| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_135829
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_5068 |
2 |
3105 bp |
MLOC_5068.1 |
Available |
Available |
LOC_Os01g65440.1, FRAME:-2, EVALUE:3e-18, 13101.m07069 protein universal stress protein domain containing protein, putative, expressed |
CDS Structure of MLOC_5068
Contig Sequence (4309 bp)
>contig_135829 4309 assembly3_WGSMorex_rbca.fasta
GGGGAATCGCTCCGCCATGGTTTCGGGGAGGAAGCCGGTGGTGGAGACGAGGGAGATGAG
AGAGAAGAGGATGATGGGACGAGTGTGCGGCGAGCGGCGGCGACGCACGACTTTTATAGT
GGGGAAGGGACAGAAGCGGTGTATACGCATGACGGGAAAGGGTGGGACGCACGGCGGCAT
GTCGTCACTGTGCCGTCAGACCTTAAAATCCGGCGCATTGAACCGGCGTGAGAGCCAAGG
CGATGAGGAGGACGAACATTCTCGACGACGTCCAGTCTCGTTGACTTGACGGATCCACGG
TGAGGGATTTGTCGCGCTTTGTTTTTGTGCCAAATTTCTTTCTCTCGACGCCCCCGACGC
CCTGCGATCGATTTGGGTCCAGCGACGCTTATTTCAGTCTAAATTGACGCTAAAAAAACG
AGAGGGTGTTGATGGGGGCGCGCCTCGAGATGCTCTCATGAGCATGGCCTGGACCGGACC
TCCCATGGGGTAGTTTGACTGGCCGAGTTATTGCTACTGCCAGCATGGTGGTGATGACTG
CGGAGGCTATGTAGCATCTGGCTGACTGACTGTCTCTCCCAGCCAACGTATCATTTCGAG
TAACATAATGCTGCTGCAGTGTTACCAGTCTACGGCGTCTGTATGTAGGAAGCAGGCCAA
CTTATTATGGTCCCTGCCTAAATAGCTGTCGCGTGTTCGTTTCCTTGTCCCGCCCATTGC
GCAGGATCTTGATCAAGTTAGCCGCGTCGTGAATCTTACCTCACCAGTACGTTTATTTCT
TACTTCCTTCGTCCCATAATATAAAAGCATTTTTATCTAAATATAAGTCTTTTTAAAGAT
TTCATTGGAAGACTATGTAAGGAGCAAAATTTGTAAATCTACTTTAAAGTATGTCTATAT
ACATCTGTATGTAGTTCCCTAGTAAAACATCTAAAAAGACTTATATTTAAGAACGGATGG
AGTACATTATTATAAAAAACGCTTTCAGCAAAATTAAACAAATGTCCTTCAAGGATGGAT
TCAACGCCTTGCTTGCAGCTACCTAGATTTCGGTTAGGTTTCATCGCCATCCGCGCCTTC
GCGTAGCAATCGGGTTATTGCCCGGTTGCTCCCCAGCCGACGACCATCATGCCACGGCTG
TGCTGGGATTCAGTGAAGACTATGATGGCCGGGGCCATGCCTAGCCAAGACTACTGCACC
TCCTGTTCGTACACTTGCGGCCAATTACAGCAGGCCCCGGCCGAGGTCACTTGTTCCTTG
GATGCCAGTGCCACCCCGATGCCCAAACTCTCTGCTTTCGGATTTCCAATTTTCACTTGA
CACTGCAGTGACTTTGTTGGGTGCAAACCATGCAGCAAAGAAAACCTCAAACATAAGTAT
TTGAGCAAGCAAGACACACACCACAATACTTGGGAGAACTTTTTCTTTTGCCTTTTGGGC
TAACAAATTTCAGAATCAACCTTATTTTTTTTTTAAACTGATCTCTTTTGATGATGTCAA
CATCCCTTACGTGTGGGTTGCACGAAAAACGTCAAGGCCCCTGGCGTCTAGCCCGTAGCC
CGCACGACCAGCTGAAACATCAAGGCACCCTAACGTGCCCTAGTAAGTGACCAAATGTCA
AGGACTATTCGTCTGGTCCCAACAGATCACATAACTAGGCTATTCGTCTGGTCCCAGCAG
ATCACATAACTAGTTTTTTCATAGTATGTGTCACGTCATCCAGACATCTTAACGTTTCTT
ACCAAATGCTAGGTCATTGGCGTTTGGTATCAAACGCCAGGTTCCTTGACGTAGGACCAG
GCCCTTTGTCACGTCACGGGTCAGCCGGTCGTACAAATTGTATCAGAGGCAAAAACTTGG
CGTCTTTCATGCAAATCAGACGTTAGATATGTTGGATTCATAAAAAAATCGGATTCATTT
TTTAAGTGCTGCAATTTTGGATTTTAACGTCATCAAAAGAGGTCAAAACATTTTTTTGCT
CCAATACTAGTATGTCTTTTGTGCATCACAACACGACGGTACTACATCAGGTACATATTA
CAATCTTGCAGGAGAAGGAGAAAGTCTAGCAGCAGAAAAGATAAAAAAAAAGGGGGGGCA
CAAATTACACGCACTGAAAAGACGGCAAGGCTATAGGAGGGTCAAATCCTAGGACTCTGT
GTGGGGCTTTACATATTACAACACGATGGGGGCAGCAGGAGCAGCACGATCCACCGCAGC
GACACACGAACGACATGGCCGCATGCTGCACGCACGCACGCACGCACGGACATCTTTTTT
TATTTTTTATACTCGATGGACGGGTTAAAAAACTCATAGAATGACAGATACGTTGGTGTA
AAATACTCAGATCACGCAGGAGCTAGACAGACAAACTCAGCAGCGAGCTTTTATAGAAAC
ACGGTCGTGGACATGGCGGACGGGACGACGGACGGTCAAGCGAGGAGCCAGAAGTTCTTC
TGCCACCGGGTGCTGACGAGGTATCCGCCGACGCCCTTGCTCTGCTTCCTCACCGCCAGC
GTCAGGCACTCGGCCTGGTTGATGCACTGCTCGACCACCTCCTCCTCCCCTCTGCTCGGC
GCCAAGCTGCAACCACACCACACACACACACACACGTTTCCGTTTCTTCGTTCAGACAAG
GTCTTAGTAGTTGCTAGCGATGACAAGATGAAAAGTTAACCACCTGACTCGGTTTCCACA
TGACACTTTCTACATTGTTGGCAACAATTATAGGAGGATCGCTTTACTTAGTTGAGAGAT
GTGGTGGCTGAAGGGGGACAGGGAAAAGCATCTGGGATTTATGGACGGCACATGGATCTG
CAGCAGTCCGGCGGTGTTTTCCGGAAAGACACACGCATGGACCCTGCCGTCGAACGGGTG
TGAGCCCGATCGAGCCTGCCCAGGAGCCGTCGGTTGTGAGCCGTGACTGGGCCGGGCCCG
CTCGTCCATCAATTATCATAAAAGGCTTCAAATCTGCTTGCCGGTAAGATGAATCTGCTG
GTGGTGGTTTACTGCGTTCTTGTCATGAAAGGATAGGCTCGAGGGAACTGATCTCATACA
CTACCAGTACAGTACAGATGTAAATACAATGCAGACGTAGCAGTGCAGCTGAAGTTTTTT
GTTGGGATTCGGGATCCAGATATGAATGCATGGCTCTCAACTACCACCTTTTAAAAAAAC
TACACCGTACAGGCTGACAACCATGATAGATTCTCCCGGCCGGTAGGTTTCCATCTACTC
ATAGCTGTTGACCTCAGCCTCACATTTTTAACACGCAACAGTGATAAGCTAGATACTGAT
AGATGCAGTAATGCATGTTGTGGTGAGAATGATCAATGTATGCTTACCAGCTTAGCCAGC
AGAAGGTAGAGGGCTTGGTTTGGCTGAGCACCAGCACGGAGGCCTCCAGCTTCTTCACCT
GGCTGAGGATGGTGCCCAGCTTGGGGCCTTGGATCACCAGCGCCTCCACCTCCACCTACC
CATATACACAGCACAACACCCACCTCCATGGCATCAGGACAAACCAACACTTCATGCAAC
GTACGGCTACACTGAAGTACTGGTACTCGTGTGGTACTGCGCTACATTGAGGCTCTGACT
TTTGATTCAAGCAACCAAACCAAAGCAAATCACGGCCGGCTGGCTTGGGTTTCGTGCGTA
GTAATGCCCTGGTTTACGGCCGGTTTGGGTGGGATTTTGCTTGTGGTAGTTGGTGGGAGA
CCCCGCCGGCTTGTTTGCTTGCTAATCCTGACCTTTGGGCCTGCCGAGATCCATCCCGCG
GCCATGAAAAGTGGGCGGTGATTCCCTTTTTATGTCTATGTTTCTGATCTGATCTGATCT
GTATAAAATACAGGGACCAACCAGATGGATAGACTCGCCATTTTTATTTTTAACCAAGTA
CTGAAGGTGTCTCTGCCTCATCATTTTTTTAACCAGGAAACCGAAACTTTACGCTATTGA
CTCTTGGCGGCAACACTATGCTTGCACATTTTCCCTAGGCCTACTTTGCATGAGCTACTA
GTGAACATGCTTGCAATTTTTGATAATGGAACATGCTTGCATGACTACATGTATCGACAC
ATTTTCTCTAGGTATATTTTCTATAAAAGTACAAGTAAACATGCATGCATGTAGTACAGC
GAAACTCCTTTTCGATATTATAAGAGCAAATACAATAGAGCTGAGCCAGGCTATAAAAAA
TAAACTAATATATTTTTATTTAGTTAGAAGAAAGAGAAGAGGAGAGATAAGGTAAGCGGA
CTCTTAGCTAAGAGTCAGCTCTAGCACGTGCTTCTAGGCATTTTGTGAG
