Contig Data
morexGenes
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Map Locations of contig_136161 (5067 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_136161

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_5347 1 2181 bp AK359896 Available Available None
MLOC_5345 2 853 bp None Available Available None
MLOC_5346 1 478 bp MLOC_5346.1 Available Available None





CDS Structure of MLOC_5347






CDS Structure of MLOC_5345






CDS Structure of MLOC_5346






Contig Sequence (5067 bp)

>contig_136161 5067 assembly3_WGSMorex_rbca.fasta
AGTTGGCATGGATTGGACGGTGAAAGAGATGGTACCGGCCACCTGTTTCTTCTTTGCTTT
ACTTGCACGGTTGCACCACCGATTCCCTGAGCTTTCACTTTCGGCCCCTATGACGCTCCC
CTACTCAAGAGATCGGTCAACATTTGTGCCCGTTAAAGGCAGACAGGAAGACGCTCCTGC
CTCACCAAGGTAACTAGGTAAGCATGCTTCACTCTCTTCGATTCTTCGTTTTTCTTCTCC
TCGCTGCGATTTCTGGGTGTTCATTTGGAGAGCGATGCTTGCAGAAAGAGTGGTGCCTCT
CGGATGCGATGGTGCCATGGAGGATGGAGGCACGGCTGGCGGAGACGGTGCGGGCAGCGC
TCCTCAGCTGGCTCTTCTTCTGCATCACCATCGCCAGCGACGTCGCACGTGCGCTCAGAA
GCGGTGATCTCTCCATCTAGGCTCCATTCGACACGACTCCGCAACTACAAAGTCAGACTC
CATTGGGCGAACAGAGCAAGAAGATAGGTTTGCAGCAGGGTACATAAGAGTCCATCCATA
AGAGACGAGTTCGATGTAAATGTGAAATATTCATGTACTCCCTCCGATCCATATTAATTG
TAGCCCATTTAGTACAAGGCAGTAGCATACACGTGAAACCTTGTGTCAAACAGAGAAATA
GCTATTGCTCAAAGTGTGCTGACCTTCTAACAAAGATAGCATGGATAGCTAGTACACGAA
GGAACTAACATGGCTGGTGCGTCGGACCAACTGCGGGCAAAATTTCGATGAATACCTTTC
GCAAGGCGGAGCGGTATATACGGAATCTACTGGTCATGAGGCGGGAGCTTCCACCTATCT
GGACCCCGAGTGCTATCATCGCCTTGATGATTTCTTGAAAGACCTCGATTTCTGTCGGTG
ACCTCTTGGAGCCTCCTCTTCTTCATCATCTTCATCCTCCGCTGCCTTCCTCCTCTTCTT
GTGACCACCGTCCTCCTTCAGTTTCTGTCATATAGAAACAAAACGGTAACTTTAGTATCA
CCACAGCTGCCATAGCACTTATGGAGACCTCAAACTGATTGCTCCATCAAGTACGTACCG
TCAGTGCGATCCTCTTTGAATCAGATATATGCTCACGAAGTATCAGGATCTCATCCATAT
CTACCTTCCGGTCAGGAATTTGCCTACCTGTGAAAATAGGTGATGACTTTAGAAAGAAAT
CTTTCGTTATGTGTGCAACAAGACAAGCAACAAGGGAGATTATTACCAAGGAGCTGCTCA
ATCAGCTTAAACCACTCAGCCTCGTACTGATTCACAAAGGACACGGCATATCCCGATTGC
CCTGCACGAGCAGTCCTACCAACCCGATGTACATAATCCTGCATTTGGTGCAGTATAAGA
TTTTAAAATCAATGACAACATAAATGCATGACCTTTCTCAATAATAAAAGCAATATGCGA
TGATCGGCAACAGGTGCTGAAATATATCAGATAGAAAACCTTAGAATTCATTGGAATATC
ATAATTCATAACCACGTCAACTCCTTGAATGTCAAGACCACGACTCGCCACGTCAGTGCA
AATAAGGATGTTGAAATCCTTTGCTTTGAACTTGTTTAAAGCACCTAGTCTTTTGTCCTG
ATAAAGAGAACAAAAAAAATAACTATTTGCAGCGGGAAGCATTATTTATGTTAAGAAAAC
TAACATGTCCATAATGGATCTCACTTATACCACCTCAAAAGGCTGCCTAATTGAATGGGA
AAATCAAATACTTTCGTCTGTGTGATAGAAAAGTTACGAGAGTAAACCTGACTCATCTGG
CCACTGATAGAGAGAGCTTTAAAACCAAGATTCCTTAAAGTAAGAGCAAGGAGTCTTGTT
GACTCACAGGTCCGCACAAAGATCATGATCATGCTCCCTTGCAACTCATTCAGAACATGA
ACAAGATAACAATCCTGAAACCGAAGATGTCAAATGAAGAATAAAGGGAAATCAGTACTC
CATCCACTGTTGGTAAATAGAGAAATATAATATCAAGGCAGAAAAAGTATGTATGTAAAC
TCATCTCCTAAAGTCCAAGGGTATAAACATGAGCATTCTTTATCAGGATTGTTTATAAAA
TGCATAGGTGAATCTTAGTCCAAGGGTATCAACACAGGTTTATCAGTACTGCTAATATCA
AATGTATAGAAGTCCAGATTCTCAGTTCAAATTTCAAAGAAAATCCAAAGATATAATGCA
GGCCTGCAATTTATCACACAAGTTACATGGGCACAGAACCATTGGTCCTGATATTGAGAA
ACAGGAACGGAACTTGCCGCTTCTTAAATTTACATTATTACATTAAGAAGATCAAGAAAT
AACCTTGTAATCTGCAGGAACGAAATACCACTCTTGTTTAAGTGTGTCCACTGTAGAATA
TTTGGAGGATACTTCCACCTGGTCCCCAAAAAGTTACTCTTCTATTAGTAAGAGTAAGAA
GGCAGCCCAAAAGGCCTCTACTATTAGCATTTTGCTTCTTACTGAATGCCTAGAATAAAA
AGAAGAATAGATTTACCTTAACAGGGTTTCTGAGACAAGCACGTTGCAGTTTGCTTACCT
GCAAAGAAAACCCATAAGCTATTCTGCATTCAGGCAAACAAAAACGCATACGTAGCAAAG
CCATGAAGCACCAATTAGAAAAATAAGGCTATTCATGGCTAGAAATATCATTGCTGCAAC
TTGGAAGAGCATGTTCACGTAGTAGTCCTAGAAATACAAAGAGGTGCTGAGTTCAGCAGA
ATCAATGGTTATATGACAAAATGTCAATCTGTGCACTATTTCTCACCAAACAAAGTGGTA
AACAAGGCCACATCAATCTGACAAATACAATAATGGCAGGCTGTTGACATTTTAGTCCCT
TTGCTACACTGAATCAGAGAAATCATAACAAAACCTCTTGAATACCACCAACCTTTTTGG
TCATTGTGGCTGAGAAAAGGTAAGTCCTCCTTTCTTTAGGAATTTCCTTCAGAATATCAT
CAAGTGATTCCTTGAACTCCAAATTAAGTAATTTATCAGCTTCATCAAGTACCTAGAAAC
CAAGAACATTGACCACACGTCAAAATGAAAGCATTCAAGTTTAAACAAGTTCGTATAATT
GGTCCAAACTGTAGAGGTATGCACTAGTTATGTCAAGAAGTAGTTACAATGAAGGTTCCA
AACAATATAATCATCACATATTTATGATCAATCAGCACATTGCTAATTGGCAACAAAGAA
ACTATTAGAACAACCAGTCAAGCAAATGGAAAACAACTACCGATTCATTTATGTATTGCT
AGTTCATGACGCGCGCACTAGGGTGGTTCAGTTTAACAAAAGTAATTAAAATGATAACAT
ATCTTGTTATATTGGATTGTTAGCTTAACAATTCAGGGGAACACTGCCTGGAAAATGCAA
GTTTCCACTTTAACAGGCAAGATAGGTTTTGTGAGAAGCCACTTTTCTATATTGCACATT
ACTCCGTTCTGTAATGCAGGTTCTATCTGTAGCAACTAGATATGGTTTTTGACTGTTAGA
AATGAAAGTTCAACTTAACAGAATCATGTACCTGTCATCCAACAATCAGAATGGTCTAAT
TATAAGCATAAATGCAACAGCTGGATAATGTACGCATTAAAAGATGAGTATAATTCAAAG
AATACGTACCAAGTATTTCACTTTGGTTAGGCTAAAACCTTTTGTATCTTTCAAATGGTC
CAAAAGACGGCCAGGAGTTCCAACCTGCATTTCGGAGGAAATGATAAATAAAACAAGCTA
AGTCCTGATAAAGACAGTTTTCAAATGTCCCGGAAGAGAACAAAAGCTCTCTTTTTTTGC
TACTTGTGACTGGTGTATGCAATGGAAGATCCTGGCCTTAGCTTGTATACCCAAGTCCCG
TGTCTACTAGACTCTAGAAGCTACTTATATATGCTAAACTCAGTGAAATGGAGCATCTTG
GGTCTTATAAGGATACGCTTGTCATCACAATGGCTTTCAAAATTAAAAGCGCTTATATTA
CTCCCTCTATTTCCATATAGATATCCGTTAAAATACTTTTTCTAAAAACTTGGTAAAACT
TTGACTTACGACAAAATCTATAATTCTATATGCACTTTAACTTGGAATGGAGTATATTAA
CTTCAGGTACATTATCTATCAATAAACCCTCAAGAGCTTTCACAAATAGAGTTACTAGAA
ATGGTACCATAAGTTATAAAGGGGAGTTAAAAGGCTCGATAAGCTGTCTAATTGAAGAAG
CTTCAGGTTAGCCAAAAGGGCATTTCTTAAGGCCAAGAATTAGTATATGATAATGCTGAT
GCCAGAGCTTTTTTCCACTTTGGGATTTGAAGGAGTTGATGGTTGTGTGTGGATTTTAAT
CTACATGACTCACTTGCAATTTCAAAGCACAGAGAATACAGAACCTATATTGTACTTATT
AGGTTAGGATTGGGTAGAGGATACTCACCACAATATGTGGACGTTTTGCAATGGATAACA
CTTGCTGCATCCGGTCAACTCCTCCAACAAGCTGAAAAGGGGGAAATACCTTAAAACAGT
AACTCAATAGTCTCCTATTGTTGACGAATACTTGATTTAAGTAGGTTGTACCATGGTCAC
CAAGAGACATCTTAATGCAATAGAAGATAGAAAATTTCATCTAAGTATACTGAGCAGAAG
TAATCAGCGTGAAAGTGAAACACTGAAGCAGTCTTGCCGTTGTGGAGGAGAAAGGTCATC
AACAAACACTAAAATTGTCCTTATGGGCTCGTAAAGCGACAAACTTATTCAATTTAGTTA
TGATCTTTAAAAAAATATAGTAATAACTATGTTCCCCTATGCTTTGGCTTCACCAAAGTT
GAAATAGGCTACATATATTCAGAATTCAAAACAGCACCCTGACATTACTCCTCTTCATGT
TATGCGCGCAATACGATCAAAGGCAGGTAGCCAACAATTCACAGCCAGCTATTACAACAA
TTAGTTAATCAGACCTAGGATGCGCGCAAAGACACAAAGCATATTGCAGTATGCGCATCC
AATTGGTTGTAGCATATACTCCCTCCG