Contig Data
morexGenes
Links



Map Locations of contig_136007 (4454 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_136007

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_5205 1 2109 bp MLOC_5205.1 Available Available LOC_Os12g24140.1, FRAME:+1, EVALUE:1e-122, 13112.m02455 protein cyclin-dependent kinase G-2, putative





CDS Structure of MLOC_5205






Contig Sequence (4454 bp)

>contig_136007 4454 assembly3_WGSMorex_rbca.fasta
AGGGTTGGAGCCCCTCGGCCGCCCGCGCGGGGGGTAGCGGAGGGGAGGAGAAAGGCGTGG
GATGATATTATTATTGTGATGATACCAAAAGTTAACTCATGGGAGTTACTCTATTAGTTT
TGTTGTTTTAGTCTATGTAATGTAATATATAAGATTGCCGCAAAAGTTTTCGCAGATAAA
CTAAAGATGGTGTTGCCTATTTTGATTTCAGAAGAACAAAGTGCTTTTGTCCTGGGCAGG
CTAATAACGGATAACGTCTTGATGGCGTACGAGTGTGTTCATGCTATTAGGAAAAGGAAT
AGAAAGAAGCATATGTGTGAAGTGAAATTAGATATGATGAAGGCATATGACAAAGTGGAA
TGACAGTTTTTAAGGCATATGATGGAAATAATTGGTTTCTCTGGATCATGGTTAGAGATG
GTTATGCGATGTGTCACTTCAACACGATTCCAGGTAAAGATGAATGATGGTCTATCACAT
AGCTTTGCTTCGTCTAGAGGATTACCACAAGGAGACCCGTTGTCCCCATATCTCTTCTTG
TTCTCTGTGGAGGGGTTTGTAGCATTGTTGAGGGAAGCTCAAGCGGTGAAGGAGATTAAG
GGTGTCTCGTTTGGGAGCACTGACCCCACTGTGACACACTTTCTCTTTACAGATGATAGT
GTGGTGTTCCTGGAGGGTTCCAATGCGAATTTTGAAAGGTTGCGTACGATCCCACAGGAT
TACGAGGCCGCCTCAAGGCAAAAGGTGAATCTGCAAAAATCTTTTCTTTGGAAATGACAT
CACTGAGTATGGTGGAAACAATGGGTATTGCTTCTGAGGCCTTGAGTGAAAGTTACTTGG
GACTTCCGGCAATGGTTGGGAAATCAAAGGATGGAACCTTCAAGTATGTCACAGAGATTG
GTCAGGAATGGGTTAGCGGTTGGTTCAGAGCTTCATAGGAGGAGAATTAAGGCCGGGTTT
TTTCTGCATTGTATGTGGCCGAAAATAGACGAACTACCATAGGTTCTGGGGATGCTGTCA
TTTAGCTAAATTTTGGAAGATTTTGCACTCGGAAGTGGGAGTTCCGGTGGCGATCCCGCC
GGTTATAGCTAGCTCTCAGAGTGATCTTTCCAATTGGATCCTGTCATGGATTATGGATGC
CTCAGATGATGAGAAGGCGATTATAATGCAGGTGGTCTATGGCTTGTAGCTGGCCAGGAA
TAATGCAAGGGATGGGAAAATAATTGATGAAATGGAGGCTATTGTACATGCGACTGAAAG
CAATGGAAATCATGATGGTGCAACTTCAAAATCAGGAGGGAAGGGTGGTGCTGGTGTGGT
GTTCAGAAATCATGAGGGAGCTTTTTTTGGAGGAGCGTGACACTATTTCCCCGAGGGTAA
GGATGCAACAATGGAGTTACAAGCTCGCTGACAGGCATCACAACTTGCAGATGAAGTGAA
TGTAAGTAAACTGCACATCGAGATGGATAGCAAAGATATTGTCAGTAAGCTCCAAAGCAA
AGACAGAGACCTCTCGGTGCTGGGACCTCTGATTGAGGAAGTGAAAATGTTATTGGAGAC
ACGACGACAATGAAAGGTGAGCTGAGTTCAAAGATCGGCAAATAATGCAGCACATTTGCT
AGCTAATGAAGGTGTTTCTTCTAGTTTATGTAAGGAGTGGTTGTATGAACCTTCAAAACT
ATTCTGCATACTCTTTGGGCAGAGATTCCTGCCTTTTTATGAATAAATAGGAGATGACTT
AATTTCAAATAATAATAATTTATTACTGAATAATAAAAACCACAATTTGACCTTGGGTGT
ATATTAATATAATTATTATTCAATCTATTATTACTGATATAGCTTAAAAATTATTATTAT
CAAAAAAAAGGTTGAAAACCAGGAATAGATGTATACATTCATCTTTATTAATTATTCAAC
AAGTGTAAAACCGGAATATATAGGAAACAACCTAAAGCCATCACTCGTACCAAAAACTTG
ATAATGTGGAATGCATTTACTCCCCACCATCTAGATCCTGGGTAGCCGTCAATCCGCTTG
CATAACGTATCAGGATCCTACAGCCGGCACAACGAATTTAAAGTGTACACCACATTTACA
TACACATGTTTTAGAAATCGCATCACCACTGAACCGATGATCCATCTCTAGGAAAGAGAT
ATGAATTATCTTTATCAGGACGGCCATCCGTCGACGCCGCTATGACGTCAAACAGCCCCA
TCGCCCCACGCCGTTGCAAATGTTTTTGCAACATATGTATGTTACAAAGAAGGATTCTAC
AACAATGTCTTCGTTGCAATGATGAGAAAAAAAAATCCATGCCGCTGCATAACGCTGATC
GACTGTTGAGGGGACGGATCTTTTAAATGGATCAACCGGCCGACGTCGTAGCAGCGAACA
CGAGCCCAGACGGTCCCTGTCAGTCCGAGTTTGAATAGAATTCCACCACTGAATCGTATC
CGTGTAATGCGGTAATGCGCGTCTTGTGCGTCCGTCTATATATACATTGGCATACGCATA
CGCATGCGGCTTGTGAGATCAGAAAGCAGAACCAATCCCTACCTCCCTCCGTCTAGCAGC
TAGCAAGCAGCTTCTAGTCGCCGATCTGCACCAGTTTTCTCGCCGAAACATGGGATGGTC
GACGTCAACATCGCCGGGCGTGGCCGCCCTAGAAAACGCGGCCACGGCCACACCGGCAGC
GCGCAAGAATCAAGGAACACCGGCCGCAAACGGCGACTCCAACTCCCCAACACGCAGCCG
CTACCACCGGCTGGAGGTGCTCGGCGCCGGAACCTACGGCGTCGTCTACCGCGCTAGGGA
CCGCCGCACGGGAGAGATCGTGGCGATGAAGTGCCTCCGGACGAACGGCGCTCACGGCGG
CGACGTCGACCGCTACCTCTCCGACTTGGCGAGCGAGGTCGGCGCCCTCGATGCCTGCAG
CGGCCACCCGTCCATCGTGCAGCCGCGCGCCTCCGGCCACCTCGGCGGCGAGGCCTTCCT
CGCCATGGAGTTCGTGGGGCCGACTCTCAGGCATGTCATGAAGCATGTCCGCTTCGGCAG
GAGGCACACCGAGCTGGAGGTCCGCCTGCTCATGAGGCAGCTTCTCGCCGGCGTGCGGAG
GATGAATCGTCTCGGCCTCATGCACCGCGACCTCAAGCCGGAGAACGTGCTCGTCGACGG
CCATGGGAACCTCAAGATCTGCGACCTGGGGCTGTCGTGCAGCATGGCCGATGGGCCGCC
CTACTCCAACCCCGTCGGCACACGGGGATACCGCGCGCCGGAGATCCTCCTCGGATGCAC
CGATTATGACGAGCATGTCGACTCGTGGGCTCTCGGGGTCATGATGGCCGAGCTCCTCGC
CGGCAAGCACCCTTTCCATGGGAGGTCAGACACGGAGCACCTCAGCGAAATCTTGGACCT
TCTTGGCATGGCTGACATGAAGGAGTGGTCGGGCTACGACGGGAGGCGGCTACCCGGCGG
ATGCCAACCAGGAAGCTTTCTGCGCAACAAGTTCCCATGTCCAGCTGAGGCCAGGATCAA
AGGCCCGCCGGCGTTGTCGGAGGCTGGTTTCGAGGTCTTGAGCGGCCTCTTGCGATGCAA
CCCCGAGAAGAGGCTCACGGCGGAGCAAGCACTCAAGCATCGATGGTTCAAGGAAACCAA
CCCGAGACCGAGAGATACAAGCAGGAGGTGATCAATGAGAGTACACAATCTAGTCTACAA
CGGCATCGGATTCATGTAAACTAGAGATGCAAACATTGTAGTATGTGATTTGAACGAATG
AGTACATGTATATGAGGTGTGAGATAAAGAAGCAGAAATTGTTCATGTGGATCACCATTT
TTAGTGTGGTTTCTTGCTCTTTGTTGTTCAAGGCACTTTGATGCTTCCAGATATTGATGC
TTGTCGTGGATCAATAAAATGTAAATTATGCCAAACACAAATTCCTGCCATATTTACTTG
TCTGGTTTTCTGCAACACACAGACGCATTATTTCGTTCACACCGTAATGGCTAATGGCAT
GGCAGGGCCAGCCAAACAGATCGACTATCAGACGTACCCGCCGTTGACACGGACGACCTG
CCCGTTGACCCACTCGGCGGCGTCGGTGCAGAGGAAGCCGACCACCGGCGCTATGTCGCC
GGCCTCCCCGAGCCGCTCCATGGGGTTCGTCTCCGCGGTCCGCCTCACGGTCTCGTCGCT
CTTCCCGGCGAAGAACATGTCGGTGGCCGTGGCCCCCGGAGCCACGCAGTTGGCCGTCAC
GCGCGTGCCCTTGAGCTCCTTGGCCATCGTCCGCACCATCGCCTCCACGGCCGCCTTGGA
CGCCGTGTAAGCGGAGTACCCCGTCGGCGACGACGCGACCACGGACGACGTCACGGCCAC
GATCCGGCCGCCGCCGCCGCGGGGCAGGCGGTTGGCGGCCTCGCGGAGGCAGGGGGAGGC
GGCGGGGCGGCGCG