTAGTGACC
TATGATCATACCGGTCATCCCTATCGGTTCCGCGACCAGAGGCACGAGCATTTCCTCCCC
TCCCCCTTCTTCTAGAAGCAAGGATCAAGGATCCTCATTCCGCCTCCTATTCATCGTGCT
CAACGGAGCCACACTTTTCATGGCAGCGGCCTAGGAGACCTTACATATAGCACAAAACAG
GTAGTTTTTCGAACTTCACCTGACAAAATTATGTCTCACCAGAGCCACACTCTTCATGCC
AGTTGGCAAGGAGCCCCATTCCATATCTTCTTATTGCCTTGTAGGTGTGACACTTTTAAT
CCATGACATGACCTTGGCAAAAAAAAATGAAAAAAAAAAAATTCCGCTACACGGAAACAA
GGATAGAACTGTACATTCAATCGGCAACGAACGTGGTACACCCCACCAAGAAGCTATAAG
AAATGAAAGAATCACAATGCAAGCATCACCCTCCACGCAGGGAGGCCGGCTAGCTCGTAC
GTATTCCCTCCGTAAACTAATATAAAAGCGTTTAGATCGTTATTTTAGTTATCTAAACGC
TTCTATATTAGTTTACAGAGGAAGTACGTTGTCTCCTTGTCATTGCGTGATCTCGGCCAC
CGATATTCATCGTAGCTCAAAAAGATAGACCTGTACATTCAATCGGCAACGAACATGGTA
GACACCTCACCAAGAAGCTACAAGAAATGAAAGAATCACAACGCAAGCATCGCATGCCCT
CCACGCACGGAGGCCGGCTAGCTCTTAATTACGTTGTTGTTTCCGTGTCATCTGGTGATC
TCGGTCATCGATACCCGAGCAGCCGCCGCGAAGGCCGTGACGATGCCTCCCGCGACGTCC
TCTTCCTCCTCCTCCTCCGGCGAGGCTAACACCGTCGGCGGGGATAGCGGCGGCGGCGTG
TCGGTGGCCATCATCTCACCCTCGAGCGCGGCGCAGTAGGACGCGAAGCCGTCGGGCGTG
ACGTTGAGGCGGAACCGGAGCGCGAAGAGGAACTCGAGCTCGAGGCCGTTCATCTCCCGC
AGCTCCACCCCGCCCACCCGCGCGAAGTAGGCGTTGTTGTAGTGCCTGCAACATCCATTC
ACAACACCTCATTAGTCTTTCTTTCTTACATTGATGCACTGCAGATTGTGACCTAAGCAT
TGTATGATTAACTAGCTAGCGCAATTATATATACGGGCTGATCTAGCGTCGTCTTTGTAA
CATGGAGCTAGGCACATGTACATATGATTAGCTGTTAAGTGTGCTTGTTAAGCAGTAGTT
GGGGGAGAGACGAGCTGCTAGCAGCTAGCTAGTGGTGTTTGCTGGTGCTACGGTGATGAT
ATATATTTGTGAGTTTGGTGAGCCATCGAGTTCATGTGGGAGGGAGGGCAACGGCTGAGC
CACCAGCTGGACGGACGTCCCAACCGAACGTCCATCGACCATGCACCTACCGATGGTCCT
ATAATTTTGTTTGTACTAGTACTACCATATAAGAATACAAGATTACAACAACGAATGTTA
CTAGCGTTTGCGCGATGCGCTGGCCGCAATTTTTTACTCACCCATTTTGGATGGAACAAT
CAGTTGAAACACCTCATCGCCTGAATGAAGCGAACCTATTTTCTAACTGAACTGTTATTT
ATTGCTTTCCTAAAACACAATTAAATACTTACATAGTACTCTCTCTATAAACTAATATAG
AAACATTTCGATTACTAAAATAATGTTTTAAATGCTTTGATATTAGTTTTATTGTTCATC
GCATCAATGCGTGAACTTGGTTGAACCAAACAAAAAGGACGTGCAAAGCTACGCATCGTA
CGCATATCATCTGTACTGTGCATTTGATGTCATCTGGAATGAGACAAGAGGACTCCAGAT
GGCTGCTACCCGAGTCCAGTCCAGCTCGACCGGCACACTGTCGGCCAGAAAAATACACGA
CGGCTGTGCGCGATCCGCGTCGACCGGGTGAGTCGGACCACACAGGCAGGCAGGCTGGCC
GACACGTCAGACCCACATAACCGTCCCACGTGTCGGCCCGCACACCACACCGCGGCCCTG
CTCGGCACCGACATGGCGGGCGAACGTCTGACTGCCCCTGCCGACACACCCTCAGCTCCA
GCCAGCTCTACGCGCCGACAGCAGCACACTGCATGGGTAAGTGAGATGGTTGGTGAATCC
TGTCTAAACTGGACTCGTCCGATCTGAGCAAACAATAAGCTTCTCAATTTACTACTCCAC
TCCGTACGTAATGGGATGCGCGCATGCAGGTGCCGGGTCTCATGCCGGCTGGACGCACAT
GCCACGAAGATGCACCTGCAGATCAATCGATCCAAGCGCCGGCAGTAGGGCGCGGTTAAT
CGGCGGACGGTCAACTCCGCCGTGCGAGTTGTCGGAGTAGGCGCTCGCGCTCTAGTGCGT
CGTTTGTTGGTTCGAGAACTATGGAGGTGGTGCTATGGCTGGGGGAGGGGGGGTACGATT
ACGAACTCACATGTCGTCCATGAACTTGGCGGCGACCATGACGCTGGTGATGAGGAGGCG
GTGCACGCTGTACGAGTCCACGGCCACCGCCGCAGCGGCGTCCTCCTCCTCCGGCGACGG
CGAGGCGAGGCGGTCGAGGTAGGCGTAGGCGACCACGAAGCACGCCGGGCTGCACCCGGC
GTACCGGTATATGCGCTCCGCGTACCGCCGCACGCCGATCTCCGGCTTCTTCTCCGTCGG
GCCCCGGAACGCCGCCGAGCACGAGCGCGAGCCGTCGGCGACGGCGTCGCCGCGCTTGGC
GGCGCGCTCCAGCAGGCCGGCGAGGACCGCCACCACCCTCGGCGCGCCCCCACTGCTGCC
CGCACCCCCCTCCACCCCCATGGGCGGACGGGGGCGGGGGGGGGGTGGGCGGCTGCGGGC
GGCGG