| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_135957
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_5173 |
5 |
2637 bp |
MLOC_5173.1 |
Available |
Available |
LOC_Os05g50380.2, FRAME:+2, EVALUE:0.0, 13105.m05403 protein glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed |
CDS Structure of MLOC_5173
Contig Sequence (7864 bp)
>contig_135957 7864 assembly3_WGSMorex_rbca.fasta
TCTCTCTCATCCAACTCAGCAAAAATATATTATCTTAATCCTTACAGCCTGCTGACTGTA
CCTTATTGTACTTGCTCTCACACCGGTGATTCAGGTCCTCCCTTTTTCGATCCGAGTGTT
TCTTTTGCCTTCCCAACGACAAAAATGTGAGTCCTCCTTGGATCCTGCGCGCCCTGCCTG
CTCAACTCCTTCAAATATTTCGGCGTCAACCAGCTCGTTTTCATCATCACCTCTCCTTAT
TCAAATCATTTCCCGTGTCAAGTAGCTCCCGTCAATGAAACTATGCACTGCATCACACTT
GAAATCCGTGTGCAAGCCTCCGTTTCCACTTGCAAAGTTCATCAGGTATATTCTGCCTTG
CGTCCCTTTGAGTTCAGAAGAGGAGGGAACAGCAAAGGAAGAACACCAGCCACAAGATGA
GAGGATCATCTCATCTCCTGATTCACGTGCCGACTCTCTCCTCAAGGCTGAAAAGTCACA
AAGTCCTTGGCACCTTTCCCACTCTTCCACTAGTCCTTTTTTCCAATAATCATTGTTCTA
CGCCACTCAACCTTTTTACAGACGCCCGTGACCCATGAAAGAGGAGGGGGAAAAAGTCCG
TGCTCTTTCTGCTCGATCGTGCGACTTCTTCAGTGATTTGGGGACAAACTCACCTGCCTT
CCGTTCTCCAATCTGGTCTAGCCAGTAAACGGATTTCTCAAGATTCCATGCTTGCTAATG
GTTCTCAACTTCTCATCTTGTTGCAGTTGCAGGTGGACTGCTAATGTCATCGATGCAGTT
CAGCAGCGTGCTGCCCCTGGAGGGCAAGGCGTGCGTTTCCCCAGTCAGGAGAGAGGGATC
GGCCTGCGAGCGCCTCAAGATCGGGGACAGCAGCAGCATCAGGCACGAGAGAGCGTCCAG
GAGGATGTGCAACGGCGGCGCCAGGGGCCCCGCCGCCACCGGTGCGCAGTGCGTGCTCAC
CTCCGACGCCAGCCCGGCCGACACCCTTGTGAGTTTCAAACTTTCCATCCCATCCCAGAC
AGATCATGTTCGGGTTGCAGTGGAGCATATGTGTATGTTAGTGTCTCTGATGTTTTGATG
CAAAATAAAAACACCTGTAGGTTCTCCGGACGTCCTTCCGGAGGAATTACGCCGATCCGA
ACGAGGTCGCGGCCGTCATACTCGGCGGCGGCACCGGGACTCAGCTCTTCCCGCTCACAA
GCACAAGGGCCACACCTGCTGTAAGATGGCACATTCATCATCCACTTCTATAGTTATAAC
TTTCTACGTTTATCCAGTTTCAAGTTGGTACATTTCAATTGCAGAAATGAATAAATAAAA
CTGTCATTTGCAGATATGTTTGTACTCCCTACTACTAGATAATTTCCCAGTTTTAGATAG
ATAAGAATGAGGAAGCTTTATTTAAATTTCAGTTCTTATCTGCACATGTTAATTGATTTG
GATAGGACCAGTTGAAGTACAGCTCATTCAGTAGCAAGGTTTCTGCATCGTGATCAAGTT
AAATCATTATTAGCAGCAGTGGTTTCTGTAGCCGGTCCCGATGATGCCCCCCACTTTAAC
CGACATGATGTCAACCTCAAGGCTATCAGTGACCATCCATGTAGCTTGTCCAGTCATCTT
CGGATCGCCAGCCTGAATCTTGTTCCTTTCCCTTTGTTGCATTGCTCAGGTTCCTATTGG
AGGATGTTACAGGCTCATCGATATTCCCATGAGCAACTGCTTCAACAGTGGCATCAACAA
GATATTCGTCATGACCCAGTTCAACTCGGCATCTCTCAATCGCCACATTCACCGCACCTA
CCTCGGCGGGGGAATCAATTTCACTGATGGATCTGTTGAGGTAATTGACCTCAACTTAAT
GTTGATTTATACTTTAACTTTTCTTCTGATTTTCATGTTGACGTCTTGGGCTTTTAGCCA
ACTACAGCACACGTTGACTGAGACACCTTTTTTGCAACAAATAGGTATTGGCCGCGACAC
AAATGCCTGGGGAGGCTGCTGGATGGTTCCGCGGAACAGCGGATGCCGTCAGAAAATTTA
TCTGGGTGCTTGAGGTGAGAAGAGTATCTAGGAGCACATGGCCCTCCTTGCACCTCATAC
TTGTACGATCTGCATGTGTTAAAGTAATGCTTGTTGTGTTCTGTGTACCTCTGCAGGACT
ACTATAAGCATAAATCCATAGAGCACATTTTGATCTTGTCGGGCGATCAGCTTTATCGCA
TGGATTACATGGAGCTTGTGCAGGTTTGTGATGTTCTCTTTAACCAGCTCTAGTGTATGT
TCTGTTTTGAACTGGCTGACCAAGCTGTGTCATACATCCTTTACAGAAACATGTGGATGA
CAATGCTGACATTACTTTATCATGTGCCCCTGTTGGAGAGAGGTATTAACTAATGTTCTA
CATCCCAGATCCCTGTTTATGAATGTATATTCCTTTTGGTGAAGTTACGCTGCATCCTGA
TCTGCTTTTCTTTGTTTTGGAAGCCGGGCATCTGAGTACGGGCTAGTGAAGTTCGACAGT
TCAGGCCGTGTGATCCAGTTTTCTGAGAAGCCAAAGGGCGACGATCTGGAAGCGATGGTT
AGCGCTCGTCTTTGCTCACTGTGTCAGATATATGCCTAAAGATATAAGTATCTTAAATAA
GTTGCAGTATCTGAGATTTAAGTCATTGATCATTGCAGAAAGTGGATACCAGTTTTCTCA
ATTTCGCCATAGACGACCCTGCTAAATATCCATACATTGCTTCGATGGGAGTTTATGTCT
TCAAGAGAGATGTTCTGCTGAACCTTCTAAAGTAAGAACCTGCACTTGTGACGATGCGGT
TCTCCTGTCAGCCTGAATTCTAACGTTGGCATTCTCAGGTCAAGATACGCAGAACTACAT
GACTTTGGGTCTGAAATCCTCCCGAGAGCTCTGCATGATCACAATGTACAGGTAAAGCTA
CTATGTGAGCTTCATTCATTGTTTCTGCTAGGGAGGTAGCACTGCATGAAATGCAGTCTA
TAGAAACGATTTCCTCTGCATTGCACGACCATTCATCTGACACTATCTTTGTCAGGCATA
TGTCTTCACTGACTACTGGGAGGACATTGGAACAATCAGATCCTTCTTCGATGCGAACAT
GGCCCTCTGCGAACAGGTGACATTCTATTTTTGTTTCTTCCAAGTTGACTTGATGTTATC
ACAGAAGTAGTTAGGCTTAAATCATCTGGTAAATGATAAAGTTGCATTGAGAGACTTCAA
GTAACATAATCTCAATCTTCTCTCACACATTTTTTTATTTTGCAGCCTCCAAAGTTTGAA
TTTTATGATCCAAAAACCCCCTTCTTCACTTCGCCTCGGTACTTACCGCCAACAAAGTCA
GACAAGTGCAGGGTACGTGTTAGAATGGACCTGCTATTCAGACTACTCCATACAAGCATC
GGCGGTAAGCATCTGATACGGATTCTGATACGGATTCTTTTGTGCGCAGATCAAAGAAGC
GATCATTTCGCACGGCTGCTTCTTGCGTGAATGCAAAATCGAGCACTCCATCATCGGCGT
TCGTTCACGCCTAAACTCCGGAAGCGAGCTCAAGGTATGGTTTTCACCACCGAATTAATG
CATGTGGTGCATGTCAGCTATAAAAACCATCATGCGTCTGAACGCTGTCGCTCTTCCGAA
TGGTGTTTGTTCGTTCTCAGAACGCGATGATGATGGGCGCGGACTCGTACGAGACCGAGG
ACGAGATCTCGAGGCTGATGTCTGAGGGCAAGGTTCCCATCGGCGTCGGGGAGAACACAA
AGATCAGGTAAAGAGAGACTGATCTGTACCTCAGAAACAACACGGTGCAAGTGACACATT
ATCTCTTAACACTTTTTGGGTGGACACATTGCAGCAACTGCATCATCGACATGAACGCGA
GGATAGGAAGGGACGTGGTCATCTCAAACAAGGAGGTAAGATACTTACTCTCATTCAGGG
TTGAAGTTTGGTACTACCAAAATTTTGAAGAAACAACACCTGTCTCTGAAACCATGCCAC
TTTGTGCCATTTCTGTCAGGGGGTGCAAGAAGCCGACAGGCCGGAGGAAGGGTACTACAT
CAGGTCCGGGATCGTGGTGATCCAGAAGAACGCGACCATCAAGGACGGCACCGTCGTGTA
GGGCGTCGCCGGGTCGGCGCGACGGGGTTCTGCGACAACCTGTGCGCTGCGTCGGTCGTC
ATCATCTTCTCAAACTCCGGGACTGAAGAAGTGATCCGGGGACGGGAGACGTTTGAAGCT
TGAATGACTGAGACTGAAAGTGAAGGCGCAGCAGAGGCAGGCAGCATTAGTAGTAAGTAG
TAAGTAAGTAGCAGTGGAACAAAGTAATAGTCGTTCGTTTTTCCCCTGTAATAAATAAGA
GGCTGTGTGTTGAGGTAAAGAAAGTGGCAGCGAGCAAACAAACTCAAACTCCCGGGGGTT
GTTGGTGTAAATAAAACTCTTTGTCTAGACTTGTGAAATTTTCAGAGGGTTTTCCCGCTG
CCTCTGTCGACCGACATTGTCACTTTCGAGTGGTGGTTGCTTTATCTATGAAATGGGGCG
AAAGCCTATTTACCAACTTCCGTTGCGGGGTGCCGCCATCTTCGAAGGTGGAAATGGCCA
GATACCGTGAGGAACTTTGAATTTGAGAATGACTCATGCGCATACTCCCTTGGGAGTTTG
GATGCCCTTCTGTGGCAACTCCTAAACCAACCAAGGGAGTTTGGATGCCCTTCTGTGGCA
ACTCCTAAACCAACCAACCGTAATTAAAAGCATCTACAGCCGGACACCCTAAACGGCTCT
ATCAATGACCGGTCAAAAGAAATGATCCCGGAAATTTCAGTTTAGCATCATGTTTCTTAA
AGTTTGGTTGTAATTGTTCACTGCCTATCTTTGAGTTGTGAACCTCGAGCTTATGAGATA
TTTTTCTTGTGCTTATGTATGCGATTTTTTTTTACTTGAATGCAACTACGAAATGGAAAC
ATGCCAGTCCGTAATACGATGGCATTTAAGCTGTACTGGTTGGAGCTTTTGATATATAAA
AAAGAAACTATGTTGATGGGCCAAGCTGATTGTTTTGATTTACAAACATAACATTTGAGC
TACCATTGATAATAAAATGTTATGATGCTGAATTACCTCTACTCGGGACTGAACAAGCGA
GTGACCCAGGGACAGTAGACGTTCGTGTAAGCAAAACTCTACTAGACTTTTGTGATTTTT
TGGGGTGGTTCCTGTCATGATGGGTGATTGTTTTATCTATAAAGCGAGACGAAAACTTAC
TTCTGAGACGTTGCCATTTTTGCCAGCTATCAGACAGTTCCAGAGTACCAGCATCAGTGC
GAATTAACATGGCCGAGTATCACGGCATGTTAGCCATCGAAGGTAAAAATGACCGCATTC
TGGAAAAAAATGAAGCACAAAGAGAACAACGAACTCTTGGGGGTGTTCTCTCCTCCAAAT
GGCCACCACCGCAATAGCAGTGTTTGCCACCGGAGGTAGAAACAATCGCGTTTCGGAAAA
TCCGGAGCGGAAAAAGAGAGGCGACTCCCCTCCCTCGGTGATTGGTGTCCTCCTTTCTGG
CACCCTTCTCCGGCAACTCCTTGTCAGCACTCCTGATGCATGTGCCGAAGTCACTGAAGA
AACACAAAAGAAGCAAGAGAATAACCAGCCTACTCATGGGCCGAAGTCACTGAAGAAACA
CAAGAGAAGCAAGAGAATAACCAACCTGCTCATGGGCCGTCGGACAGGCCCACTCCCGAT
CACAAATTACCCCAGTGACTAGCAAGCCCATACTCGGCGTTAAGGCGGGTGTAACAGCTC
GGCCGTTATAAGCCGGCGCAGTAGATGTCTCGGTGGCGAAGGACGGATGGCTTCTGCCAG
GCGCGATTGCGTGTGTGTGTGGTGGTGGTAGCTAGCTGTATGGTGGATGGATGATTGTTG
TAATTCGAATTCCAGTTGAATCTAGATCTTAGCTAGTTCCTTGTAGGAAATACTTATGTG
TGGCTTGCAACATTTTATATATACTACATAGTTTCTGGAATGGTTTGCCTCAATATGGAA
TTTACGGATGCACTTGAATATTGCTTGGAATACATGAATGGAATATAGTTCATGGAAGCC
GGTACATATATGTTGGAAAACAGTATTTATTAATGCTGGAATATTTATTGTACTGAATGT
ATATTTGTCCGGGCACAACATATTATGAAAGCCAGGTTGTTCATGGGATTGGCTCCATGA
ATTGATAAAGCCTGTGAATTTGAATTATAATTCAAATTCAGCGTGCGACTCACACGTACA
TGCTTATGGGACATATTGCGGATGAGACTCCTTGATGGTTACTCATGATCGTGGTTGGTT
AAGTTAACCTGGAGTCCTCACTTAAACAGATTATATCTGGACACTTATCTGCAATTTATA
CAGTTTAAAATAAACTGGAATAGCACTATATAAAGGTCCCTAACCACTAGCCTCAAAAGA
TCATTGTGAGCGGAACCACGGAAAAGGATCGAGGAATAGGGGTTAGACCGTGTGCGTATA
TCGCTTACACGTGTGGCATGACAGCTGATGGCCGACCCACATGTGAGTGGGTGTAAGCGT
GAGTGAAATGCATGGAGTTCTTTTTTTTGCAGAAAACCGCCTGAGGTTTAGTTAAATGTT
ATAAATAAGCCCTTGCTGTGTATGCTAATAACATCGGAAAAATAAAGTTAGGTGTTGTTT
AGGTGAATAGAATACGCCATTGAATGGATATTCAATATGGTATCGACAAGTTAAATAGCA
CGCACGCTAGCCACGCAGACTAATAGTAAGTACTTTATGTACAACAGTTAGCTAGAAACT
TACTGATTCGGCCGGCTGGGTGGTGGTTGATGCCGGGGCAGCCGCCTCAGCAGGCTCAGG
GGGAGTTGTATCCTCCTCGATGTAGTCGTCCGCCTCNNNNNNGAAGAGGCGCGGGCAGAC
GTGACCTGGCACGTAGGGCTCGTTGCAGTTGAAACATACACCCTATCGGCGACGCTCGAG
TTGTTCGGTCGGGGTTAGCCGGAGGAACAGTCGAGTCGTTGCCGTGGCGGGAGTTCCTGT
CATCGGCTGGGCCGGCCGGCTGGGTGCATACATGGCCGGGCGAGGGGGTGGGCGAGGTGC
CCGGGTCGGGAATGCCTGCTGCATGCCCACCGCTTGTTGCTCGAACGCACGGGCATAGTA
CATGGCCATCTGGAGGTCCTGCCGTCCCCGCATCTCGACGGGGGTGGGCGAGGTGCCCAG
GTTGGGAAGGCCTCCGACAAAGAGCTCGGCCCGTTGGAGGGCCGAGACGCCAGGAGCGTG
GCAGGCCAGCGCCTCGAAGCGGTTGGCAAAATCCTGCAGCGAGGAGAGGAACGGAAGGCG
TCCGAGTTCCGCCAGCCGGCTACCGCGGACGTGTACACCGGCTCGGTGAGCCAAGCCGGC
TGCGGAGACGGTGATGGAGGGAACCACACCGCCTGGATGGGCGCGCCCAGAAGTGGCGGC
GGCTCGCTTCACGGGGAGGTGGTCCCCTGGTGCGTCGCGGACGAGAGGAACAGAGGCGGC
GCCACGGTGGGGAAGAACGCAACAACCGGCTGCTGCGCGTAAGACCCCGCGAGGAGCGAT
CGGATACCTGCCACAGCGTGGCCGAGCACCAGAAGCGCGGATGTCATCTCCATGGGTAAG
AGGACGAGGCCGACCGAGATCGACGGGGGCCAGGTGGTCGCGGCAGGCGGTCGAGGAGGC
CAGCAGCAGGGGTTGGTGACCAGCGGAAGCCTTGGGTTGGGTGGTGGTGTCGACATGGTC
GATCCTGGTCTAGCTGATACCAAATTGGTAGGAATATGATACCTACCAGACCTAGATCGC
AGGT
