morexGenes - Barley RNA-seq Database

Contig contig_136101
Source Contig contig_136101
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_136101 (8370 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_136101

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_5287	2	2319 bp	MLOC_5287.1	Available	Available	LOC_Os12g25690.1, FRAME:-2, EVALUE:0.0, 13112.m02604 protein UDP-glucose 6-dehydrogenase, putative, expressed
CDS Structure of MLOC_5287

Contig Sequence (8370 bp)

>contig_136101 8370 assembly3_WGSMorex_rbca.fasta
GGGTGGGGGGTGGGGTGGGGTGGGGTAGGGTATCGCTTCCTTGAGTTCGTCGACCTGGGA
GAGAAAGAGGGAGAGGTGGGTCGATGGAGAGGGTTCTTTGCCTTTTCTTGCCATAGAGGT
AAGAAACTAGCGGTTTAGGGGAGGTGGTGGTTGCGTGGTGGGGTGTGGGCCAAGGCGAGG
GGGTGAGGGGGTGAAGGGGCCGACTTTGGCCAAGGTGTTGGTAGATGTCACGGCTCGGCC
TCGCGAAGGTGGGGATGGTAGGGGTCGTTCGGATCTATCCAACAAATCCGAATGTTAGGA
TTGTATTGTTGTCAAAAAATAATGAAAGCAAATACAGAGATATGTGAGGACGTAACACAC
ATGTGTGTAGATTTTCATGGCAAAATACGTTGAAATAAGAGTTGTGCAAGAAAGAAAAAT
ATGAATTTTTTTAACACATGATAGTATTCATCCTTTAATTTGTCTTTCCTATACATATAA
CATTTCAACGTTTTTCATTCTAAAATTTTACACACATATACTCCCTCCGTCCCAAAANNN
NNNNNNNNNNTTTATACTAGCTCTAGTATAAATTTATACTAAGCTCAAGACACTTATTTT
AGGACGGAGGGAGTACATAATATCCTTGTTTACTTGCATATTTTTTTAATATATTTTCTT
AAAACCGAAAAGTTTGAATTTTGATTTTTTTTTTCTAAAAAAAACTCCATGATGCTCAGC
CAAAAACAATTTCCACGCTGTTGGAGATGCTCAAGAGGGCGTGCTTTCGTGTGTGAACCT
GAGGTGGAGAAATGTGTCGTGCACACAAACACGTACGTACACGCCGGCGTCGGTGGGAAA
GAACTCGGACCCACCCACCTACGCGGACGCGGTCCAGGTCTAGTCGTCGACTGGCGCATG
CACGCCGCGTCCGTTGCACCACTTGGCGATCGACCTTGACCTGCACGACCCAGCACGTGC
CACCCCACCGCTGCGGATTGATTCCATCATCAAAGCTGTCCGACGCGATCACCGGCCGGC
ATGTTCGACGACTTTGCCGTGCGCGCCGGGCCGGAGCATCTGCGCGGCCGCGTCGATGCC
GGTTTGCTCGCCATGTGTAGTCCCCCGTGGCCTCTCTGTCTGCTGCTCCCCCGCAAAATA
TTCCGCGACAGACGAAACTGAACCCACTTTCCTGAGTCCTTCTCATTCAGTAACGATCAT
GTGAACAGCGGACTTAAAAGACGCTAATAAGCGGCACCCAACACACAGAGCAGATGATCA
ACTGGTCGAGTCCACAAGACAAGCTCGGCTTAAAAACACATTTGATTCTGTAACAATTTC
AGCAAAACAGTTGAGGAACCAACCGGCTACAAAGTTCATCGGATACAAAGGGGAAAAAAC
CTCCTCGGACAGCACAGGGGGCCGAGGAGTTTGATTATAAGATCTACAGACGCAAACATG
TATCGATCGAAAACTTAACAAGACACGAAGGTTTACTAAATTTTTATGCCCGGGCGAGGA
ACTGTTGTTGATGCTTCTCCTGCAAAACGCAAACTATAAAGAATGGATATGGTCAAACTC
AAACCACCGGCTCATCTTCCTTCCTTCCTTCCTTCCTTCCCCTGCCTTCCTGCAGCCCCG
ATCGACGACGCCGCCGGCAGACAGACGAGGCCGGCCGACGTGGAGAGCGAATTAGGCGAC
GGCGGGCATGTCCTTGAGCCACCCGTCGAGCGGCTTGCCGATGGAGTAGACGATGAAGCC
GATCTCCCTGAGCTTCTCGGCGTCGACGACGTTGCGGCCGTCGAAGACGAAGGCCGGCTT
CTGCATGTTGTCGAAGATCTTCTTGTAGTCCAGCGACTTGAACTCGTTCCACTCGGTGAG
GATGCACACGGCGTGGGCGCCCTTGGTGGCCTCGTACGCGTCCCACACCACGCTCACCTG
CTTCACGGCCGTGGGGCTCGTCGGCTGCAGGTGCATCGGGTGGTCCCAGTCGAACTTGTT
CATGGCCAGGTCGCGCTGGATCTGGTCCTCCGTCACCTGCGGGTCGTAGATGCTCACCTG
GGCCTTGTCGCCCAGCAGGCCCTTGCACACGTCGATGGCCGGGGTCTCCCGGGTGTCGCC
GGTATCCTTCTTGAAGGCGAACCCGAGCACGGCGATCTTCTTGCCGGACACGGTGTTGAA
CATGGACGACACCACGCGGTTCACGAACCGGCTCTTCTGGTAGTCGTTGATCTTGATCAC
CTGCTTCCAGTAGTTGGCCACCTCCGGCAGGCCGTTGCACTCGCAGATGTACACCAGGTT
CAGGATGTCCTTCTGGAAGCACGACCCGCCGAACCCGACGCTGGCGTTCAGGAACTTGGG
ACCGATCCTCGAGTCCTTGCCGATGGCGTACGACACCTCCGACACGTTGGCGCCCGTGGC
CTCGCACAGCGCCGACATGGCGTTCACGGACGAGATCCTCTGGGCCAGGAAGGCGTTGGC
GGCGAGCTTGGAGAGCTCGGCAGACCACAGGTTGGTGGTGATGATGTTCTCCTCGGGCAC
CCAGTGGGCGTACACCGACTTGAGAGCCTCGACGGCCTTCCTGCCCTCGGGGGTCTCCCG
GCCACCGATGAGCACTCTGTCGGGCTTGAACAGGTCGTCGATCGCAGTGCCCTCGGCGAG
GAACTCCGGGTTGGACAGGATCTGGTAGTTGATGCCCTTGCTGTTGTGGGTCAGGATCTT
CTCAATGGCCTCTGCGGTCTTGACGGGGACGGTGGACTTCTCGACGACGATCTTATCCGA
CTTGGACACATCGGCGATCATCCGGGCGGCGCTCTCCCAGTAGGTGAGGTCGGCAGCCTT
GCCGGCTCCCAGACCACGGGTCTTGGTGGGGGTGTTGACGGAGACGAAGATGATGTCGGC
CTCGGCGACATGCTTCTCAACATCAGTGCTGAAGAAGAGGTTCTTGCCCCTGCAGGCCTT
GACAACATCATCGAGGCCAGGCTCGTAGATCGGGAGGGTGTCGCTGTTCCAGGCGTCAAT
GCGGGGCTTGGAGATGTCGACGACCACCACCTCAATTGCTGGGCACTTGATGGCAATGAC
AGCCATTGTTGGGCCGCCGACGTAGCCAGCACCGATGCAGCAGATCTTCACCATCTTGGC
TGCTTACAACCTGTGATGACAGCAAAGAATTGTTTTCAGAGGATTGAAAAACAGGGCATC
TAACTAATTTCACTGCACATCTCAGACTCAGAGTAAACAGAAGCAATCAAGATTCAGATC
CTTAAAGAGAAAGTATGTGACAGAAATGTTCATAGTTGAAGCTACAGAAATGTTCTAAGA
AATCTTCTATCCAACTAATCCGGCAAATAAGCATGAACAGTTATGAGTAACAGCATGAAC
ATCACAGCATGATCTAACTTTAGGTGAAAACGCGGTGCCTACTACTTCCGCAGACTGCAT
ACAAGGAGCATGACAGACTGAACGGAGATCACACCAATCACCCGATCCACCGGCAGCGGC
AACAGCCAGCAGGCCAAATGAAAAATTCACAGCACGGAGCACTACTACCCAAACCACTAA
CTAAATCAAGACAATGAATCTGAATCGAACACTCGGCCAGATCTGAAGACAGCAAGCACC
TTCAGAGAAACCGAGAAAAGCACAACAGCCACAGCATGAAAACCATGCTCCTCGCAAAGA
TCAGGCACCAAAGCTACAGACTAAAACCGAAGGAGACGCTAACCAGATCAGGGGAAACTC
TCACCAGATCTCAGCAACTCGGAGAAGATCTCGAGAGGAGAGGAGGGGCGCGCACTGCTG
GAGGAAAGCAACGGAGGCGACTTCTTGGTATGCAGAGAAGAAGCTGCTGCCCACGAGTTG
TATGCAGAGAGGGGGCTGCAACTCCTTATATACCCCTTTCAACCAAGCCACCAGGTTGGA
TCTACCCTGCTCTGGAAAATTAACCGCGTGAGGAAGGCCGGTCAGAAACCGGAATAAAAT
TTGAGTAGGTGTGAGTTGGTCTTGCAAGGCAAAGTGCCGCTCTCATGCCATCCATGAGCC
CACCAGACTTGCGTTGATGGAAAAGGTTTCAGATGAGTCCATGACACACCACCAACCTCC
TCACTCTAAACCAATCAGAGAGAAAAATCTAAACCAATCAGAGAGAAAAATATAGGAAAA
ATACCAGAGGTGTTAGAGAATAAATAAATAGCGTGTGATCAGATCTGAAGGTTCGGACCC
TTTTCTTCATGTTATCTCTTGTTCAGTGTATGTATACATGCTACAAAAATACGGCCGGAG
TGGCTGTGTACTCGTACCCCATGAACATGAACGAGGACATGGATGGTGTGGAGGAATAAT
TGGGGGCAAGCGACATTAAGTATTTTAGTCGATGGTCAACTATGGCAGCGGCAGAGTAAT
TTTGAGGACAAAATCACCTAGGATGCAGAAGTTACAGTGTTTGGTTGAGATGTAAGAAGT
GCCAAGCTATGTCCAACCACTGGGAGCATGCGATGGAAACCTTCAAAGCCCAGACACGGT
CAAAATCAGGAACCTGATGTTGGTGCCGTTGCTTGTCCCAACGATACTCTACTAATCAAA
ACATGTGTATAATAAACCACTTGCAATTTTTACTGATTAAAAACACAGCGGCTGAACCTT
CCACGTGAAAGCTCCAGCATACATGACAGTACTCAGAATTAGACTCTGAATATAACCTAT
TTTCAAGAGAAGAAAGAGCGCAACCACGAAAAATACAGAATTGTCATGGTCCTACTCTTA
AGTCACCGTCATCTGATTTTATTTTCTTTTGCAACAACAAGTCACTGTCAGCTGATTGCT
ATAACTAATAATAGACTAAGGAAGACTCCATCTTTCTTCCGACTTTAAGGCATCGTTTAG
GAAAGACACTGAACGTCAGGGCACTTGTTTACACGGTCCAAGGTCAAGGGTTGTCACATG
CTCTAGCTAGCAAGTCAACAAAAATCAGAACTTCCTCTTCTTATAAGTCAAATTTCTCAA
GCACTGCAATGCATTATTTATGCACATCACATGAAAGAAACATATATATTCAAGCCATCA
TCAAAATACAAATCACAAGAAAGAAAACCGTAACATTATGAGTATGAGTTCCTTCAAGGT
CAAGAAAGTCATAAGAAAACAAACAAAACAAACCATGATTAAAAGAACCTCCACTTCGGC
TACCAACATCAGCAGCAATCACAACAACAAAATAAGGAGGGCCTCCCTCTAGAGTCGGAG
ACATTTTAACAAACACCGGATCTGCATCTCAAGCCAGCCCCCTAACCATAATCTAATAAT
GTAAGCAGCAGATCCACCGACATCGGAGCCACGGGCCGCCACCACCATCCCACACCCGAT
TCGGTTGGAACGAACGTACAGAGGCAACCAACGGGAGGAAAAGGCTGGTGGTGATCCGGC
TTTGAGTGAGGCTCAAGCGAGCGCAATAAACCCCTCTAGTCTAGTACTGACTGGTAGACT
TGTGCACCGGAAAAATTAGCGATCCGGTGGTGTCCAGGCGTCCCGAGCACGCAAAGAGGA
CAGCGACGAGTGCGTTACCTTCAACCCCGGGCGGCTCTGCTCTGCTTTGTTTGGAGTTTT
TCTAGGAGTATACCGCAGCAGTGATAATTCGAAAAAAAAAAATCGACAATTTTTTTACGG
TTTTTTTCTTCTTCAGGGAAGCGTGTTTGCCGAAAATGCAGTGTCGGTTTTCTTTCAGCC
ATGACACAGCGGTGCACAGTAAGACGTACTCCTATAATGTTCAGCTTGATAGTGCACCGG
CCCGCAGCCCAACTTTAATGAGCTGGCGAGCCCGTTGCACTGTCGCAGTCTGCTCTCTGA
ACCTTAACACGGACCTACGTACCTACGTACGTGTCCAAACTATGAAAATGTCGACTCCTA
CCGAACTGCGACTGCATCGTGAGAGTCCATGCGATCCTACTTGCCTAAAGTTTGACCCCC
CCAGCCCCGCCGCGATCGGAGCCGCGAATGGCTGCAGCAGGGGGGCATCTCGTCAAGGTT
TGGGAGACACACGCAGCTGTCGTGTGGTTTTCGCAAGTCAATTGCGCTTGAATTGGAGTC
GTGATGGTTTGGTTTGGCAGAGTTTGGAGGGGTGCCAACTAGGCTGAAAGTAACGGCGTA
GTTAGGCGAGGATGAATGCCCACCTTGTGGACGGAAGAAGAGCAGAGGTGAATGTCATGC
ACCGCCAAATGCCCTAGTTATATCTACCTCATGGCACTGACGACGATGATTATCGCCAGC
ACGCTCGGTTTCTAAAATGGCGTGTGTCTCCTTTCCTTTGGGCTACGTGCGGGCATGTGG
GCACCCGTGCTCACCTACCATACCAGTCACAGTCGGGGTAGTGAGAAAATCATTGTTTTG
GCGCCAAAAAGCGTAGTAGGTTCTTTCTTTTCCCCCTCGTGCTCCATTGGAGCGGCAACG
GCAATTAGTTGCACCGACAGAGATGTCGTCGTCCCTATCTTGCTGCTATCCGATTATCAT
CAACGTTTTCTTCCACGCTTCCGCTCTGTTATAGTTGAGGCATTAGGTTTGTTTTGCACC
AGGCCAGCTGAAGACAAAGCGTTACCCAATCTTTTGTATTGACACTAGTTGTCCTAGCAC
TGGTAATGGTAGCGACGTCAATCAGTTGGCCGATCCGCGTACGCGTACGCGTACTACGGG
TGCGGTGCGGGACGGGTGGAGTGCAATATCGGCACGAGTTTTTGGTTAGGGAGGTCAGCA
GAGGCCGACGTACCACGTACGTACGGACGGACAGACAGACGGGGCCACCGGGCGGAAGCT
GCCGCGGCCGCACCGGCGCCGGGAAAACTCCAGCCCACCGGTCGCGCCCGGCCAGCCAGC
CGATGACCCGAGCCCGCCGGTTCGGGCCGCGTCGACGGCGTCGTCTCTTTCTCTTTCTCC
CGTGGGACGCGCGGGGACAAAAGCGGTGGACCTGTAGTCCGGCTGGTTCTCCAGTGAGCT
GGAAGGGGTGGAGGCAGGCAGCGGTAACATGGGATTGGGATGGGCTGCGGGAATCTTCCG
GGCCCAACGGGATTTGACTTTCGCCGACGTGCGTCAGCGACTCCACACGTCTTTGCGTTT
CTGTATGTGACTATGTGTGTACGCGCTTGCGACGCACCTTCCCTCCCTCGCGTCGCGTGG
GCGGCCGCGGTGCGCACCGACTGGCCGACACGACACCACCGACGACTCGGGTGTCTCTTG
TCCTTGTGCCTGCCTGCTGTTGGCCGCGCCGATGCTAGGGTCGGGACAGCCGCGTCGGCC
GGCATCCCGGCACCATGTTTTCCGATTCTCCCATCCAATCTGGTTAGGCTAACTCCACGG
CACGATCCCAAACGTCCGGTATGGTCGGATTTTATCCGTTTAAGACGGCAATGGATTCGT
TCATGTTCGCCTTTGTTCGTTGGATCGTGCATGCGTTCATCGCGCGACCGCACCCCAAAT
CATATTCATGTTGGACTTGATTCAAAAAAACTTAACTAAAAATAAATAAACTCATTTTAA
AAGCTTAAAACATGATTAACATTAATAAAGGTCCAGTTTTAACGGCCACAAAACGGTCCA
GTTTTTGACATAATTAACATAAAAAAATAGCCCGCCCGTCGTTGCCGTCGCCGTCGCCAT
CGCCGTCTTCACTAGTCGCCGATGTCGTCGCCGTCACCGTCTTCACTAGTCGTCGGTGTC
GTCGTCGCCGTTGCTGACGAGGTCGACGTAGGGCGGCGGCGTCCAGAGGTGGGCCGACGG
TCCCTGATGCGCGGGGCGTGCTAGAAGCTGGCCTGCAGCACCTCCTCCCGTGGCGAGGCA
TCCCGCTCCGATGACCACGCGCGGCGTGGGGTACCAGTTCACAGCCCCCACTGCCTGCGC
CATCTCCGACGCGGTGCACGACCAGCCCCACGACGCGCCAACCAGCTCCGGCAGAACGCG
GCCACCTCCTCCTCCTCCATCGGTTCAGGGATGGCGACGTCGCCGGCCGCAGAGAGGGCC
ATGGCGCGGTCCAGGCCCGGCCATTGGCGCCCATCATGCGTTGTCATGGAGAACTCCATG
ACGCGCTGCATGAGCCGGGCCTCCTCCTCCTCTGTCATGCGCGGAGGTGGAGGTGGTGAC
GGAGACGGTGAAGGCGATGCCATGGACGTGAGGCCGCGCACCCGTGTACGCCCCCGCACC
TCCCGTGCCCGCCGCGGCCCCGCGACCGTCCCGACGAAGTACGAGGCACGACGCACGTCG
TGCTCATCCCTGAAGCCATGCGTCCCAGAGAGTGTTGTCGGCGGTGTACCTTGGGTCGTA
GTAGAGGTTGTCGGGGAGGAGGCGGCGACGGCGATCGATCTCCTCGCGAGCGCACGGCCG
CTCGTCGGCACCGGAGGGATGGGGACGCGG