Contig Data
morexGenes
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Map Locations of contig_135732 (3430 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_135732

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_4967 1 2289 bp MLOC_4967.1 Available Available LOC_Os01g06470.1, FRAME:+1, EVALUE:4e-115, 13101.m42764 protein expressed protein





CDS Structure of MLOC_4967






Contig Sequence (3430 bp)

>contig_135732 3430 assembly3_WGSMorex_rbca.fasta
TTCCAGAGCCATGACTTGGCTTCGAGATCTTATGGGTTTCAACTCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGGCTTGGTTGTTGTTGTTGTTGTCTGAGATGCATAAATGACATGG
AAACATTTACCAAAGTTTACCAGAGTGACATGCATGGTTTTGTTCATTACTGCCAGTGAT
GAGTTATGTGATCTTTCAGGGACGAAGAGTTAGCAACTGAGGTGGCATGGGTGGTGGTAT
ATCTTTCAGCACTTTCAGAAAAAGCTATCAGCTTAATAGTACGAAGCCATGTGCCTCAGT
TGCTGATTGGACGCCTGCTGGCATCTGAGAACTTGCAGTTGCTCATTCCGGTATTGTCTA
TTTGTTTTCTCTCTCGATCTCATAGTGTTCCTTTCTCTTATTAACAATTTCGGTGCTTTC
CCTGGAAATCCTTATTGCTGATAATTTTCATTGTACTTAACTAGTACTGGTCAAATTGAC
CATATCTTTTAAGAGCAACACGTCATAGTTCAAACTCTAAACTTTCATAACCCTGTGTAG
AGCATGTCTGTCAATTTGGTAACCAATGTAATAATGAGCAGGTAATGTCTATAGAGCTGA
AGGCTTTTATTAGGACGTGTATTAATTATGATTTGCAATTAATATATAGCTTCTCTATGC
ATATTTTCTCAGTTATTGTAGCATTCTGTACTTTTTATAAACATCCAATGATCTATATGA
TGTTACTGTGGGGCAGTGTATGTGATTTCACAACACAGGCAAACTGACACTTCTACGACG
AATCAGGTGCTTCGTGGTTTAGGGAATCTTGTAGCCGGGGATGAATACATGGTTAATTCA
ATCCTAATTGTTGGAAACAGCATCACAGGTTAGCCAATCATCCTTTTGTCTCCAGTTACA
TAACAGCACTGATGATACTCATCATGAGCTACAGTTTGCAAGTACTAACTGAATATTGCT
CTCAGATCAAGCTTTATCAAGTCTTATAAAATGTTTGAAGAGTGACAATAGGGTTCTCAG
AAAGGTCCGCTTTTACTCGCTGGCTCAAGTTTACTTCATCTAACCGACATATACTGTATT
ATTTGATTTATTTATGCTTCAAATTTGTGGACTGCTTATGTAGGAGGCTTCATGGGCATT
GTCAAATATAGCAGCAGGCAGCTTTGAGCACAAGAAATTGATTTTCACCAGTGAGGCGAC
ACCTTCGCTAATACACCTCCTGACGAGTGCACAGTTTGACATTCGCAAGGAAGCAGCTTA
CACCCTGGGCAATCTGTGTGTTGTTCCAGCAGGAAGTACTGAGCCCCCGAACATAATCAC
CGAACATCTAGTCTCGATCATAAATGGTGGAGCCCTCCCAGGATTCATAAATTTGGTCAG
GTCTGCTGATATAGAGAGCGCAAGACTCGGTCTTCAGTTCCTGGAACTGGTGAGGGAATC
TTACCGCCTTTTTAGCTATTCTAAACTCATTTTCTAACCTGGTTAACTAGTTACATCTGA
AATGTAAACTGTCTCTTCAAGTTGCGTGTGGGTTACTCTCGTTGTATCGAGTTTCTTCAG
TTACGTTGAGATCCAAATTACCATAATTGCAGGTGATGAGGGGGTATCCCAATGGACAGG
GTCCACAGCTTGTGGAGAGGGGGGACGGCATCGAGGCCATGGAGAGGTTCCAGTTCCATG
AGAACGAGGCGATGAGGAACATGGCCAATGGGCTGGTCGACAAATACTTCGGTGAGGATT
ACGGCCTCGAGTGAGCGGTGACTACCGCCGCCTCGCCAATCTTGCATCTGTTTGTGAACC
CAGCAGCAGCTGCTCGTGTACTCAAACTGTAAAATGCAACTTTTTTGTAATCGTGGAATG
TATACAAGACTGTCTGAGGTAGCGTAGTTGCTGTGTAACTTGGCCATCGCCATGGACGTG
TGTGGCGATGCGGTTGTTGTAGCTGGAAGCTTGAAGTGAGCTGGGTAGCTACCGTAGTAC
AGTGTGACCTGTATAAGAAGAAAAGATTTTGAGTTTTTGAGTTATACTCCCTCTATACCT
AAATATTGTTAGTTAGGGAAAATTAGTCTAGTTTTCCCCAACTGCAATTATTTAGGTAAA
CGCTTGCCGAAAACCTTTGCGACTATCTTTGCCTAGTTCCAGACCGTGTAGATGGGATAA
GCATTCGTGGCCTTGTGCTTTAAGAAGAGTAGAAGGCAACACCTTCTCAACAAGGAGATC
TTCCATTTCAAAAAAGGAAAAAAAGAGATCTTCCTGCACGAGCTCATCTTCCACACCAAG
TCTCGGGATGTAAATGGTGTTGGGACCCACTAGTTTCATATATGCCATCCGCCTAGTTTC
ATATATGCCATCCACCGAAAAACCTAAAATTAACCGGAATATATGGACAGCCTAGAAAAA
CCCAGCGCTAGTCCACAATTAAGAAGGGCACCACCATCAGTCCATCGCTGTCATCTCCAC
CGCACCACGCCGCCACCTCCCGCTTCCAATCCTTCCTCCCCTGCAGCGAGAACACCTCCG
ACTGCAGGTAGCCGAACCCGTCGCCGGCGTCGGGCCCGTAGTAGAACTGCGTCGCCGCGC
ACGCGCAGTCGTCCAGGCATGCCTTCTTGCACGCCTTCTCGTCCACCCTCTCCATGGCCC
GCATGCCCGTGCCATGGGCGTTGAAGTAGGCCGTGTCCGGCAGCGACACCAGCCGGTGTT
GAGCGCGCCGCCTCGGCGATGACGAGGAGCTGCACGACGTTGGCGGTGGATTCATCGGGA
CGAAGCCGTGGTTGGGCCTCCGGAAGTTGTCCGCGTCGGGGCAGCTGCACTGCGTGTCGT
TCGTGCACACACCGTACGCGCCGCAGACGGTTGGGTACGCGTAGCCTCCGTCTGGAAAGA
GGCACAACACGTCGTACACCGGTGCCCAGCCCGAGCCGCAATGCCACTTGTAGAGCCGGA
GGTGGCCGTCGTGCTCCAGACGGATGTACTGCACGGTGCCCGCCGCGACGGTGGGCAGCT
GTATGACGGCCACCGACGGAGGTCCGGTCCGGGCGGAGACCGTGAGGCTGCCGTTGGTGT
ACGTCGCGTAGGCGCCGACCGCGGTCTCGCCGCCGTGTGCCGTTGGTTCGCGACCCGTCA
GCGCGCGTATGTACATACACGCAACATGGCGGCGCCGACGGGCTGTGCCGGTGGCCAGCT
CATTGCCCGCCGTACGCATGTGCTTGCGCATGTACATCGTGTACATGGTTTTCTTGTAAA
TGTTCCTCGAGCTGAATCTGGAGGTTTAGTAGCCGTTATTTAAACTTTATTTGTTATGTA
CACTAGTAGAAAATGATCCATTTGTCCCTATTCGAGAGGCCCATTAGCCCCGGTTTCGGA
ACCGGGAGTAAAGGGTCGGGACTAAAGCCCAAAACCTTTAGTCCCGGTTTGCTTACCAAC
CGGGACAGAA